prot_A-nodosum_M_contig1133.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1133.23.1
Unique Nameprot_A-nodosum_M_contig1133.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length76
Homology
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A2R4QQ80_9PHAE (NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ80_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.720e-44
Identity = 69/75 (92.00%), Postives = 69/75 (92.00%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQDFKNIT 75
            LFGVFFSGHPDLRRLLT YGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEP ELTQEFR FDFHIP SQD K IT
Sbjct:  117 LFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRTFDFHIPWSQDLKKIT 191          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A0U1XC91_SCYLO (NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A0U1XC91_SCYLO)

HSP 1 Score: 138 bits (347), Expect = 9.400e-40
Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQD 70
            LFGVFFS HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEP EL+QEFR+FDFHIP SQ+
Sbjct:  117 LFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELSQEFRSFDFHIPWSQN 186          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A0U1Z5T2_9PHAE (NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1Z5T2_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.180e-39
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLS 68
            L GVFFSGHPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEP ELTQEFR+FDFHIP S
Sbjct:  117 LLGVFFSGHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRSFDFHIPWS 184          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A8F0FDI1_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FDI1_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 3.080e-38
Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQD 70
            LFGVFFS HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQRVVVCE  ELTQEFR+FDFH P SQ+
Sbjct:  117 LFGVFFSDHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELTQEFRSFDFHTPWSQN 186          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A1I9LW92_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW92_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 8.780e-38
Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQDF 71
            LFGVFFS HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQRVVVCE  EL+QEFR+F+FHIP  Q F
Sbjct:  117 LFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCESIELSQEFRSFNFHIPWQQKF 187          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A0U2KE80_9PHAE (NADH dehydrogenase subunit 9 n=58 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U2KE80_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 5.030e-37
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQ 69
            LFGVFFS HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQ+VVVCE  EL+QEFR+F+FH+P SQ
Sbjct:  117 LFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFNFHVPWSQ 185          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A516ICK1_9PHAE (NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae TaxID=35120 RepID=A0A516ICK1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 5.030e-37
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQD 70
            LFGVFF  HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQ+VVVCE  EL+QEFR+FDFH+P SQ+
Sbjct:  117 LFGVFFYNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFDFHVPWSQN 186          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: Q94YZ7_PYLLI (NADH dehydrogenase subunit 9 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ7_PYLLI)

HSP 1 Score: 130 bits (327), Expect = 1.010e-36
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQD 70
            LFGVFFS HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQ+VVVCE  EL+QEFR FDFH+P S +
Sbjct:  117 LFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCESIELSQEFRTFDFHMPWSHN 186          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A8F0K105_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K105_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.100e-35
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQ 69
            LFGVFFS HPDLRR+LT YGFEGHPLRKDFPLSGYFELRYDEDQRVVVCE  EL+QEFR+F FH P  Q
Sbjct:  117 LFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFTFHTPWLQ 185          
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Match: A0A4Y5T7L5_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7L5_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.790e-34
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    1 LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPFELTQEFRAFDFHIPLSQD 70
            LFGVFF  HPDLRR+LT YGFEGHPLRKDFPLSG+FELRYDEDQRVVVCE  ELTQEFRAF+F  P S +
Sbjct:  121 LFGVFFYTHPDLRRILTDYGFEGHPLRKDFPLSGFFELRYDEDQRVVVCESIELTQEFRAFNFSTPWSNN 190          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1133.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ80_9PHAE2.720e-4492.00NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3... [more]
A0A0U1XC91_SCYLO9.400e-4088.57NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonac... [more]
A0A0U1Z5T2_9PHAE2.180e-3991.18NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae... [more]
A0A8F0FDI1_9PHAE3.080e-3887.14NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiati... [more]
A0A1I9LW92_9PHAE8.780e-3884.51NADH dehydrogenase subunit 9 n=1 Tax=Pleurocladia ... [more]
A0A0U2KE80_9PHAE5.030e-3784.06NADH dehydrogenase subunit 9 n=58 Tax=Phaeophyceae... [more]
A0A516ICK1_9PHAE5.030e-3782.86NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae ... [more]
Q94YZ7_PYLLI1.010e-3682.86NADH dehydrogenase subunit 9 n=1 Tax=Pylaiella lit... [more]
A0A8F0K105_9PHAE1.100e-3584.06NADH dehydrogenase subunit 9 n=1 Tax=Analipus japo... [more]
A0A4Y5T7L5_9PHAE3.790e-3481.43NADH dehydrogenase subunit 9 n=1 Tax=Dictyopteris ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitPFAMPF00329Complex1_30kDacoord: 1..35
e-value: 3.5E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR10884:SF14NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 3, MITOCHONDRIALcoord: 1..69
NoneNo IPR availablePANTHERPTHR10884NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3coord: 1..69
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilySUPERFAMILY143243Nqo5-likecoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1133contigA-nodosum_M_contig1133:250178..250405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1133.23.1mRNA_A-nodosum_M_contig1133.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1133 250178..250405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1133.23.1 ID=prot_A-nodosum_M_contig1133.23.1|Name=mRNA_A-nodosum_M_contig1133.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=76bp
LFGVFFSGHPDLRRLLTGYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCE
PFELTQEFRAFDFHIPLSQDFKNIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001268NADH_UbQ_OxRdtase_30kDa_su
IPR037232NADH_quin_OxRdtase_su_C/D-like