prot_A-nodosum_M_contig114.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig114.16.1
Unique Nameprot_A-nodosum_M_contig114.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length404
Homology
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BLAST of mRNA_A-nodosum_M_contig114.16.1 vs. uniprot
Match: D8LQU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU6_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.100e-16
Identity = 49/120 (40.83%), Postives = 63/120 (52.50%), Query Frame = 0 
Query:   13 ADVLVLCPTQDFLFLGSVGKAWKTAWVAVGRAKNTSIGLAAATQARTEWALDDSSFWGVARRRGGVFCLTARAGNLGGLQAAAKVCGGEWNRQDGARQVIELAAESGHLNMIRWAREQGC 132
            A V  + P +D    G     W++ W A GR K TS+ LA AT AR E  +   SF       GGVFCL A AGNLGG+Q AA+  G  W        +   AA +GHL+++ WA+  GC
Sbjct:   58 AVVFRIPPVKD----GRRASNWRSTWEAEGRPKKTSVSLATATNARVETIMGQPSFHAATGHLGGVFCLAASAGNLGGIQTAARESGDGWKSLGPVVMMTAEAASAGHLHILEWAKSSGC 173
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BLAST of mRNA_A-nodosum_M_contig114.16.1 vs. uniprot
Match: A0A6H5JT58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT58_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 9.620e-8
Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = 0 
Query:   67 SFWGVARRRGGVFCLTARAGNLGGLQAAAKVCGGEWNRQDGARQVIELAAESGHLNMIRWAREQGC 132
            SF    R  GGVFCL A AGNLGG+Q AA+  G  W        +   AA +GHL+++ WA+  GC
Sbjct:    5 SFHVATRHLGGVFCLAASAGNLGGIQTAARESGDGWESLGSVVMMTAEAASAGHLHILEWAKSAGC 70
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig114.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQU6_ECTSI1.100e-1640.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT58_9PHAE9.620e-845.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 80..403
e-value: 1.2E-26
score: 95.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 113..399
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 246..402
coord: 72..251
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 246..402
coord: 72..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig114contigA-nodosum_M_contig114:350039..351250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig114.16.1mRNA_A-nodosum_M_contig114.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig114 349670..355523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig114.16.1 ID=prot_A-nodosum_M_contig114.16.1|Name=mRNA_A-nodosum_M_contig114.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=404bp
MFNPLAARIDVIADVLVLCPTQDFLFLGSVGKAWKTAWVAVGRAKNTSIG
LAAATQARTEWALDDSSFWGVARRRGGVFCLTARAGNLGGLQAAAKVCGG
EWNRQDGARQVIELAAESGHLNMIRWAREQGCPWGEQTCASAALGGHPEI
LRWLKEQGCPWDKLTCQFLAKDGHLEVLKWAREMCCPWDESTCHAAAEGG
HLELLKWARSQDCKWDAETCSRAALGGHLDVLQWLVRQNCPMGNHACSRA
AAEGGHLGVLNWLKSKGRWSAWDACSSAASGGHLEVIKWARQQGCDWDEA
TCYSAAGGGHLEVLKWVRSEGCPWNESTCDYAARGGHLEVLQWARMQGCP
WDEVTSVYATEVGHLRMLKWAVEQGCPWNRETCLLAAEKTGDGELVSWIK
QQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf