prot_A-nodosum_M_contig1145.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1145.4.1
Unique Nameprot_A-nodosum_M_contig1145.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length977
Homology
BLAST of mRNA_A-nodosum_M_contig1145.4.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 781 bits (2017), Expect = 4.250e-267
Identity = 502/869 (57.77%), Postives = 601/869 (69.16%), Query Frame = 0
Query:    1 MTSAGSFVHGTDGR----RKSTDEEDIANFLSSMDEITSHAAAG-SENDGDRNGVGLRGAGSPGGLGLFFGSASSPA--KVT-SGHDRSLLLETEEGVAEAVPEDWVKDLEALQI-VGDKCNSSAEVRTPSGLETQGGHLQHERLKQXXXXXXXXXXXXXXXXXXXXXXXXXXSHEMADGEEVLGLEPEILDEGDGDIYREGISRSPTPVRS---------NSASSRIGPGTRS--GSSGTQAGLGNGERLTRAAKGVSVAEKREQPLDWPGTLDMLGIRDPGNTTPAKNFRATASLPNSELPSMPPPSPRDEKTFPDFVEVRDTRLVSQFPKPKNILVSKVASAQDSNDGGTGEGAGDDAKESKAR-EPRPQVVLLPAPLRTVEVYLRPDVTWEAVSDVYMAVMLSRGLVVRHETAKSVTAEKVSEGSSEWTTVKLTAGVTRDKLRTLVIQFYSETKP--PILSLAGAMARFSGRAGDDLYSAIRDALVERRMPLSFLATDASGVSLDPHYVRDLVGMYAHENMVNLTRYALPLEEYVQGEEERSARLEATLLPQYRAYGLTPPRPTRSKPLSAYPLTTRRLPVSSCGVKEAVEVIERAREHVGLLGGASLDRKEDSGYEADGSPAEG-----------DDGVDGEDSGRATVAEGIRSLIRATWENVKEWCDEEAEARVRRKDSQVRDRLLAVERHREALVTTLRDGVGGAAAYGSPIGREFAARFRPMAGEAVLCYCSAAHAKRVGQLYLTSNHLCFHSSVLGFISQRVLPLLTVASVSHSTVALGMDVIVLTDRGREAHAFGITSVEAGFPGRFHDLIQQCLILCKEEASRRA-EKDGNSAPE-EPDEEQILARVQRLAIAKQRR 833
            M SAGSFVHGT       R+S +E+DIA+F+SS+D+  S  +   S   G R+ VG  G        +F GS S PA  +VT +     LL +  + +A+A P DW+ D E + + V  K +SSA   T +               Q  XXXXXXXXXXXXXXXX        ++E     EVLG EP+ILD  D + Y  G + +   + +         N+ +S +   T +  G +        G  L   +   +  +  E PLDW GTLDM+G+ +    T  K   A A  P SELPS+PPP+ R E  FPDFVE+RD R VSQFPKP N LV+K A A    DG  G+GA +  + + A  + R Q  +LPAPLRTVEVYLRPDVTWE+VSDVYM VMLSRGLVVRH+T K VTAEK ++   +W TVKLT GVTRDKLRTLVIQFY++T+   PILSLAG +ARFSGR GDDLY+AIR+ LVER+MPLSFLATDA  VSLDPHYVRDLVGMYAHEN+VNLTRYALPLEE+V+ EEER ARLEATLLPQYRA GL PPRPTRSKPLSAYPLTTRR PVS+CGV+EA EV+ERAREHV   GG S   ++    + +   A G           D+G   +    ++VAEGIRSLIRATWE+VKEWCDEEAEARVRRKD+QVRDRLLAVE HREAL+  LRDG GG+AA  +P GREFAARFRPMA EAVLC C A HAKRVGQLYLT NH+CFHSSVLGF SQRVLPLLTVA++SH++  LGMD++ L DRG + H+FGIT+VEAGFP RFHDL++QCL+LCK +ASRRA +++G +A E EPDEEQILARVQRLA AKQ R
Sbjct:    1 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDDTASGGSTTTSVLRGGRSSVGKGGD-------IFLGSLSPPALQQVTGTSAAGELLADDGKAIADAFPADWLNDFEGIGLGVQGKTDSSAASATATAQPIHSS-------PQGQXXXXXXXXXXXXXXXXQHRDATIQNNETG---EVLGEEPQILDNVD-EGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDT--KGTSALAVAPVSELPSLPPPAAR-EGGFPDFVEIRDPRNVSQFPKPDNALVAKAA-AGGGGDGQAGQGAXESGEHAAAAGQERGQRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHV-RGGGDSFPPQKGVDVDDENVFASGGXXXXXXXXXXDEGRGAKVGSGSSVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQLR 846          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1145.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIQ7_ECTSI4.250e-26757.77GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 688..751
e-value: 0.0011
score: 28.3
IPR004182GRAM domainPFAMPF02893GRAMcoord: 704..751
e-value: 2.4E-6
score: 27.4
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 686..780
e-value: 1.6E-8
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 850..957
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 860..877
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1145contigA-nodosum_M_contig1145:13728..20808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1145.4.1mRNA_A-nodosum_M_contig1145.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1145 12948..21244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1145.4.1 ID=prot_A-nodosum_M_contig1145.4.1|Name=mRNA_A-nodosum_M_contig1145.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=977bp
MTSAGSFVHGTDGRRKSTDEEDIANFLSSMDEITSHAAAGSENDGDRNGV
GLRGAGSPGGLGLFFGSASSPAKVTSGHDRSLLLETEEGVAEAVPEDWVK
DLEALQIVGDKCNSSAEVRTPSGLETQGGHLQHERLKQQQQHHHQQQQHQ
QQQQHQQQQQQQQSSHEMADGEEVLGLEPEILDEGDGDIYREGISRSPTP
VRSNSASSRIGPGTRSGSSGTQAGLGNGERLTRAAKGVSVAEKREQPLDW
PGTLDMLGIRDPGNTTPAKNFRATASLPNSELPSMPPPSPRDEKTFPDFV
EVRDTRLVSQFPKPKNILVSKVASAQDSNDGGTGEGAGDDAKESKAREPR
PQVVLLPAPLRTVEVYLRPDVTWEAVSDVYMAVMLSRGLVVRHETAKSVT
AEKVSEGSSEWTTVKLTAGVTRDKLRTLVIQFYSETKPPILSLAGAMARF
SGRAGDDLYSAIRDALVERRMPLSFLATDASGVSLDPHYVRDLVGMYAHE
NMVNLTRYALPLEEYVQGEEERSARLEATLLPQYRAYGLTPPRPTRSKPL
SAYPLTTRRLPVSSCGVKEAVEVIERAREHVGLLGGASLDRKEDSGYEAD
GSPAEGDDGVDGEDSGRATVAEGIRSLIRATWENVKEWCDEEAEARVRRK
DSQVRDRLLAVERHREALVTTLRDGVGGAAAYGSPIGREFAARFRPMAGE
AVLCYCSAAHAKRVGQLYLTSNHLCFHSSVLGFISQRVLPLLTVASVSHS
TVALGMDVIVLTDRGREAHAFGITSVEAGFPGRFHDLIQQCLILCKEEAS
RRAEKDGNSAPEEPDEEQILARVQRLAIAKQRRQAREAAAAAAERPAAKA
ALPAVSSPSVTPAPRHPPSPVTARLPSPQVPPSLKEIDNKDNTAEPAGSA
ASGRIVEGGARETPRSEYVAGTKEGTGSERGSSEEETKVAPVASRPRGGG
VGGSFRGGSMMAMGIQAFLEESQKKS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
IPR011993PH-like_dom_sf