prot_A-nodosum_M_contig1130.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1130.12.1
Unique Nameprot_A-nodosum_M_contig1130.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1159
Homology
BLAST of mRNA_A-nodosum_M_contig1130.12.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 957 bits (2475), Expect = 0.000e+0
Identity = 670/1210 (55.37%), Postives = 737/1210 (60.91%), Query Frame = 0
Query:    5 PXXXXQVLFFDEFTHHLGPGQQFKDGGEVDEVKFREAVIVRIIHVVPKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTANVIRGAVYTLPHEIITNHLVIRGYFQAMSVVICGTVVPRSALSPSAVQALITSTSKPTLAVPSPXXXXXXXXXXXXXXRPSHPSPRPINQQARKPATPXXXXXXXXSPTVPXXXXXRKVASQAPTAGAAAKKDGR------------------------ASGNAGAKPSKTSPPSXXXALTXXAVSASIAQSAAPKTWAPLGLPHIEMTTMAASTVMGNRGSAGAGTVRGISPGDLAPYGEADLAVALTCAPKRLQRIAAEANPFDDRFLVPEGAARRVREAVSRLVSLAGQRGVAGRQAECNALEATAESVEACFR-QVPPANGDKDKQ---------TTENNPTSGTPAVTAGVVFVPSQEAFDEEVSERLATAVIRSLRFFRVAAAGTEAACMPG------HSGGEHVPTVAVSPDGTVTVDDGPRRLALAGLRLAGAVATAPGPARALLAAGGFHVLWRLSSDPAATPTGVALALGALCQGVRHADVLRVFLTRWDDAEVLDPSAEDEAQEEKGLDRLGGYEACALVLSGPVAHPSALSRVRSIMQFVGIVECLKHVRSLAAKAGAVAVAXXXXXVVDVEAAPSSSSVTTGDKARGGGVSVAGPSAVKVMEELAHALGALEALLAEGAGDTSASGIQPGLGKGDRKRRLQGFEVLQAKVDAKSEGSDSAAAPASDGHGTAASSGNTTVNRKKGDGVTESDGPSVAAGISAHRGREVVRDRRPRGGLAPSLVGLLWEHQLPAALAAGVALAARASEREAAAAVISMARTSADDTEAGIGGRECSRGEGSGEGPGSTAAALVFAAVRQVTLRLLRGAGDPLSGALVFAGQPRSTAALACALDPTSLATPVGPEGTATMESLADGLDETLVTPGGLARLLVRSCQASAAADLALNAINVQKDKTGASANEAATVGGILS--------------------AAGGAAFLSGGAEGDMTAALRKLHELGPSPAGRSFACEVMCRHALSAVLHPSPGGGRAAVTVTTSLLLWLLEGDQESSSEVLAERWGALRSRVAALASEVGWADSLSHRLYLMHKAMAMVAYDSGKKSNKISSGSSGSGSGFGGDELPRAGAMMAGLARQSQQLAVYIGLEDPPDA 1154
            P    QVLFF EF          K+ GE+DEVKFREAV+ RIIHVVP GE P QV+LPPTFRGITQ EPFQLEVFCKNLNNL S  FD LMPTA V  GAVYT+P +I+TNHLVIRG FQAMSVVICGTVVPR+ALSP A+QAL  S  KP L  PSPXXXXXXXXXXXXXX                    XXXXXXXX     XXXXX                                           A+  +G  PSK S                   S+ PK WAPL LP    T  A    +G  G+ G     G+SP DLAPYGEA+L+ ALT  P+RLQR AAEANPFDDRFLVP  AAR V+EAV+RLVSLA + G AGR  EC AL+A A+ VEACFR Q P   G++  Q           E   T  T   TA VV  PS EAF+++VS  LATAVIRSLRFFR AAAGTEA  +P         GG H P VAV  DG+VTVDDG RR+ALAGLRLAGAVATAP PA ALLAAGGFHVLWRL  DPAATP GVALALGALCQG+RHADVLRVFLTRW++  V D +   EA+   GL RLGGYEACA VLS  VAHP+ALSR RSIMQ+V +VECL+ VR LA KAG    A         EA                     GP+AVK ME+LAHALGALEAL++EGAG+TSASGIQPG+ KGDRKRRLQGFEVL AK                                                           RD+RPRGGLAPSLV LLWEHQLPAALAAGVA                                                 ALVFA VRQV LRLLRGAGDPLSGALVFAGQPRSTAALA  LDP++LATPVGPE + T+E+LADGLD+TLVTPGGLARLLVRSCQA +AADLAL+      DK+  +      + G                       A      LSGGAE DMTAALRKLHELGPS AGRS  CEV CR AL AVL+P PGGGRA+VTVTTSLLLWLLEGDQES S+VLAERWG+LRSRV ALA EVGW+DSLSHRLYL H AM MVA D+ K +          G G G  +LPRAG MMAGLARQS  LAVY+GLED PDA
Sbjct:    2 PPSPPQVLFFGEFRP--------KETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSKYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVS-DKPPLGGPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASPSGPGPSKDS-------------------SSLPKAWAPLALPAAAATAAA----VGQGGTTG----DGVSPADLAPYGEAELSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLADESGPAGRNLECEALDAAADCVEACFRRQTPAKKGEEGGQQGGLVPSPVAVEQGSTVATTGTTATVV--PSSEAFNDDVSGPLATAVIRSLRFFRAAAAGTEAGSIPAGEGEEERGGGRHTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPAGALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEG-VDDGAGGAEAE---GLSRLGGYEACASVLSRQVAHPAALSRGRSIMQYVALVECLQLVRKLATKAGTTVAAAKA-----AEATGKDGXXXXXXXXXXXXXXXXGPAAVKGMEDLAHALGALEALMSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKA---------------------------------------------------------ARDKRPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGAGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPESSPTIEALADGLDQTLVTPGGLARLLVRSCQALSAADLALSTA----DKSPQAGRGGMVIDGXXXXXXXXXXKTGXXXXXXXXXXAGATTGILSGGAEADMTAALRKLHELGPSLAGRSSVCEVACRFALPAVLNPPPGGGRASVTVTTSLLLWLLEGDQESCSDVLAERWGSLRSRVDALADEVGWSDSLSHRLYLFHTAMGMVAMDAKKPAAAXXXXXXSKGGGSG--DLPRAGEMMAGLARQSHTLAVYLGLEDVPDA 1098          
BLAST of mRNA_A-nodosum_M_contig1130.12.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 909 bits (2348), Expect = 4.530e-297
Identity = 645/1176 (54.85%), Postives = 718/1176 (61.05%), Query Frame = 0
Query:   31 GEVDEVKFREAVIVRIIHVVPKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTANVIRGAVYTLPHEIITNHLVIRGYFQAMSVVICGTVVPRSALSPSAVQALITSTSKPTLAVPSPXXXXXXXXXXXXXXRPSHPSPRPINQQARKPATPXXXXXXXXSPTVPXXXXXRKVASQAPTAGAAAKKDGRASGNA---------GAKPSKTSPPSXXXALTXXAVSASIAQSAAPKTWAPLGLPHIEMTTMAASTVMGNRGSAGAGTVRGISPGDLAPYGEADLAVALTCAPKRLQRIAAEANPFDDRFLVPEGAARRVREAVSRLVSLAGQRGVAGRQAECNALEATAESVEACFRQVPPANGDKD--KQ--------TTENNPTSGTPAVTAGVVFVPSQEAFDEEVSERLATAVIRSLRFFRVAAAGTEAACMPG------HSGGEHVPTVAVSPDGTVTVDDGPRRLALAGLRLAGAVATAPGPARALLAAGGFHVLWRLSSDPAATPTGVALALGALCQGVRHADVLRVFLTRWDDAEVLDPSAEDEAQEEKGLDRLGGYEACALVLSGPVAHPSALSRVRSIMQFV------GIVECLKHVRSLAAKAGAVAVAXXXXXVVDVEAAPSSSSVTTGDKARGGGVSVAGPSAVKVMEELAHALGALEALLAEGAGDTSASGIQPGLGKGDRKRRLQGFEVLQAKVDAKSEGSDSAAAPASDGHGTAASSGNTTVNRKKGDGVTESDGPSVAAGISAHRGREVVRDRRPRGGLAPSLVGLLWEHQLPAALAAGVALAARASEREAAAAVISMARTSADDTEAGIGGRECSRGEGSGEGPGSTAAALVFAAVRQVTLRLLRGAGDPLSGALVFAGQPRSTAALACALDPTSLATPVGPEGTATMESLADGLDETLVTPGGLARLLVRSCQASAAADLALNAINVQKDKTGASANEAATVGG--------------ILSAAGGAAFLSGGAEGDMTAALRKLHELGPSPAGR-------SFACEVMCRHALSAVLHPSPGGGRAAVTVTTSLLLWLLEGDQESSSEVLAERWGALRSRVAALASEVGWADSLSHRLYLMHKAMAMVAYDSGKKSNKISSGSSGSGSGFGGDELPRAGAMMAGLARQSQQLAVYIGLEDPPDA 1154
            G    VKFREAV+ RIIHVVP GE P QV+LPPTFRGITQ EPFQLEVFCKNLNNL S  FD LMPTA V  GAVYT+P +I+TNHLVIRG FQAMSVVICGTVVPR+ALSP A+QAL  S  KP+L  PSP       XXXXXXX                    XXXXXXXX     XXXXX                                 GA PS   P              S   S+ PK WAPL LP    T    + V+G  G+ G     G+SP DLAPYGEADL+ ALT  P+RLQR AAEANPFDDRFLVP  AAR V+EAV+RLVSL  + G AGR  EC AL+A A+ +EACFR+   A   ++  KQ          E   T  T   TA VV  PS EAF+++VS  LATAVIRSLRFFR AAAGTEA  +P         GG H P VAV  DG+VTVDDG RR+ALAGLRLAGAVATAP PARALLAAGGFHVLWRL  DPAATP GVALALGALCQG+RHADVLRVFLTRW++  V D +   EA+   GL RLGGYEACA VLS  VAHP+ALSR RSIM         G     +  R    + G                                  + AGP+AVK ME+LAHALGALEAL++EGAG+TSASGIQPG+ KGDRKRRLQGFEVL AK DAK+  + S AAP S+ +                    +SD P+VAA ISAH GRE  RD++PRGGLAPSLV LLWEHQLPAALAAGVA                                                 ALVFA VRQV LRLLRG+GDPLSGALVFAGQPRSTAALA  LDP++LATPVGPEG+ T+E+LADGLD+ L                 +AADLAL+      DK+  +    A + G                 A      LSGGAE DMTAALRKLHELGPS AGR       S  CEV+CR AL AVL P PGGGRA+VTVTTSLLLWLLEGDQES S+VLAERWG LRSRV ALA EVGW+DSLSHRLYL H AM MVA D+ KK    + GS  S  G  GD LPRAG MMAGLARQS  LAVY+GLED P+A
Sbjct:   16 GTPTAVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPGAIQALTVS-DKPSLGGPSPLPSALVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASPSGPGP--------------SKDSSSLPKAWAPLALPAAAAT----AEVVGQGGTTG----DGVSPADLAPYGEADLSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLVDESGPAGRNLECEALDAAADRMEACFRRQTAAKKGEEGGKQGGLGPSPVAVEQGSTLATAGTTAAVV--PSSEAFNDDVSGPLATAVIRSLRFFRTAAAGTEAGSIPAGEGEEERGGGRHTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPARALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEG-VDDGAGGAEAE---GLSRLGGYEACASVLSRQVAHPAALSRGRSIMHRGEGGGGDGQGRECRWGRGGCRRGGG--------GXXXXXXXXXXXXXXXXXXXXAAAAAAAGPAAVKGMEDLAHALGALEALVSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKADAKTGDASSTAAPDSNSN-------------------NKSDDPNVAAAISAHLGREAARDKQPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGSGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPEGSPTIEALADGLDQAL-----------------SAADLALSTA----DKSPEAGRGGAVIDGGXXXXXXXXXXXXXXXVAGATTGILSGGAEADMTAALRKLHELGPSLAGRCDVVVKRSSVCEVICRFALPAVLKPLPGGGRASVTVTTSLLLWLLEGDQESCSDVLAERWGLLRSRVDALADEVGWSDSLSHRLYLFHTAMGMVALDA-KKPAAAAGGSKRSKGGGSGD-LPRAGEMMAGLARQSHTLAVYLGLEDVPEA 1109          
BLAST of mRNA_A-nodosum_M_contig1130.12.1 vs. uniprot
Match: A0A7S4DEG1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEG1_HETAK)

HSP 1 Score: 93.6 bits (231), Expect = 1.860e-17
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0
Query:   11 VLFFDEFTHHLGPGQQFKDGG-EVDEVKFREAVIVRIIHVVPKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTANVIRGAVYTLPHEIITNHLVIRGYFQAMSVVICGTVVPRSALSPSAVQAL 148
            +LF  +F H        KD   ++DE+ FREAV+V+   +VP G  P   +L P F+ +TQ+E F LEVF K+L++     FD L P      G  +    E ITNHL++RG + A+S+ + G V+PR  LSP  +  L
Sbjct:    7 ILFVGDFQH--------KDLEIDIDEITFREAVVVKGFQIVPAGTNPHPETL-PNFKSVTQSEKFNLEVFAKDLSSPGKTSFDRLTPRFEGQGGVTFNTQDEQITNHLILRGSYTALSICLYGNVIPRPQLSPEVLATL 136          
BLAST of mRNA_A-nodosum_M_contig1130.12.1 vs. uniprot
Match: A0A1Y1IHP4_KLENI (VIR_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHP4_KLENI)

HSP 1 Score: 64.3 bits (155), Expect = 1.750e-6
Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 0
Query:   10 QVLFFDEFTHHLGPGQQFKDGGEVDEVKFREAVIVRIIHVVPKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTAN-VIRGAVYTL-PHEIITNHLVIRGYFQAMSVVICGTVVPRSA 139
            +VL+ D F H             VDEV F++ VIV   H+VPK   P    L   F  +T   PF L+VF  N  +  ++ F  L P  + V  G   ++ P  ++T HLV RG +Q +S++I G  +P  A
Sbjct:    2 EVLYCDSFLHEAA-------ADHVDEVLFKKPVIVSACHIVPKDGNPEPELL--EFFSLTSPPPFNLQVFYHN-GDQNASHFQKLGPQISWVADGGKESIDPQPVVTRHLVFRGNYQNLSLIIYGATIPDEA 123          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1130.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBI8_ECTSI0.000e+055.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ9_9PHAE4.530e-29754.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DEG1_HETAK1.860e-1738.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Y1IHP4_KLENI1.750e-634.09VIR_N domain-containing protein n=1 Tax=Klebsormid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 740..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..782
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..217
IPR026736Protein virilizerPANTHERPTHR23185UNCHARACTERIZEDcoord: 9..646

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1130contigA-nodosum_M_contig1130:201275..210565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1130.12.1mRNA_A-nodosum_M_contig1130.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1130 201272..222140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1130.12.1 ID=prot_A-nodosum_M_contig1130.12.1|Name=mRNA_A-nodosum_M_contig1130.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1159bp
MNLPPPPPPQVLFFDEFTHHLGPGQQFKDGGEVDEVKFREAVIVRIIHVV
PKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTANV
IRGAVYTLPHEIITNHLVIRGYFQAMSVVICGTVVPRSALSPSAVQALIT
STSKPTLAVPSPPPSTMAAPPPPPPPRPSHPSPRPINQQARKPATPPAPP
PKAPSPTVPPPPPARKVASQAPTAGAAAKKDGRASGNAGAKPSKTSPPSP
SPALTSPAVSASIAQSAAPKTWAPLGLPHIEMTTMAASTVMGNRGSAGAG
TVRGISPGDLAPYGEADLAVALTCAPKRLQRIAAEANPFDDRFLVPEGAA
RRVREAVSRLVSLAGQRGVAGRQAECNALEATAESVEACFRQVPPANGDK
DKQTTENNPTSGTPAVTAGVVFVPSQEAFDEEVSERLATAVIRSLRFFRV
AAAGTEAACMPGHSGGEHVPTVAVSPDGTVTVDDGPRRLALAGLRLAGAV
ATAPGPARALLAAGGFHVLWRLSSDPAATPTGVALALGALCQGVRHADVL
RVFLTRWDDAEVLDPSAEDEAQEEKGLDRLGGYEACALVLSGPVAHPSAL
SRVRSIMQFVGIVECLKHVRSLAAKAGAVAVAAASAAVVDVEAAPSSSSV
TTGDKARGGGVSVAGPSAVKVMEELAHALGALEALLAEGAGDTSASGIQP
GLGKGDRKRRLQGFEVLQAKVDAKSEGSDSAAAPASDGHGTAASSGNTTV
NRKKGDGVTESDGPSVAAGISAHRGREVVRDRRPRGGLAPSLVGLLWEHQ
LPAALAAGVALAARASEREAAAAVISMARTSADDTEAGIGGRECSRGEGS
GEGPGSTAAALVFAAVRQVTLRLLRGAGDPLSGALVFAGQPRSTAALACA
LDPTSLATPVGPEGTATMESLADGLDETLVTPGGLARLLVRSCQASAAAD
LALNAINVQKDKTGASANEAATVGGILSAAGGAAFLSGGAEGDMTAALRK
LHELGPSPAGRSFACEVMCRHALSAVLHPSPGGGRAAVTVTTSLLLWLLE
GDQESSSEVLAERWGALRSRVAALASEVGWADSLSHRLYLMHKAMAMVAY
DSGKKSNKISSGSSGSGSGFGGDELPRAGAMMAGLARQSQQLAVYIGLED
PPDAGDFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026736Virilizer