prot_A-nodosum_M_contig1167.16.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1167.16.2
Unique Nameprot_A-nodosum_M_contig1167.16.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length291
Homology
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BLAST of mRNA_A-nodosum_M_contig1167.16.2 vs. uniprot
Match: D7FHZ2_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ2_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 5.380e-29
Identity = 63/126 (50.00%), Postives = 86/126 (68.25%), Query Frame = 0 
Query:  112 GEQSPNAPDERAKQRRGRLVPGNLILTSVSVSDLSCKGEGVSSEQDLYLVVKWAEKEARTTIKRSSSNNCSWPGEELVLVVRAKEQLQESVLVELSLWDSNVGHKKPRPNDLIGRDTFSVKHLVKS 237
            G+  P  P  + K+R+GRLVPG+L+LTSVS +DL    +GV S+QD YLV +W E+E RT+ KR S   CSW  EE+ L+VR K+QLQE +  E+ +W+ N G KKP P+ LIG+ +  VKHL  +
Sbjct:  313 GDARPEQP--QVKKRKGRLVPGSLVLTSVSAADLPDTEKGVFSKQDPYLVARWGEQEVRTSAKRDSGKACSWVKEEVALLVRTKKQLQEPI--EIEVWNDNAGDKKPSPDVLIGKGSLPVKHLASA 434
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1167.16.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHZ2_ECTSI5.380e-2950.00C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 113..249
e-value: 4.8E-7
score: 31.7
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 132..237
IPR000008C2 domainPFAMPF00168C2coord: 134..239
e-value: 8.0E-5
score: 22.9
IPR000008C2 domainPROSITEPS50004C2coord: 115..244
score: 9.484268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1167contigA-nodosum_M_contig1167:134578..136521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1167.16.2mRNA_A-nodosum_M_contig1167.16.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1167 134386..143621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1167.16.2 ID=prot_A-nodosum_M_contig1167.16.2|Name=mRNA_A-nodosum_M_contig1167.16.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=291bp
MLLARGTVHLPLTSGDEAHKETEQRGRKIIVEKGASGPVGRLSSGAATDD
AHGLATEVDDVKKKVNGHPADAFEKQIETDGSSNRTVREQGSSGDPVAGS
KEFPNEQPLEEGEQSPNAPDERAKQRRGRLVPGNLILTSVSVSDLSCKGE
GVSSEQDLYLVVKWAEKEARTTIKRSSSNNCSWPGEELVLVVRAKEQLQE
SVLVELSLWDSNVGHKKPRPNDLIGRDTFSVKHLVKSTAGPVSVDASRGA
NASPTHGFDARFRRGSKVYGYDNKRDSRAGRRTTAAASAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom