prot_A-nodosum_M_contig1163.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1163.8.1
Unique Nameprot_A-nodosum_M_contig1163.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length504
Homology
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BLAST of mRNA_A-nodosum_M_contig1163.8.1 vs. uniprot
Match: A0A6H5KM79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM79_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 2.370e-92
Identity = 197/452 (43.58%), Postives = 255/452 (56.42%), Query Frame = 0 
Query:   76 GLTTLSSFNPFINPTFYSTDGNARALRATTPSARF-VLEARQLSPSKRCLTPEHERAALGCESPGPGSYYPLLTAGGFPPPEHWIGVNKTLRTPR----RGFITKPSWGEPSSPARPPDSARSTTSFKTMGRALMVKKGALLSRTTSPRCAWVTGVSTPRGLQSWGDIAQETGLMKNG-RGFDFSPRPQPPNPGRRSSARRGPVHSGEPRATSPDFREVRFLNHDLMKQSAGTANDTPGPGAYDVRPSMSSGTTFAGPR--PKSSRNVTVSTVIARAEWKA-----TGDVVHTTAVGNRYWPCLSPRRSNRLQSPLRGADSPGPAYCLPSDFDLKRPNKHSFSPPRCKPKSRTLTVGKSRKRG-----RLA------GSAGANDLSVLSRAREEMQRHSTEEAEGECGGDNALGVLVNTSMGKGILLQVRPNYVRLVQLPWGLLFTTEVLTH 503
            GLT+LS+ N F++P  Y+T    RA++   P+A    LE+R LSPS RCLTP HER A G +SPGP  YYP   A  F PP+HW  VNK+ +  R    R F  K +WGE + P RPP+  ++        RA + K+      +T+PRC W+ GV+T  GLQ+WGD+A  TG +  G +G   SP  +P       S RRGP+HS E RATSP FRE R+LN DL ++ A  A DTPGPG Y +RP +  GT+FAGPR   K S+  TV+ ++A A+ +A     T    +    G       S   S RL  PL+G +SPGPAY LPSDFD K  NK +F PPRC   + T   G    RG      LA      G   A     L +AR E       ++        ALGV VNT MG+GILL++R + +  V+LPWG+L+TTEVLTH
Sbjct:  110 GLTSLSAGNAFVSPATYTTQPGERAVKEKAPAAVVNTLESRYLSPSTRCLTPSHEREAKGAQSPGPAVYYPH-EAWDFGPPKHWNRVNKSDKPGRMPSSRSFNAKVTWGEATMP-RPPNPVKAAQIPTKEERAWLSKRRGTARPSTAPRCMWLNGVNTRGGLQAWGDVATNTGPIHVGNKGNCASPWDRPTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDLTRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSKAATVNAMVASAKGRAASYEKTSGAKNGMVRGGDRQSRPSTAPSQRLSIPLKGRESPGPAYALPSDFDQKFVNKKTFHPPRC---TGTSPFGTEEPRGTGRSANLAPRADEDGHVRAKQTKRLPKARREASSGPVAKSGRVDAIGRALGVPVNTCMGRGILLRIRADGMTFVRLPWGVLYTTEVLTH 556
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1163.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KM79_9PHAE2.370e-9243.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1163contigA-nodosum_M_contig1163:107572..111126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1163.8.1mRNA_A-nodosum_M_contig1163.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1163 107572..111126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1163.8.1 ID=prot_A-nodosum_M_contig1163.8.1|Name=mRNA_A-nodosum_M_contig1163.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=504bp
MVIFGAHHTAKRFDGVEGTNESPGPGAYSWKSSLTGAPAPRYFARLMEEG
NLRPDGSPVLFTERDSWIRGIMAPKGLTTLSSFNPFINPTFYSTDGNARA
LRATTPSARFVLEARQLSPSKRCLTPEHERAALGCESPGPGSYYPLLTAG
GFPPPEHWIGVNKTLRTPRRGFITKPSWGEPSSPARPPDSARSTTSFKTM
GRALMVKKGALLSRTTSPRCAWVTGVSTPRGLQSWGDIAQETGLMKNGRG
FDFSPRPQPPNPGRRSSARRGPVHSGEPRATSPDFREVRFLNHDLMKQSA
GTANDTPGPGAYDVRPSMSSGTTFAGPRPKSSRNVTVSTVIARAEWKATG
DVVHTTAVGNRYWPCLSPRRSNRLQSPLRGADSPGPAYCLPSDFDLKRPN
KHSFSPPRCKPKSRTLTVGKSRKRGRLAGSAGANDLSVLSRAREEMQRHS
TEEAEGECGGDNALGVLVNTSMGKGILLQVRPNYVRLVQLPWGLLFTTEV
LTH*
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