prot_A-nodosum_M_contig11352.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11352.1.1
Unique Nameprot_A-nodosum_M_contig11352.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length124
Homology
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A4U8UIT5_STECR (Histone domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8UIT5_STECR)

HSP 1 Score: 141 bits (355), Expect = 7.460e-41
Identity = 86/130 (66.15%), Postives = 97/130 (74.62%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGH-KGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFR-----ERSALPRLCRSGPSGSRRGPRGLVRTHEPVRHPCEARHHYAQGH 124
            MARTKQTARKSTGGKAP + +   +GCPQV +RHR  +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF+     + S + R C   P   R  PR  +R H+ VRH  +A  HYAQGH
Sbjct:    1 MARTKQTARKSTGGKAPRKQSNWLEGCPQVGARHR--KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSVVRRAC--PPGICRSLPRRPLRGHQLVRHSRQASDHYAQGH 126          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A3R7NWW4_PENVA (Histone domain-containing protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7NWW4_PENVA)

HSP 1 Score: 141 bits (356), Expect = 1.060e-40
Identity = 83/124 (66.94%), Postives = 92/124 (74.19%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFRERSALPRLCRSGPSGSRRG-PRGLVRTHEPVRHPCEARHHYAQG 123
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF+    LP LC  G +GS RG P   +R H+PVRHP +A +HYAQG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT-DPLPVLCCHGSAGSLRGLPGRPLRGHQPVRHPRQACNHYAQG 123          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A1Z5LBX3_ORNMO (Histone H3 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LBX3_ORNMO)

HSP 1 Score: 141 bits (355), Expect = 8.330e-40
Identity = 84/139 (60.43%), Postives = 95/139 (68.35%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFR---------------ERSALPRLCRSGPSGSRRG-PRGLVRTHEPVRHPCEARHHYAQG 123
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF+                 S+LP L R G +G +R  PR  VR H+PVRHP +ARHH+A+G
Sbjct:    1 MARTKQTARKSTGGKAPRKHLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMAARHRGSSLPELRRDGSAGGQRSLPRRPVRRHQPVRHPRQARHHHAKG 139          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A3Q2CVD4_CYPVA (Histone H3.3 n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2CVD4_CYPVA)

HSP 1 Score: 135 bits (339), Expect = 5.240e-38
Identity = 87/153 (56.86%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF----------------------RERSAL-------PRLCRSGPSGSRRGPRGLVRTHEPVRHPCEARHHYAQGH 124
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF                      R  SAL       P LC +G  G R  P G VR H+PVRHP +ARHH+AQ H
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQVNKPLDHRRPSALTQTPDPNPLLCSAG--GQRGLPGGAVRGHQPVRHPRQARHHHAQRH 151          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: B8A6X4_ORYSI (Histone domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8A6X4_ORYSI)

HSP 1 Score: 134 bits (337), Expect = 8.830e-38
Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFRERSALPRLCRSGPSGSRRGPRGLVRTHEPVRHPCEARHHYAQGH 124
            MARTKQTARKSTGGKAP +    K   +        +KPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDF+          +    + R PR  +R H+P+RHP +ARHH+AQGH
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAPRLPRRALRGHQPLRHPRQARHHHAQGH 124          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A3P8UEV8_AMPPE (Histone domain-containing protein n=1 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8UEV8_AMPPE)

HSP 1 Score: 133 bits (334), Expect = 1.230e-36
Identity = 78/127 (61.42%), Postives = 90/127 (70.87%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQ--VCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFRERSALPRLCRSGPSGSRRG-PRGLVRTHEPVRHPCEARHHYAQGH 124
            MARTKQTARKSTGGKAP +    +   +    +     +KPHRYRPGT ALRE+RRYQKSTELLIRK PFQRLVREIAQDF++R ALP L R G  G +RG P   +R H  VRHP +  HH+AQ H
Sbjct:    1 MARTKQTARKSTGGKAPRKQLAAEAARKSATATATGGVKKPHRYRPGTEALREVRRYQKSTELLIRKPPFQRLVREIAQDFQDRPALPELRRHGSVGGQRGLPGRTLRGHRSVRHPRQEGHHHAQRH 127          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: W5NRH6_SHEEP (Histone domain-containing protein n=1 Tax=Ovis aries TaxID=9940 RepID=W5NRH6_SHEEP)

HSP 1 Score: 130 bits (328), Expect = 5.420e-36
Identity = 78/125 (62.40%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFRERSALPRLCRSGPSGSRRG-PRGLVRTHEPVRHPCEARHHYAQGH 124
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL     +      ALP+L   G +GS RG P G +R H+PVRHP +ARHH+AQGH
Sbjct:   41 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL----GEGDGVGPALPKLGCDGAAGSVRGLPGGALRGHQPVRHPRQARHHHAQGH 161          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A4U5LP26_STECR (Histone domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LP26_STECR)

HSP 1 Score: 129 bits (324), Expect = 7.140e-36
Identity = 80/126 (63.49%), Postives = 89/126 (70.63%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFR-ERSALPRLCRSGPSGSRRG-PRGLVRTHEPVRHPCEARHHYAQGH 124
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF+ +      LC   PS S R  PR  +R H+ VRHP +A HH+AQ H
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSLC--SPSRSPRSLPRRPLRGHQLVRHPRQASHHHAQRH 124          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: A0A8D1S2G1_PIG (Histone domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1S2G1_PIG)

HSP 1 Score: 128 bits (322), Expect = 1.480e-35
Identity = 75/123 (60.98%), Postives = 84/123 (68.29%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFRERSALPRLCRSGPSGSRRGPRGLVRTHEPVRHPCEARHHYAQG 123
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF+              G R  P G +R H+PV HP +A H++AQG
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALRGVRGLPGGALRGHQPVCHPRQACHYHAQG 123          
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Match: G1NH17_MELGA (Histone H3 n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=G1NH17_MELGA)

HSP 1 Score: 123 bits (309), Expect = 7.260e-34
Identity = 75/124 (60.48%), Postives = 86/124 (69.35%), Query Frame = 0
Query:    1 MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFR-----ERSALPRLCRSGPSGSRRGPRGLVRTHEPVRHPCEARHH 119
            MARTKQTARKSTGGKAP +    K   +        +KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF+     + SA+  L  +  +       G +R H+PVRHP +ARHH
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLV----GALRGHQPVRHPRQARHH 120          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11352.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4U8UIT5_STECR7.460e-4166.15Histone domain-containing protein n=1 Tax=Steinern... [more]
A0A3R7NWW4_PENVA1.060e-4066.94Histone domain-containing protein n=1 Tax=Penaeus ... [more]
A0A1Z5LBX3_ORNMO8.330e-4060.43Histone H3 (Fragment) n=1 Tax=Ornithodoros moubata... [more]
A0A3Q2CVD4_CYPVA5.240e-3856.86Histone H3.3 n=1 Tax=Cyprinodon variegatus TaxID=2... [more]
B8A6X4_ORYSI8.830e-3860.48Histone domain-containing protein n=1 Tax=Oryza sa... [more]
A0A3P8UEV8_AMPPE1.230e-3661.42Histone domain-containing protein n=1 Tax=Amphipri... [more]
W5NRH6_SHEEP5.420e-3662.40Histone domain-containing protein n=1 Tax=Ovis ari... [more]
A0A4U5LP26_STECR7.140e-3663.49Histone domain-containing protein n=1 Tax=Steinern... [more]
A0A8D1S2G1_PIG1.480e-3560.98Histone domain-containing protein n=1 Tax=Sus scro... [more]
G1NH17_MELGA7.260e-3460.48Histone H3 n=1 Tax=Meleagris gallopavo TaxID=9103 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 34..55
score: 76.78
coord: 58..75
score: 97.46
coord: 3..17
score: 97.1
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..118
e-value: 4.3E-5
score: 31.2
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..80
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..94
e-value: 2.0E-29
score: 104.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..81
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..80
e-value: 3.5E-19
score: 69.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..119
NoneNo IPR availablePANTHERPTHR11426:SF207HISTONE H3coord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11352contigA-nodosum_M_contig11352:8981..9352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11352.1.1mRNA_A-nodosum_M_contig11352.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11352 8978..9352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11352.1.1 ID=prot_A-nodosum_M_contig11352.1.1|Name=mRNA_A-nodosum_M_contig11352.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp
MARTKQTARKSTGGKAPTQAAGHKGCPQVCSRHRWCEKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFRERSALPRLCRSGPSGSRRGP
RGLVRTHEPVRHPCEARHHYAQGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3