prot_A-nodosum_M_contig1167.18.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1167.18.2
Unique Nameprot_A-nodosum_M_contig1167.18.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length248
Homology
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: D7FHZ4_ECTSI (PPC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ4_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 2.230e-58
Identity = 109/193 (56.48%), Postives = 132/193 (68.39%), Query Frame = 0
Query:   60 SPLVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQ--------------KADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRATVHTTAEVVIGDAPALAFSREMDPHTGFKELVISG 238
            S +VCYA+RL PGEELKG LAEF +++ IRAGFIVSCVGS+RDV LRLAGAE P A  +  P+               +PQ                +       +++++EQ MLRTG DARFE+ SLVGTLSP+GLHLH ++ DE GA+ GGHLVRATVHTTAE+VIG A +L FSREMDP TGFKELV+SG
Sbjct:   24 SSMVCYAIRLPPGEELKGVLAEFTSHKKIRAGFIVSCVGSVRDVSLRLAGAE-PLAGCS--PSSXXXXXXXXXXXXXXAPQENFTAGSHXXXXXXXXQLQEYHQHRREEEEQPMLRTGPDARFEICSLVGTLSPEGLHLHASLADEKGALCGGHLVRATVHTTAEIVIGVASSLEFSREMDPRTGFKELVVSG 213          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: UPI0019954515 (DNA-binding protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=UPI0019954515)

HSP 1 Score: 121 bits (304), Expect = 2.300e-31
Identity = 73/179 (40.78%), Postives = 95/179 (53.07%), Query Frame = 0
Query:   62 LVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVISGR 239
            +  +ALRL PG++LK  L  FA  + ++AGFIV+CVGSLR V LR A  + P                                             +LR   D +FE++SLVGTLSPDG HLH+++ D  GA  GGHL+    ++TTAE+VIG+A  L F RE+DP T FKEL I  R
Sbjct:    1 MTVHALRLHPGQDLKRELDAFAKAQHLQAGFIVTCVGSLRKVALRPANLQEP---------------------------------------------LLR---DQKFEIVSLVGTLSPDGSHLHISLSDSTGATIGGHLLEGNEIYTTAEIVIGEAEHLQFHREIDPVTTFKELTIKKR 131          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: A0A7R9T756_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T756_MICPS)

HSP 1 Score: 115 bits (288), Expect = 2.310e-28
Identity = 68/177 (38.42%), Postives = 91/177 (51.41%), Query Frame = 0
Query:   62 LVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRA-TVHTTAEVVIGDAPALAFSREMDPHTGFKELVIS 237
            +  +A RL PGE+LK AL  +A +R +RA F+++CVGSL  V LRLA + R   +                                                D RFE++SL GTLS +G HLHV+I D +G V GGHL+    V TTAE+V+G++    F+REMD  TGF ELV+S
Sbjct:   17 MEVHAFRLTPGEDLKKALCAYAASRKLRASFVLTCVGSLSAVTLRLANSARDGKNEVV-------------------------------------------SLDERFEIVSLTGTLSANGAHLHVSIADFEGNVVGGHLMDGCVVFTTAEIVLGESATHVFAREMDARTGFDELVVS 150          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: UPI001FE606CD (DNA-binding protein n=1 Tax=Spirosoma rigui TaxID=564064 RepID=UPI001FE606CD)

HSP 1 Score: 108 bits (271), Expect = 3.710e-26
Identity = 68/181 (37.57%), Postives = 91/181 (50.28%), Query Frame = 0
Query:   60 SPLVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRATV-HTTAEVVIGDAPALAFSREMDPHTGFKELVISGR 239
            +PL  Y+ RL PG++LK  L  F     I AG I++CVGSL DV LRLA  E+P+               ++G                                   FE++SLVGTLS +G H+H+++ D  G   GGHL+   V +TTAEV++G  P+L F RE DP  G+KELVI  R
Sbjct:   20 APLQTYSFRLRPGQDLKEQLEAFVRQERIGAGAILTCVGSLTDVSLRLANQEKPTI--------------WKG----------------------------------HFEIVSLVGTLSANGSHIHLSVSDSTGRTLGGHLMAGCVIYTTAEVLVGVMPSLDFVRETDPAFGYKELVIRKR 152          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: A0A7C4ZXC1_9CHLR (DNA-binding protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4ZXC1_9CHLR)

HSP 1 Score: 107 bits (268), Expect = 5.280e-26
Identity = 66/179 (36.87%), Postives = 91/179 (50.84%), Query Frame = 0
Query:   62 LVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVISGR 239
            +  +A+RL PG+++   L+ F     +RAGFI++CVGSLR   LRLA      A+ T           YE                                   +FE++SLVGTL  +G HLH+++ D +G   GGHL+    V+TTAE+VIG+A AL FSR  DP TG+ EL +S R
Sbjct:    1 MQLFAIRLRPGQDVGLELSRFVRENGLRAGFILTCVGSLRQAALRLAN----KAETTL----------YED----------------------------------KFEIVSLVGTLDAEGYHLHLSLSDGEGRTIGGHLMEGCLVYTTAEIVIGEADALVFSRPFDPETGYPELEVSQR 131          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: A0A418M271_9BACT (DNA-binding protein n=1 Tax=Fibrisoma montanum TaxID=2305895 RepID=A0A418M271_9BACT)

HSP 1 Score: 108 bits (270), Expect = 7.060e-26
Identity = 68/184 (36.96%), Postives = 90/184 (48.91%), Query Frame = 0
Query:   57 SGPSPLVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVISGR 239
            S  SP+  Y+ RL PG++LK  L      + I AG +V+CVGSL DV LRLA  E PS               ++G                                   FE++SLVGTLS +G HLH+++ D  G   GGHL+    ++TTAE+VIG  P L + RE DP  G+KELV+  R
Sbjct:   28 SARSPMQTYSFRLRPGQDLKQQLDALVQQQRIEAGAVVTCVGSLTDVTLRLANQEGPSV--------------WQG----------------------------------HFEIVSLVGTLSVNGSHLHLSVSDSTGRTLGGHLLDGCRIYTTAEIVIGVMPDLVYVREPDPTFGYKELVVRKR 163          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: A0A1G1T601_9BACT (PPC domain-containing protein n=2 Tax=Hymenobacter lapidarius TaxID=1908237 RepID=A0A1G1T601_9BACT)

HSP 1 Score: 108 bits (270), Expect = 1.110e-25
Identity = 67/178 (37.64%), Postives = 90/178 (50.56%), Query Frame = 0
Query:   60 SPLVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVI 236
            SPL  YALRL PG++L+  L  F   + +RAG +++CVGSL    LRLA  + P+               Y G                                   FE++SLVGTLS +G HLH+++ D  G   GGHL+    V+TTAE+V+G+ PAL F RE DP  G++ELVI
Sbjct:   30 SPLKTYALRLRPGDDLRQQLTAFVQAQHMRAGAVLTCVGSLTVATLRLANQDGPTE--------------YRG----------------------------------HFEIVSLVGTLSTNGSHLHLSVADSTGRTIGGHLLDGCRVYTTAEIVLGELPALEFRREPDPTFGYQELVI 159          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: UPI0019C938FB (DNA-binding protein n=1 Tax=Hymenobacter sp. TaxID=1898978 RepID=UPI0019C938FB)

HSP 1 Score: 108 bits (269), Expect = 1.140e-25
Identity = 67/178 (37.64%), Postives = 88/178 (49.44%), Query Frame = 0
Query:   60 SPLVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVI 236
            SPL  YALRL PG++L+  L  F T   I+AG +++CVGSL    LRLA  + P+               Y G                                   FE+LSLVGTLS +G HLH+ + D  G   GGHL+    V+TTAE+V+G+ PAL F RE D   G++ELV+
Sbjct:   30 SPLKTYALRLRPGDDLRQQLVAFTTAHHIKAGAVLTCVGSLTVATLRLANQDGPTE--------------YRG----------------------------------HFEILSLVGTLSTNGSHLHLAVADSTGRTIGGHLLDGCRVYTTAEIVLGELPALEFRRETDATFGYQELVV 159          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: A0A0P6XDV9_9CHLR (PPC domain-containing protein n=1 Tax=Ornatilinea apprima TaxID=1134406 RepID=A0A0P6XDV9_9CHLR)

HSP 1 Score: 107 bits (266), Expect = 1.170e-25
Identity = 65/180 (36.11%), Postives = 88/180 (48.89%), Query Frame = 0
Query:   62 LVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVISGRG 240
            +  Y LRL PG++L+  L +FA    I+AGFI+SCVGSL+   LR+AG   P A                                              +  + +FE+LSLVGT+SPD  HLH+ + + D  + GGHL   + V  TAE++IGD     F RE+D  TGF ELV+  RG
Sbjct:    1 MKTYVLRLHPGQDLRLELVKFAQENDIQAGFIISCVGSLKRAALRMAGQFGPVA----------------------------------------------SFFEEKFEILSLVGTISPDKPHLHIALSNADAKMVGGHLQGGSLVDLTAEIIIGDLEDKVFRRELDTQTGFPELVVYPRG 134          
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Match: UPI001C401D77 (DUF296 domain-containing protein n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C401D77)

HSP 1 Score: 106 bits (264), Expect = 2.330e-25
Identity = 64/174 (36.78%), Postives = 86/174 (49.43%), Query Frame = 0
Query:   65 YALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSLRDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENRKQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHLVRAT-VHTTAEVVIGDAPALAFSREMDPHTGFKELVIS 237
            +ALRL PG++LK +L +F   R + AGFI++ VGSL  V LRLAGA  P                                                T   A FE++SLVGTL P GLHLH+ + D  G   GGHL+    V+TTAE+V+G + +  F+RE D  TG+ EL ++
Sbjct:    4 FALRLEPGQDLKQSLQQFTQARGLLAGFILTAVGSLEQVALRLAGAHSP------------------------------------------------TIYTATFEIVSLVGTLCPTGLHLHLAVADHQGQTWGGHLLEGCIVYTTAEIVVGTSASFTFTRETDRATGYLELKVT 129          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1167.18.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ4_ECTSI2.230e-5856.48PPC domain-containing protein n=2 Tax=Ectocarpus T... [more]
UPI00199545152.300e-3140.78DNA-binding protein n=1 Tax=Phycisphaerae bacteriu... [more]
A0A7R9T756_MICPS2.310e-2838.42Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
UPI001FE606CD3.710e-2637.57DNA-binding protein n=1 Tax=Spirosoma rigui TaxID=... [more]
A0A7C4ZXC1_9CHLR5.280e-2636.87DNA-binding protein n=1 Tax=Anaerolineae bacterium... [more]
A0A418M271_9BACT7.060e-2636.96DNA-binding protein n=1 Tax=Fibrisoma montanum Tax... [more]
A0A1G1T601_9BACT1.110e-2537.64PPC domain-containing protein n=2 Tax=Hymenobacter... [more]
UPI0019C938FB1.140e-2537.64DNA-binding protein n=1 Tax=Hymenobacter sp. TaxID... [more]
A0A0P6XDV9_9CHLR1.170e-2536.11PPC domain-containing protein n=1 Tax=Ornatilinea ... [more]
UPI001C401D772.330e-2536.78DUF296 domain-containing protein n=1 Tax=Anthocero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1330.80coord: 63..244
e-value: 2.1E-36
score: 126.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..159
NoneNo IPR availablePANTHERPTHR34988PROTEIN, PUTATIVE-RELATEDcoord: 159..238
coord: 60..117
NoneNo IPR availableSUPERFAMILY117856AF0104/ALDC/Ptd012-likecoord: 64..113
NoneNo IPR availableSUPERFAMILY117856AF0104/ALDC/Ptd012-likecoord: 164..237
IPR005175PPC domainPFAMPF03479PCCcoord: 65..215
e-value: 3.7E-24
score: 85.2
IPR005175PPC domainPROSITEPS51742PPCcoord: 59..237
score: 32.526867
IPR005175PPC domainCDDcd11378DUF296coord: 65..214
e-value: 1.31487E-24
score: 92.2634

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1167contigA-nodosum_M_contig1167:143864..144986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1167.18.2mRNA_A-nodosum_M_contig1167.18.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1167 143701..146200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1167.18.2 ID=prot_A-nodosum_M_contig1167.18.2|Name=mRNA_A-nodosum_M_contig1167.18.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=248bp
MPRGLESESRSMLISAPCAEDIVGIDTATSTTTGIASGSQSPPPSEAKRR
SSKWDDSGPSPLVCYALRLWPGEELKGALAEFATNRAIRAGFIVSCVGSL
RDVVLRLAGAERPSADNTAVPAKISSHDGYEGGIPRPSPQHQKADPVENR
KQQQQEQHMLRTGSDARFEVLSLVGTLSPDGLHLHVTIGDEDGAVRGGHL
VRATVHTTAEVVIGDAPALAFSREMDPHTGFKELVISGRGARNREGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005175PPC_dom