prot_A-nodosum_M_contig1130.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1130.10.1
Unique Nameprot_A-nodosum_M_contig1130.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length956
Homology
BLAST of mRNA_A-nodosum_M_contig1130.10.1 vs. uniprot
Match: A0A6H5KGW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW2_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 2.300e-62
Identity = 235/553 (42.50%), Postives = 281/553 (50.81%), Query Frame = 0
Query:  221 RASNWMSVIERLELEYGGGGAFVTDGA-SSGSRSDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVRKHSFDYEDEFIDDTELEKQYYAKEASSKVQTVHSGFFANQGTVATVEPD-GGKESGGGVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAESGAGPKKTPKVPDQQAVLADRLTGSVESSSSAQQRLGEGASMTPSVDGVISTAPGATADAASSAAAVSFSGDANGSXXXXXXPQEGDGASSGNGGITTPKNSDARNKDSSVTDAAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKPPALSWDPDLETAMTKFEEDSKAWVKGDRAAGEEANRVFEDMRALDVFARRTLADVHNSRTYLMRLAAVYGNPPLEMKTMLIELKEREDQEECTRLQQEFDALRSVFVSEVAASVGQLAATGQPLTPPFSWSDNLRGHLHDMLKAFEAWSLKEHGGR-TRQALTDTKSLYDQLAQEWPAELSMTADCLRKMFNNEKRRIKSKANKEAAA 770
            R   W+ +IERLELE+ GG   V   + +S S  D  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RKHSFDYED+FIDDT L + YYAKEASSKV+TVH+GFFANQG VATV+ D GG+ S GG G                                          TS      P                           Q                IS A    A A         SG                G SSG+  +T                                                   T  PA  W P+LE A  +FE+DSKAWV   R AG+ A  V E MR LD   RR+  D H+   YL RL+AVYG P   +KT+L  LK+R+D +E  RL QE+ +LR+ F + V  SV    A G PL PP+ WSD +R  LHDML+A EAW  KEHGGR TR+A+   K+++D+L+Q WPAEL +TAD ++KM+ NEKRR+K+KA +EAAA
Sbjct:   61 RGRGWLDLIERLELEHRGGTPLVASSSEASVSGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKHSFDYEDDFIDDTLLVEAYYAKEASSKVKTVHTGFFANQGAVATVDSDDGGERSSGGAG---------DAGGADSEVIVRPKKKKVQNANTKRAANVCLLETSHPGSGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----------------ISAALPGGAGAVDXXXXXXXSG----------------GGSSGDTPVTP--------------------------------------------------TAVPA-DWSPELEAATVRFEQDSKAWVDSGRPAGDGAQVVLEAMRTLDALVRRSSLDAHSKDPYLGRLSAVYGQPQAAVKTVLATLKDRDDTKEAARLHQEYRSLRANFETNVDQSVELQRANGSPLAPPYVWSDPVRLCLHDMLRACEAWIAKEHGGRLTRKAIEGMKNIFDELSQRWPAELEVTADQIKKMYTNEKRRMKTKAQREAAA 521          
BLAST of mRNA_A-nodosum_M_contig1130.10.1 vs. uniprot
Match: D8LBJ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ9_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.080e-33
Identity = 257/551 (46.64%), Postives = 295/551 (53.54%), Query Frame = 0
Query:  176 GSXXXXXXAVAAAPTDVSGLMGVESGPEPAAELQPKAGPQHQ-------HRERASNWMSVIERLELEYGGGGAFVTDGASSGSRSDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVRKHSFDYEDEFIDDTELEKQYYAKEASSKVQTVHSGFFANQGTVATVEPD-GGKESGGGVG--------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAESGAGPKKTPKVPDQQAVLADRLTGSVESSSSAQQRLGEGASMTPSVDGVISTAPGATADAASSAAAVSFSGDANGSXXXXXXPQEGDGASSGNGGITTPKNSDARNKDSSVTDAAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKPPALSWDPDLETAMTKFEEDSKAWVKGDRAAGEEANRVFEDMRALDVFARRTLADVHNSRTYLMRLAAVYGNPPLEMKTMLIELKEREDQEECTRLQQEFDALRSVFVSEVAASVGQLAATGQPLTPPFSWSDNLR 698
            GS      AVA+A T  +  +G    P  A   +  AGPQ +          R   W+ +IERLELE+ GG   V   + +    D+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RKHSFDYED+FIDDT L + YYAKEASSKV+TVH+GFFANQG VATV+ D GG+ S GG G                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                        AP A A AA +A                        A++G G   T + S A           GAGA  XXXXXXXXXXXX               T  PA  W P+LE A  +FE+DSKAWV   R AG+ A  V E MR LD   RR+  D H+   YL RL+AVYG P   +KT+L  LK+R+D +E  RL QE+ +LR  F + V  SV    A G PL PP+ WSD +R
Sbjct:   12 GSSTNPECAVASAATTTADELGA---PGAATSAEASAGPQQRKARGLSTRESRGRGWLDLIERLELEHRGGTPLVASSSEASVSGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKHSFDYEDDFIDDTLLVEAYYAKEASSKVKTVHTGFFANQGAVATVDSDDGGERSPGGAGDAGXXDSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP-AVATAAXTAVPT---------------------ATTGVGTTATSQVSAAL--------PGGAGAVDXXXXXXXXXXXXSGDTPVTP-------TAVPAADWSPELEAATVRFEQDSKAWVDIGRPAGDGAQVVLEAMRTLDALVRRSSLDAHSKDPYLGRLSAVYGQPQAAVKTVLATLKDRDDTKEAARLHQEYRSLRENFETNVDQSVELQRANGSPLAPPYVWSDPVR 522          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1130.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KGW2_9PHAE2.300e-6242.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBJ9_ECTSI3.080e-3346.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014840Hpc2-related domainPFAMPF08729HUNcoord: 300..350
e-value: 2.6E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 764..955
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..876
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..819
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1130contigA-nodosum_M_contig1130:177716..200790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1130.10.1mRNA_A-nodosum_M_contig1130.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1130 176658..201130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1130.10.1 ID=prot_A-nodosum_M_contig1130.10.1|Name=mRNA_A-nodosum_M_contig1130.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=956bp
MMADVERGLSALGHTPAPTSSSARWYRFDIDCAAHPAGVSVKALMREADG
PRRKAKSATSASATAVAANGTTGGPAAAATASNRTAMHDVAVADADANGR
AAPEGGAEGPALSVPSFAKVGLASAAPLGSRAGVSGLPILTNAAVTKKNA
LEGGGAASEMATAHDADSSDADATTGSNADSTKAVAAAPTDVSGLMGVES
GPEPAAELQPKAGPQHQHRERASNWMSVIERLELEYGGGGAFVTDGASSG
SRSDESDGDDAEDKESGGDGDGNEGLEGEGNGSGSGNGGEGNGGGKKKAK
SKKKPVRKHSFDYEDEFIDDTELEKQYYAKEASSKVQTVHSGFFANQGTV
ATVEPDGGKESGGGVGADGSGVGDGDIVVRKKKKPKASSSNEAGEGTKTS
SGSSKKRKTSAESGAGPKKTPKVPDQQAVLADRLTGSVESSSSAQQRLGE
GASMTPSVDGVISTAPGATADAASSAAAVSFSGDANGSGAAASVPQEGDG
ASSGNGGITTPKNSDARNKDSSVTDAAGAGAAASAANAFENGGTGGGGKG
GSGEKNGKNGTKPPALSWDPDLETAMTKFEEDSKAWVKGDRAAGEEANRV
FEDMRALDVFARRTLADVHNSRTYLMRLAAVYGNPPLEMKTMLIELKERE
DQEECTRLQQEFDALRSVFVSEVAASVGQLAATGQPLTPPFSWSDNLRGH
LHDMLKAFEAWSLKEHGGRTRQALTDTKSLYDQLAQEWPAELSMTADCLR
KMFNNEKRRIKSKANKEAAAEAGPAVATDTTAPPLPSSSAAATAVTPSSQ
NNPPANQSTTATSVAPAANNGGTGGFVDDPDRQLQSGLTMPPPALQRQQA
PKTPGVPPRSSKETSTSSNSTATSPGTPFPAPSPGQQQVLPLAGGGGEGG
TLSFAEASAATVTPALKPEYLPPLGSRFDLPPSFDPRNFREEMDDGDDVA
PVMLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014840HRD