prot_A-nodosum_M_contig1145.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1145.12.1
Unique Nameprot_A-nodosum_M_contig1145.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length533
Homology
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BLAST of mRNA_A-nodosum_M_contig1145.12.1 vs. uniprot
Match: A0A6H5JH51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH51_9PHAE)

HSP 1 Score: 560 bits (1443), Expect = 2.680e-191
Identity = 306/511 (59.88%), Postives = 379/511 (74.17%), Query Frame = 0 
Query:    1 MFWGRNKRRGGNLVVCPAHS-MDQLIEAYLVCEVVE------QSIKVGKELLAT-RLGALMAVELGEGSPAEQAAIASIISDYSFHDASVGVVSLLASIYYFSYLARNDVNVLTLLAVAVVAGLNQEATWPWVFKLILGCSRIKDPIVRVAQCRRVHHHQGQLSGQAVLAIGLAVFGVYLEVVPTEDGHTPILFRILLNGFQSLMVVVLIINMVQALEPMETSNLLPRDRLRKWAKVFLDDGLYDKVWYLTLIVGLVWAG-VIAAVVTQLSYEDENLEWDVFTTCLVVMALSLCAVNPGMALLSLWGLIWLVPVGLSLVFRSTFDLMTILINRVNVSVRRMMREARCHLRESLKGAFSVRDTLILLLQVLPITPLMLVFIPIPLLCLLAWLLHLCLRCFLRVADLLVLPISNFQIYGLLSDYGAVSWKMSRLTMDVEPSSMRTLLKRKVGMLRKD--GRLGERVETGVLPCTPYAQLNHTSAPRLGCIAVEVDCRNGNRLRTGKEDLDKML 500
            +FWGRN RRGGNL+VCP  S MD+LI+AYLVCEVV+      +S+   +E + T R G LM VELGE S AEQ A+ ++ISDYSFHDAS+G++SL+ASIYYF  LARN VNVLTLLAVAVVAGLNQEATWPWVFK IL C+R+KDPIVRV+QCR V HHQGQLSGQ  LAIGLA FGVYLEV PT DG TP+LFRILLNGFQ+ MV VL++NMVQA+EPM+ S + P+DRLR WA+ +LDD ++D  WYLTL+VG++W+G V   +   +S+E E L + +   CL+V+ LS+ AVNPGMALL  WG IWLVPVGL+ V RS FD   +LIN+V+++ RRM  E   H R+S +G FSVRD L  LLQVLP+TPL LV +PIPLL    W +HL +R  LRVAD L  P  +F+++ +LSDYG+V+WKM RL+MDVE  SMRTLL  ++  L +     LGER  +GV+P  PY  L+ TSA RLGCIAV++         TG+E+  K L
Sbjct:  160 LFWGRNMRRGGNLIVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMSRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGGVTVTIFVGVSHEFEGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTALMLINKVSLTWRRMANEVVSHARDSARGEFSVRDILKFLLQVLPLTPLFLVSLPIPLLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPSRPYWHLSKTSANRLGCIAVKIG--------TGEEENSKTL 662
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1145.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH51_9PHAE2.680e-19159.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 489..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1145contigA-nodosum_M_contig1145:59562..62262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1145.12.1mRNA_A-nodosum_M_contig1145.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1145 59296..62344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1145.12.1 ID=prot_A-nodosum_M_contig1145.12.1|Name=mRNA_A-nodosum_M_contig1145.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=533bp
MFWGRNKRRGGNLVVCPAHSMDQLIEAYLVCEVVEQSIKVGKELLATRLG
ALMAVELGEGSPAEQAAIASIISDYSFHDASVGVVSLLASIYYFSYLARN
DVNVLTLLAVAVVAGLNQEATWPWVFKLILGCSRIKDPIVRVAQCRRVHH
HQGQLSGQAVLAIGLAVFGVYLEVVPTEDGHTPILFRILLNGFQSLMVVV
LIINMVQALEPMETSNLLPRDRLRKWAKVFLDDGLYDKVWYLTLIVGLVW
AGVIAAVVTQLSYEDENLEWDVFTTCLVVMALSLCAVNPGMALLSLWGLI
WLVPVGLSLVFRSTFDLMTILINRVNVSVRRMMREARCHLRESLKGAFSV
RDTLILLLQVLPITPLMLVFIPIPLLCLLAWLLHLCLRCFLRVADLLVLP
ISNFQIYGLLSDYGAVSWKMSRLTMDVEPSSMRTLLKRKVGMLRKDGRLG
ERVETGVLPCTPYAQLNHTSAPRLGCIAVEVDCRNGNRLRTGKEDLDKML
KERAEVEEDAEVVAEPDRDASQRVAPSTDSKV*
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