prot_A-nodosum_M_contig116.64.2 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A6H5L4C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C0_9PHAE) HSP 1 Score: 370 bits (950), Expect = 5.080e-125 Identity = 197/281 (70.11%), Postives = 224/281 (79.72%), Query Frame = 0
Query: 1 MGDRDAPISCLFVSDLPTDITEKDLEKLFAGCHGFDSCRLRKDKNEKDVGFVEFRDSESAEIAKDRFKGHILKGHSIAVCYARAGRKRSRQERTEPRDNDGYTGVSSSGHHR----------TPSGGI----QTSLAGGVGAGYLGMGMSGMGGIHAAQAYGMATPRLMQ----MSAMGLPLRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGDAICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAK 263
MGDRD P LFVSDLP+DITEK+LE+LFAGCHGF+SCR+RKDKNE DVGFV+F D+ESA IAK+RFKGH+ +GH IAVCYAR RKR R ER++ RD DG G S + TPSGG+ T+L+ V GYLGMG+ G+GGIHAAQAYGMATPRLMQ MSAMGLPL LP DAHHTLYVEGIPGD +ERELAHIFRPFPGYISLRLRAKGGR + G++S++ +AICFVEFES YHATIAKMG DYRLDK+DRNS VLRIEYAK+K
Sbjct: 1 MGDRDIPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPIAVCYARPARKRHRPERSDARDMDG--GGDSRNYQSMQXXXXXXXXTPSGGVGGGLPTNLSS-VNTGYLGMGIGGIGGIHAAQAYGMATPRLMQASTAMSAMGLPLGLPSDAHHTLYVEGIPGDVSERELAHIFRPFPGYISLRLRAKGGR-SLGSASANVEAICFVEFESSYHATIAKMGAADYRLDKIDRNSAVLRIEYAKSK 277
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: D7FXN5_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN5_ECTSI) HSP 1 Score: 128 bits (321), Expect = 4.670e-34 Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0
Query: 1 MGDRDAPISCLFVSDLPTDITEKDLEKLFAGCHGFDSCRLRKDKNEKDVGFVEFRDSESAEIAKDRFKGHILKGHSIAV 79
MGDRD P LFVSDLP+DITEK+LE+LFAGCHGF+SCR+RKDKNE DVGFV+F D+ESA IAK+RFKGH+ +GH I
Sbjct: 1 MGDRDTPSHGLFVSDLPSDITEKELERLFAGCHGFESCRVRKDKNEHDVGFVDFLDTESATIAKERFKGHVFRGHPIGA 79
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A835Z002_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z002_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.050e-28 Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 160 MGLPLRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGD----AICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGG 265
MGLPL+LP DA TLYVEGIP DA+ERE+AHIFRPFPGY SLR+R K S+ GD A+CFVEF++ Y A++AK+ DY++D+ D + L + YA+ + G
Sbjct: 1 MGLPLQLPPDASSTLYVEGIPKDASEREVAHIFRPFPGYQSLRIRHK--------ESARGDGAQRAMCFVEFDNAYQASVAKIACGDYQIDRTDPQAGTLIVHYARGRRG 102
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: L8H910_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H910_ACACA) HSP 1 Score: 118 bits (296), Expect = 1.220e-27 Identity = 91/286 (31.82%), Postives = 137/286 (47.90%), Query Frame = 0
Query: 9 SCLFVSDLPTDITEKDLEKLFAGCHGFDSCRLRKDKNEKDVGFVEFRDSESAEIAKDRFKGHILK---GHSIAVCYARAGRKRSRQERTEPRD--NDGYTGVSSS--------------GHHRTPSGGIQTSLAGGVGAGYLGMG----------MSGMGGIHAAQAYGMATPRLMQMSAM---GLPLRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGDAICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKA 262
+ LF++++P ++TE + F+ G+ S RLR+D+NE VGFVEF D +SA A+++F H I + +A + +ER + + + Y SSS G R + SL G+ +G+ MSGM Q Y P S + +L DA TLYVEG+P DATERE+AHIFR PGY+ +R++ K + + + +C+VEFE+ Y+A +A + Y++DK D L I YAK
Sbjct: 46 TALFIAEIPLEVTEAEFRSTFSSEPGYISARLRRDRNENTVGFVEFSDHKSAAEAREQFNNFKFSHNDDHGITIHFAHEHSRNKHRERDDGKHYGSQHYDQPSSSRKGYNXXXXXXDGYGSMRAADVNSRVSLTSGLPLVPMGVSPMMPGPTSLDMSGM------QFYSTVAPNAQFASYVQPQAYSPQLSPDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFN----LCWVEFETKYNAAVALHHLKGYKMDKNDTKGLT--ISYAKT 319
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A6J0KMJ8_RAPSA (nuclear speckle RNA-binding protein A-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0KMJ8_RAPSA) HSP 1 Score: 100 bits (248), Expect = 1.710e-22 Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 0
Query: 164 LRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGDAI--CFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGGRDRDRGGDR 274
LRLP DA TL+VEG+P D + RE+AHIFRPFPGY +RL K + +GD I CFV+FE+P A A+ + YR+D+ +R+S +LRI++++ G R RGG R
Sbjct: 45 LRLPPDASSTLFVEGLPSDCSMREVAHIFRPFPGYKEVRLVTKDSK------HRNGDLIILCFVDFENPACAATARNALQGYRMDEEERDSKILRIQFSRNPGPRPGQRGGRR 151
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A7S0HWY9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HWY9_9EUKA) HSP 1 Score: 103 bits (256), Expect = 4.440e-22 Identity = 97/314 (30.89%), Postives = 134/314 (42.68%), Query Frame = 0
Query: 4 RDAPISCLFVSDLPTDITEKDLEKLFAGCHGFDSCRLRKDKNEKDVGFVEFRDSESAEIAKDRFKGHI-LKGHSIAVCYARAGR---KRSRQERTEP-------------RDNDGYTGVSSSGHHRTPSGGIQTSLAGGVGAGYLGMGMSGMGGIHAAQAYGMAT--------------------------------PRLMQMSAMGLPLRLPGDAHHTLYVEGIPGDATERELAHIFRPFPG--YISLRLRAKGGRGNAGNSSSSGDAICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGGR 266
R P +CLF+ +LP D+T+ LE+ F G GF R RKD+N K VGFVEF + A +D +G +G S + Y+ + KR R+E +P R N+ G P + S GG G +G P + L +LP DA TLYVEG+P DATERE+AHIFR F G Y S+R+ A+ G + +CFVEF++P+ AT + YR+DK + V +I +AK+KG R
Sbjct: 3 RAPPSNCLFLPELPADLTDATLERHFRGFVGFQVARTRKDRNSKLVGFVEFDAVDDAVRCRDSMQGTSPFEGISWHIHYSNNTKGTPKRPREEMEQPVSRMDAQRPAMYDRPNNQXXXXXXXG---AP---MMQSPGGGYGXXXXXXXXXXXXXXXXXXHHGXXXXXXXXXXXXXXXXXXGPMYQPMXXXXXXXXXXPAGSSIPPNYLSAQLPRDASSTLYVEGLPSDATEREVAHIFRRFEGHGYQSIRMLARESSKTPGKNLY----LCFVEFDNPHQATACLHQMQGYRVDKAIEGAGV-KISFAKSKGDR 305
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A1J6IWH5_NICAT (Rna-binding protein 2 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1J6IWH5_NICAT) HSP 1 Score: 98.2 bits (243), Expect = 6.520e-21 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 0
Query: 164 LRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGDAICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGGRDRDRGGDR 274
+ LP DA TL+VEG+P D T RE++HIFRPF GY +RL KG R + G+ +CFV+F +P HA A + YR D+ DR+S+ LR++YA+ G R GG+R
Sbjct: 125 ISLPPDASSTLFVEGLPADCTRREVSHIFRPFVGYKEVRLVPKGSRHHGGDPL----ILCFVDFVTPLHAAAAMDALQGYRFDEHDRDSVSLRLQYARNPGARSG--GGNR 229
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A6L2J5P6_TANCI (RNA-binding protein 1-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2J5P6_TANCI) HSP 1 Score: 96.7 bits (239), Expect = 3.550e-20 Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 0
Query: 131 LGMGMSGMGGIHAAQAYGMATPRLMQMSAMGLP-LRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGD--AICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGGR 266
+GMG++GM AA A A + A G P + LP DA +TL+VEG+P + + RE+AHIFRPF GY +RL K R SSGD +CFV+FESP A AK + Y+ D+ DR+S +LR+++A+ G R
Sbjct: 106 MGMGLAGMDLAVAAAAAAKARDTGL---AGGRPEIALPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR------HSSGDPLVLCFVDFESPAEAATAKDALHGYKFDEHDRDSGILRMQFARNPGVR 235
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: A0A5A7P711_STRAF (RNA-binding protein with multiple splicing n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7P711_STRAF) HSP 1 Score: 96.3 bits (238), Expect = 3.650e-20 Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0
Query: 164 LRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGDAICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGGRDRDRGGDR 274
++LP DA TLYVEG+PG+ + RE++HIFRPF GY +RL K R + G++ +CFV+F SP HA A + Y+ D+ DR+S +LR+++A+ G R GG+R
Sbjct: 128 IQLPPDATSTLYVEGLPGNCSRREVSHIFRPFVGYKEVRLVTKESRHSGGDTL----VLCFVDFLSPAHAATAMDALQGYKFDEHDRDSAILRLQFARYPGARSG--GGNR 232
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Match: UPI001CB91082 (RNA-binding protein 1-like isoform X1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB91082) HSP 1 Score: 96.3 bits (238), Expect = 4.750e-20 Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 0
Query: 131 LGMGMSGMGGIHAAQAYGMATPRLMQMSAMGLP-LRLPGDAHHTLYVEGIPGDATERELAHIFRPFPGYISLRLRAKGGRGNAGNSSSSGDAICFVEFESPYHATIAKMGVVDYRLDKLDRNSLVLRIEYAKAKGGRD----RDRGGDRDR 276
+GMG+ I AA + G L G P + LP DA +TL+VEG+P + + RE+AHIFRPF GY +RL K R +SS +CFV+FESP A AK + Y+ D+ DR+S+ LR+++A+ G R R GG R R
Sbjct: 106 IGMGLGSADHIAAATSKGRDAGLLG-----GRPDVALPADASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR----HSSKDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRMQFARYPGARTGGGARSSGGSRGR 247 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig116.64.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig116.64.2 ID=prot_A-nodosum_M_contig116.64.2|Name=mRNA_A-nodosum_M_contig116.64.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=278bpback to top |