prot_A-nodosum_M_contig115.24.9 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig115.24.9
Unique Nameprot_A-nodosum_M_contig115.24.9
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length667
Homology
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: D7G5I7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I7_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 2.150e-137
Identity = 199/207 (96.14%), Postives = 204/207 (98.55%), Query Frame = 0
Query:   47 MERNPRDRNGMSGAARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERILRK 253
            M+RNPRDRNGMSG+ARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNP+SAVMAAGGDPSQLPKDHVQDDFE XXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKF DEEDADSALKGLMGRWYA RPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLE++LRK
Sbjct:   43 MDRNPRDRNGMSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFEDXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLEKLLRK 249          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: A0A6H5L153_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L153_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 1.060e-107
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0
Query:   54 RNGMSGAARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFD 221
            RNGMSG+ARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNP+SAVMAAGGDPSQLPKDHVQDDF XXXXX   ELSKFGEISEMNVCDNLGDHLIGNVYVKF DEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFD
Sbjct:    5 RNGMSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFXXXXXXXXXELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFD 172          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: A0A835YWK2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK2_9STRA)

HSP 1 Score: 324 bits (830), Expect = 5.370e-104
Identity = 142/198 (71.72%), Postives = 170/198 (85.86%), Query Frame = 0
Query:   56 GMSGAARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERILRK 253
            G +G  RGGAEHLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKPPFSQT+L+ ++YQNP SA++AAGGDP+ + +D   D+FE     VY+EL KFG + EM+VCDNLGDHL+GNVY+KF+DEEDAD+ALKGL GRWY GRP++ EFSPV DFREARCRQ+DEGTC RGGQCNFMHV+ V + V+ YL+++ RK
Sbjct:   13 GGAGGPRGGAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTLLLSHMYQNPASALLAAGGDPNAIDQDAANDEFEDFYEEVYEELCKFGSVEEMHVCDNLGDHLVGNVYIKFSDEEDADAALKGLFGRWYGGRPMVPEFSPVNDFREARCRQYDEGTCGRGGQCNFMHVRHVSKDVVRYLDKVARK 210          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: A0A7S3XMX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMX4_HETAK)

HSP 1 Score: 319 bits (818), Expect = 7.180e-102
Identity = 145/197 (73.60%), Postives = 165/197 (83.76%), Query Frame = 0
Query:   61 ARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPR-LVMSYLERILRKRKG 256
            ARGGAEHLARIHGTEEDKVNCPF++KIGACRHGDRCSRQHHKPPFSQT+LVQ++YQNP SA+ AAGGDP+ +     Q+DFE     V++ELSKFG + E+N+CDNLGDHL+GNVY K+ DEEDADSALK L GR+YAGRP++CEFSPVTDFREARCRQFDEGTC RGG CNFMHVK VPR L    L +   KR G
Sbjct:   20 ARGGAEHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTVLVQHMYQNPASAIAAAGGDPNSIDHRQAQEDFEEFYEEVFEELSKFGAVEELNICDNLGDHLVGNVYAKYADEEDADSALKALYGRFYAGRPLICEFSPVTDFREARCRQFDEGTCARGGYCNFMHVKAVPRGLQRDLLRKFAPKRGG 216          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: A0A835ZC00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC00_9STRA)

HSP 1 Score: 315 bits (806), Expect = 8.780e-99
Identity = 139/192 (72.40%), Postives = 165/192 (85.94%), Query Frame = 0
Query:   64 GAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERILRKRK 255
            GAEHLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKPPFSQTIL+ +++QNP SA++AAGG+P  + ++   D+FE     VY+EL KFG + EMNVCDNLGDHL+GNVYVKF+DEEDAD+ALKGL GRWYAGRP++ EFSPVTDFREARCRQ+DEGTC RGGQCNFMHV+ V R V  Y +++ R+ +
Sbjct:   62 GAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTILLSHMFQNPASALIAAGGNPETIDQEATNDEFEDFYEEVYEELCKFGTVEEMNVCDNLGDHLVGNVYVKFSDEEDADNALKGLFGRWYAGRPMVPEFSPVTDFREARCRQYDEGTCGRGGQCNFMHVRHVSRDVARYCDKMARRAR 253          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: A0A7S3ZUE9_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUE9_9STRA)

HSP 1 Score: 304 bits (778), Expect = 8.620e-94
Identity = 138/206 (66.99%), Postives = 166/206 (80.58%), Query Frame = 0
Query:   49 RNPRDRNGMSGAARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERILRKR 254
            RN RDR    G ARGGA HLARIHGTEEDKVNCPF++KIGACRHGDRCSRQHHKPPFSQT++VQ++YQNP S + AAGGDPSQL    VQ++F+     VY EL+ +GEI E+NVC+NLGDH++GNVY KF DEE +D+ALK L GR+YAGRP++CEFSPVTDFREARCRQ+DE  C RGG CNFMH++   R +   LE+  +K+
Sbjct:  116 RNWRDRE--LGGARGGATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQEEFDDFYEEVYDELAGYGEIEELNVCENLGDHMVGNVYCKFADEEHSDAALKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLRKDLEKRYKKK 319          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: A0A024TD10_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD10_9STRA)

HSP 1 Score: 298 bits (762), Expect = 4.200e-93
Identity = 138/198 (69.70%), Postives = 162/198 (81.82%), Query Frame = 0
Query:   52 RDRNGMSGAARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLER 249
            RDR G   A  GGAEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQT+LV+++YQNP+S V+AA GDP+QL +  V +DFE     V++EL KFG++ E+NVCDNLGDHL+GNVY KF DEE A +A   L GR+Y GRPIMCE+SPVTDFREARCRQFDEGTCNRGG CNFMH+K V R +M  LER
Sbjct:   27 RDRRGD--ATGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRSHNKPVFSQTLLVKHMYQNPLSTVIAANGDPNQLDQKTVDEDFEDFFEEVFEELCKFGKLEELNVCDNLGDHLVGNVYAKFEDEECAAAAHTALYGRFYGGRPIMCEYSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSRAMMIELER 222          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: T0S0M7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0M7_SAPDV)

HSP 1 Score: 298 bits (763), Expect = 6.670e-93
Identity = 134/187 (71.66%), Postives = 157/187 (83.96%), Query Frame = 0
Query:   63 GGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLER 249
            GGAEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQTILV+++YQNP+S ++AA GDPSQL +  V +DFE     VY+EL KFG++ E+NVCDNLGDHL+GNVY KF DEE A +A K L GR+Y GRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K V   +M  LER
Sbjct:   51 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAANGDPSQLDQKTVDEDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSHAMMIELER 237          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: H3G5Y3_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3G5Y3_PHYRM)

HSP 1 Score: 294 bits (752), Expect = 1.780e-92
Identity = 128/189 (67.72%), Postives = 157/189 (83.07%), Query Frame = 0
Query:   65 AEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERILRK 253
            AEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQTILV ++YQNPI+ V+A  GDP+ L + HV ++FE     +++EL KFG++ E+N+CDNLGDHL+GNVY KF DEE A +A K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMH+K VPR +   LE++  +
Sbjct:    1 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIAQNGDPASLDQRHVDEEFEDFYEEIFEELCKFGKLEELNICDNLGDHLVGNVYAKFDDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPRAMQRELEKMFNR 189          
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Match: F0W2M2_9STRA (Splicing factor U2AF 35 kDa subunit putative n=2 Tax=Albugo TaxID=65356 RepID=F0W2M2_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.150e-92
Identity = 140/215 (65.12%), Postives = 167/215 (77.67%), Query Frame = 0
Query:   49 RNPRDRNGMSGAAR--------GGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEXXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERILRKRK 255
            R  RDR+ M G  R        GGAEHLARIHGTEED+VNCPF++KIGACRHGDRCSR H+KP FSQTILV ++YQNP+S ++A  GDPS L +  V +DFE     V++EL KFG++ E+N+CDNLGDHL+GNVYVK+ DEE A +A K L GR+YAGRP++CEFSPVTDFREARCRQFDEGTCNRGG CNFMHVK V R +   LER+  + K
Sbjct:   27 RGFRDRDHMPGNNRRGGEPTTGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPSGLDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRSMQRELERLYNRYK 241          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig115.24.9 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5I7_ECTSI2.150e-13796.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L153_9PHAE1.060e-10795.83Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YWK2_9STRA5.370e-10471.72Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3XMX4_HETAK7.180e-10273.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835ZC00_9STRA8.780e-9972.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ZUE9_9STRA8.620e-9466.99Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
A0A024TD10_9STRA4.200e-9369.70Uncharacterized protein n=7 Tax=Aphanomyces TaxID=... [more]
T0S0M7_SAPDV6.670e-9371.66Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
H3G5Y3_PHYRM1.780e-9267.72Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
F0W2M2_9STRA2.150e-9265.12Splicing factor U2AF 35 kDa subunit putative n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009145U2 auxiliary factor small subunitPRINTSPR01848U2AUXFACTORcoord: 166..188
score: 60.47
coord: 81..100
score: 77.27
coord: 228..240
score: 61.19
coord: 193..217
score: 62.36
coord: 100..120
score: 41.34
coord: 138..153
score: 44.89
IPR009145U2 auxiliary factor small subunitPANTHERPTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITcoord: 65..362
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 130..205
e-value: 6.1E-9
score: 45.7
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 108..205
e-value: 0.0036
score: 26.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 146..202
e-value: 2.3E-6
score: 27.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..209
score: 12.13395
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 211..237
e-value: 3.5E-5
score: 33.2
coord: 76..102
e-value: 0.23
score: 20.5
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 78..101
e-value: 3.6E-5
score: 23.5
coord: 213..236
e-value: 1.7E-6
score: 27.8
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 75..103
score: 12.361315
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 211..238
score: 14.201578
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 106..208
e-value: 8.3E-30
score: 105.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 550..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..639
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..274
NoneNo IPR availablePANTHERPTHR12620:SF8U2 SMALL NUCLEAR RNA AUXILIARY FACTOR 1coord: 65..362
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 95..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig115contigA-nodosum_M_contig115:191554..200001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig115.24.9mRNA_A-nodosum_M_contig115.24.9Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig115 190076..206519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig115.24.9 ID=prot_A-nodosum_M_contig115.24.9|Name=mRNA_A-nodosum_M_contig115.24.9|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=667bp
MSYYGGHGHQGGGGYGGGGGYGGGRGGGGGGGGGPRGGMGIYGGGGMERN
PRDRNGMSGAARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQH
HKPPFSQTILVQNLYQNPISAVMAAGGDPSQLPKDHVQDDFEDFFEEVYQ
ELSKFGEISEMNVCDNLGDHLIGNVYVKFTDEEDADSALKGLMGRWYAGR
PIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLERI
LRKRKGGGGGGDDEDVDGSDRRSSRKRSRSRSRDRDSSRRKRSRSRERRS
SRTRRSRSRERKRDRDRDRDRDRDRDRDRDRDRDRDRDRERKGKDKDKDK
DKDKDRDRERDRDRDREDRKERSERRRRHYTETPVAEDDGAEKSTASAVG
AAAAEEDAEKAVDSTDGGKEGNGATNAGDGDGEMETESAGVTVAEGQEEE
GMVESKEKSDEEDMAEYEEKVNGEDSDEQERAEDGDEQERAEDEIKGKDG
EDSVEYESKGNEENNDMAEEDEIISHYEEAKRAGNERIDLEKYEEFLDPE
KYDEILDPDPDGGEEADGAGEGGRPDADAEHANGDGLGLERANGDDEVVN
GEKPEDEPNGSTISEASRDDGDRDREDDGDLEMAVEDERALEDEDGRGAD
GGDAANERVEEDEDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009145U2AF_small
IPR003954RRM_dom_euk
IPR000504RRM_dom
IPR000571Znf_CCCH
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf