prot_A-nodosum_M_contig113.41.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig113.41.1
Unique Nameprot_A-nodosum_M_contig113.41.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length792
Homology
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 4.410e-93
Identity = 252/773 (32.60%), Postives = 304/773 (39.33%), Query Frame = 0
Query:   38 ACCVEECGLCGGSGCAEVGGVNSTLTANDCCSSEILESDVFCVDTGVAPCILTADVTGDFNSTCSNDLPGFEDTVNLVCCDVACGLCGGSGCGNVVGLTGNDC-CSETIATNGTLCSVAGEAPCIIDLPEVTSNNTCSNGFSGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGSD-CCSSTISTTGTLCSVAGEAPCILELPDVTTNNTCSNDFPGFEDSVNGVCCDAACGLCGGAGCGNV-PGLTGNDCCSETIANNGTLCSLAGEAPCILD--LPEVTS-----------------------------------------NSTCSNGFPGFEDTVNFVCCDVGCGLCGGPGCGNVR-GLTGNDCCSETIATNGTLCSVAGEAPCILELPD-------------------------------VTSNDTCSNGFSGFEDTVNFVCCDAACGLCGGPGCGNV-PGLTGNECCSETIATNGTLCSVAGEAPCILE--IPEVTS-----------------------------NSTCSNGLPGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGND-CCSETIATNGTSCSVAGEAPCILELPEVTSNSTCSNGLSGFEDTVNFVCCDVACGLCGGPGCGNVPG-LSGDDCCSGTIATNGTLCSVTGAAPCIID-------------------------PPEV----------TPSMCPNGLAGVQDGNVCCAEACNGVXXXXXXXXXXXXXXSSDCCSAIILEGGVFCVDGVDAPC 663
            ACC+ ECG CGG  C  +GG    L A +CC S I+E    C     APC +  ++ G                V   CC   CG                   C   I   G +CS+A EAPC ++       + CSNGF G +      CC   CG CGG  C  + G  G++ CC S I   G LCS+A EAPC LE       +TCSN FPG +      CC A CG CGG+ C     GL   +CC   I  +G LCS+A EAPC LD   PE TS                                            CSNGFPG +      CC   CG CGG  C     GL   +CC   I   G LCS+A EAPC L+ P                                    D CSNG  G +      CC A CG CGG  C     GL    CC   I   G LCS+A EAPC L+   PE T                                TCSNG+PG +      CC   CG CGG  C    G  G D CC   I  +G  CS+A EAPC L+         CS+G+ G        CC   CG CGG GC    G L  D+CC G I  +G LCS+T  APC++D                         PP +           P MC NG+ G+Q G+ CC   C G               + +CC + I+E G  C   ++APC
Sbjct:  255 ACCLAECGGCGGLDCDALGG---GLGAENCCESRIVEHGELCSIALEAPCYIDGEMNG----------------VGNACCLAECGXXXXXXXXXXXXXXXXXXXCESDIVERGEICSIALEAPCYLE-------DMCSNGFPGIQS--GNACCLAECGGCGGSDCDALGGGLGAENCCESDIVERGELCSIALEAPCYLE-------DTCSNGFPGIQSG--NACCLAECGGCGGSDCDQFGDGLGAENCCESDIVEHGELCSIALEAPCYLDEPTPEPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGFPGIQS--GNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGIPGIQS--GNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDTCSNGMPGIQS--GNACCLAECGACGGSDCDAFGGGLGADNCCESDIVEHGELCSIALEAPCYLD-------DVCSDGIPGIRS--GNACCLAECGACGGSGCDEFGGGLGADNCCEGNIEEHGELCSITLEAPCVVDGRLVADTVPCPSCLMVCLSEHGLTLPPSLFRISSRYSSLPPDMCSNGIPGIQSGSACCLAEC-GACGGLDCDEFGGGLGADNCCVSDIVEHGELCSIALEAPC 974          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.700e-92
Identity = 158/319 (49.53%), Postives = 188/319 (58.93%), Query Frame = 0
Query:  389 CSNGFSGFEDTVNFVCCDAACGLCGGPGC--GNVPGLTGNECCSETIATNGTLCSVAGEAPCILEIPEVTSNSTCSNGLPGFEDTVNFVCCDVACG-LCGGPGCGNVPGLTGNDCCSETIATNGTSCSVAGEAPCILELPEVTSNSTCSNGLSGFEDTVNFVCCDVACGLCGGPGCGNVPGLSGDDCCSGTIATNGTLCSVTGAAPCIIDPPEVTPSMCPNGLAGVQDGNVCCAEACNGVXXXXXXXXXXXXXXSSDCCSAIILEGGVFCVDGVDAPCIMVNGTFTPAPSFTTAMPTITPREVM-FTAAPTVEGQTEAP 703
            CSNG  G + T   VCC   C +CGG  C   N   LT  +CC+  I  +GT C V+  APCI+      ++S C NG  G  D    VCC + CG  CGG GCG++PG+    CCS  I  +G  CS    APC++   E  +++TCSNG+ G ED VN +CCD ACGLCGGPGCGNV GL+G DCCS  IA    LCSVT  APC++DPP+   S CPNGLAGVQDG+VCCAE CNGV              + DCCS  IL  GV C +GV APCIM+NGT+T AP    A PT  P      T AP     TEAP
Sbjct:   30 CSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLDCCSEEIAVVNDLCSVTNEAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAPM---AAPTFPPAAAPGTTVAPGAVAATEAP 345          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 2.240e-89
Identity = 170/336 (50.60%), Postives = 205/336 (61.01%), Query Frame = 0
Query:  377 ILELPDVTSNDTCSNGFSGFEDTVNFVCCDAACGLCGGPGC--GNVPGLTGNECCSETIATNGTLCSVAGEAPCILEIPEVTSNSTCSNGLPGFEDTVNFVCCDVACG-LCGGPGCGNVPGLTGNDCCSETIATNGTSCSVAGEAPCILELPEVTSNSTCSNGLSGFEDTVNFVCCDVACGLCGGPGCGNVPGLSGDDCCSGTIATNGTLCSVTGAAPCIIDPPEVTPSMCPNGLAGVQDGNVCCAEACNGVXXXXXXXXXXXXXXSSDCCSAIILEGGVFCVDGVDAPCIMVNGTFTPAPSF------TTAMPTITPREVMFTAAPTVEGQTEAP 703
            +L L       TC+ G SG E T   VCC   CG CGG GC   N   LT N+CC+  I+ +G +CS  G APCIL     +++S C NG  G +D    VCC + CG  CGG GCG +PG+  + CC+  I  +G  C    EAPC  ++    ++S CSNG  G E+    VCCD AC +CGG  CGNV GL+G DCC+GTI  N  LCS  G+APC++DPPEVT S C NGLAGV  G+VCCAE CNGVXXXXXXXXXXX   + DCCSA IL   + CVD   APC+MV GTFTPAP+       TT  P + P E + T APT   QT AP
Sbjct:   13 VLALAGSVGAQTCAGGISGVESTSLDVCCTLECGTCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPC-TQVAVAVADSVCSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVDPPEVTASTCANGLAGVSSGSVCCAEVCNGVXXXXXXXXXXXTNGAEDCCSATILAANIACVD--TAPCVMVEGTFTPAPAVVPTVAATTTAP-LAPGETV-TMAPTPTSQTAAP 343          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 7.840e-89
Identity = 272/927 (29.34%), Postives = 337/927 (36.35%), Query Frame = 0
Query:   23 VCTGGIAGVEAVSQPACCVEECGLCGGSGCAEVGGVNSTLTANDCCSSEILESDVFCVDTGVAPCILTADVTGDFNSTCSNDLPGFEDTVNLVCCDVACGLCGGSGCGNVVGLTGND-CCSETIATNGTLCSVAGEAPCIID--LPEVTS-----------------------------------------------------NNTCSNGFSGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGSD-CCSSTISTTGTLCSVAGEAPCILELPD---------------------------------------------------------------VTTNNTCSNDFPGFEDSVNGVCCDAACGLCGGAGCGNVPGLTGND-CCSETIANNGTLCSLAGEAPCILD------LPEVTS-------------------------------NSTCSNGFPGFEDTVNFVCCDVGCGLCGGPGCGNVRGLTGND-CCSETIATNGTLCSVAGEAPCILE--------LPDVTS----------------------NDTCSNGFSGFEDTVNFVCCDAACGLCGGPGCGNVPG-LTGNECCSETIATNGTLCSVAGEAPCILEIPEVTSNSTCSNGLPGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGND-CCSETIATNGTSCSVAGEAPCILE----LPEVTSNST---------------------------------CSNGLSGFEDTVNFVCCDVACGLCGGPGCGNV-PGLSGDDCCSGTIATNGTLCSVTGAAPCIIDPPEVTPS--------------------------------------MCPNGLAGVQDGNVCCAEACNGVXXXXXXXXXXXXXXSSDCCSAIILEGGVFCVDGVDAPCIMVNGTFTPAPSFTTAMPT 682
            VC+ G  G+E  S  ACC+ ECG CGGS C  +GG    L A +CC S+I+E    C     APC L           CSN  PG +      CC   CG CGGS C  + G  G D CC   I   G LCS+A EAPC ++   PE T                                                       +TCSNGF G +      CC   CG CGG  C  + G  G++ CC S I   G LCS+A EAPC ++ P                                                                      CSN FPG +      CC A CG CGG+ C    G  G D CC   I  +G LCS+A EAPC +D       P V                                    CSNG PG +    F CC   C  CGG GC    G  G D CC   I  NG LCS+  +APC+++        + + T+                       D CSNGF G +      CC A CG CGG  C    G L  + CC   I  +G LCS+A EAPC ++        TCSNG+PG +      CC   CG CGG  C    G  G D CC   I  +G  CS+A  APC ++     P   +  T                                 CSNG+ G +  V+  CC   CG CGG  C     GL  D+CC   I   G LCS+   APC++D     PS                                       C NG+ G+Q  N CC   C G               + +CC + I+E G  C   ++APC + +    P+P    AMPT
Sbjct:  459 VCSNGFPGIE--SGNACCLAECGGCGGSDCDALGG---GLGAENCCESDIVEHGELCSVALEAPCYL--------EDVCSNGFPGIQS--GNACCLAECGGCGGSDCDALGGGLGADNCCESDIVERGELCSIALEAPCYLEEPAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDTCSNGFPGIQS--GNACCLAECGGCGGSDCDALGGGLGAENCCESDIVEHGELCSIALEAPCYIDEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTGMCSNGFPGIQSG--NACCLAECGACGGSDCDEFGGGLGADNCCESDIVEHGELCSIALEAPCYIDDAAPAPSPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDVCSNGIPGVQS--GFACCLAECVACGGSGCDEFGGGLGADNCCEGNIEENGELCSITLQAPCVVDDSAPAPSPVAEPTAXXXXXXXXXXXXXXXXXXXXXXTDMCSNGFPGIQS--GNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALEAPCYID-------ETCSNGIPGIQ--TGNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALAAPCYIDDSSPAPSPVAEPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQSGVS--CCLAECGECGGSDCAEYGDGLGADNCCQSNIEEYGELCSIKLEAPCVVDDSAPAPSPVTMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTCSNGIPGIQSDNACCLAEC-GACGGSDCDEFGGGLGADNCCVSDIVEHGEPCSIALEAPCYIDDSAPAPSP---VAMPT 1347          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 6.920e-49
Identity = 145/401 (36.16%), Postives = 183/401 (45.64%), Query Frame = 0
Query:  239 VTTNNTCSNDFPGFEDSVNGVCCDAACGLCGGAGCGNV-PGLTGNDCCSETIANNGTLCSLAGEAPCILDLPEVTSNSTCSNGFPGFEDTVNF-VCCDVGCGLCGGPGCGNVRGLTGNDCCSETIATNGTLCSVAGEAPCILELPDVTSNDTCSNGFSGFEDTVNFV----CCDAACGLCGGPGCGNVPG-LTGNECCSETIATNGTLCSVAGEAPCILE---------------IPEVTSNSTCSNGLPGFEDTVNFVCCDVACGLCGGPGCGNVPG-LTGNDCCSETIATNGTSCSVAGEAPCILE----------LPEVTSNSTCSNGLSGFEDTVNFVCCDVACGLCGGPGCGNVP-GLSGDDCCSGTIATNGTLCSVTGAAPCIIDPPEVTPSMCP 605
            V    TC     G        CC A C  CGG+GC +   GLTG DCC+  I   G  C   G APC+L+  E +S +  S+G  G +  +   VCC   CG CGG GCG+  GLT N+CC+ TIA     C   G APC+++     +        SG       +    CC A C  CGG GC +  G LTG +CC+  I+    LCSV G APCI++                   + + TC   L G        CC   C  CGG GC +  G LTG DCC+  I+     CSV G APCI++              + + TC   L G        CC   CG CGG        GL+G DCC+  I+    LCSVTGAAPCI+D     P+  P
Sbjct:   15 VAKGQTCDGILKGI------YCCSAGCEECGGSGCSDRGDGLTGADCCTSDILAAGKAC---GSAPCLLE--EGSSPTPASSG--GCDGILQGDVCCSAECGTCGGSGCGSRAGLTANECCTSTIAAANVPC---GSAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCDGVLKGDY------CCSAGCVECGGSGCSDRGGGLTGADCCTSDISNL---CSVTGAAPCIVDGDTSPTXXXXXXXXSGSFTCDGVLKGDY------CCSAGCGECGGXXXXXXXXGLTGADCCTSDISN---LCSVTGAAPCIVDGDSTGPTPTP 378          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 4.210e-41
Identity = 97/223 (43.50%), Postives = 115/223 (51.57%), Query Frame = 0
Query:  100 TCSNDLPGFEDTVNLVCCDVACGLCGGSGC---GNVVGLTGNDCCSETIATNGTLCSVAGEAPCIID---LPEVTSNNTCSNGFSGFEDTVNFVCCDVACGLCGGPGC---GNVPGLTGSDCCSSTISTTGTLCSVAGEAPCIL---ELPDVTTNNTCSNDFPGFEDSVNGV-CCDAACGLCGGAGC---GNVPGLTGNDCCSETIANNGTLCSLAGEAPCIL 306
            TCSN L G  D   +VCC +ACG CGG+GC   G   GL G+ CC   +  +   C    EAPCII     P  TS NTCSNG  G +     VCC + CG CGG GC   G   GL GS CC  +I  +G  C    +APCI+     P  T + TCSN   G +   NGV CC   CG CGGAGC   G   GL  + CC  +I  +   C    EAPCI+
Sbjct:  192 TCSNGLEGI-DANGVVCCPLACGQCGGTGCNTSGAAFGLDGSSCCGGGVKASDEYCDETNEAPCIIGSRPTPSPTSANTCSNGLEGIDGN-GVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCSNGVEGIDG--NGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCII 410          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 1.950e-40
Identity = 80/185 (43.24%), Postives = 108/185 (58.38%), Query Frame = 0
Query:   13 IVSTLTSVGAVCTGGIAGVEAVSQPACCVEECGLCGGSGCAEVGGVNSTLTANDCCSSEILESDVFCVDTGVAPCILTADVTGDFNSTCSNDLPGFEDTVNLVCCDVACG-LCGGSGCGNVVGLTGNDCCSETIATNGTLCSVAGEAPCIIDLPEVTSNNTCSNGFSGFEDTVNFVCCDVACGLC 196
            +V T+T  GAVC+ G+ G+++ S  ACCVEECGLCGG GC       S+LT+ DCC++EI+ES   C  +  APCI+T     + +S C N   G +D    VCC + CG  CGG GCG++ G+    CCS  I  +G +CS    APC++   E  ++ TCSNG  G ED VN +     C  C
Sbjct:   19 LVGTMTPAGAVCSNGLEGIQSTSLDACCVEECGLCGGVGCTPAN--TSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASN-DSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLIWYVWMCSAC 200          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.450e-34
Identity = 134/499 (26.85%), Postives = 164/499 (32.87%), Query Frame = 0
Query:  155 AGEAPCIIDLPEVTSNNTCSNGFSGFEDTVNFVCCDVACGLCGGPGCGNV--PGLTGSDCCSSTISTTGTLCSVAGEAPCILELPDVTT------------------------------NNTCSNDFPGFEDSVNGVCCDAACGLCGGAGCGNVPGLTGND-CCSETIANNGTLCSLAGEAPCILDLPEVTSNSTCSNGFPGFEDTVNFVCCDVGCGLCGGPGCGNVRGLTGNDCCSETIATNGTLCSVAGEA------------------PCILELPDVTSND---TCSNGFSGFEDTVNFVCCDAACGLCGGPGCGNV--PGLTGNECCSETIATNGTLCSVAGEAPCIL-EIPEVTSNSTCSNGLPGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGNDCCSETIATNGTSCSVAGEAPCILELPEVTSNSTCSNGLSGFEDTVNFVCCDVACGLCGGPGCGNVPG-LSGDDCCSGTIATNGTLCSVTGAAPCIID 595
            + E P +    EV     CS G  G E +   VCC + C  CGG GC  V  P      CC S + + G  CSV+ EAPC+L+ P                                   + CSN  PG +   +  CC A CG CGG+GC    G  G D CC+  I   G LCS+A  APC +D P  T  +                                                                             P   E+P +   D    CS G  G E +   VCC   C  CGG GC  V  P      CC   + + G  CSV+ EAPC+L E P    N+                                                                     S   CSNG+ G +  +   CC   CG CGGPGC    G L  D+CC G I   G LCSVT AAPCI+D
Sbjct:  329 SSEMPVMAPTDEVI---VCSTGIPGIESSDGAVCCPINCTQCGGAGCATVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLDAPATEMPAMAPTPEXXXXXXXXXXXXXXXXXXXXXXGDVCSNGIPGIQSGDS--CCLAECGACGGSGCAEFGGGLGEDNCCAVRIEEYGELCSVALAAPCYVDAPPPTPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPAPSEMPVMAPTDEVVVCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLDETPTPEPNAAPXXXXXXXXXXXXXXXXXXXXXXX-----------------------------XXXXXXXXXXXXXXXSGDVCSNGIPGIQSGIT--CCLAECGECGGPGCAEFGGGLGQDNCCQGRIEEYGELCSVTLAAPCIVD 791          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 5.480e-34
Identity = 122/415 (29.40%), Postives = 150/415 (36.14%), Query Frame = 0
Query:  244 TCSNDFPGFEDSVNGV-CCDAACGLCGGAGCG---NVPGLTGNDCCSETIANNGTLCSLAGEAPCIL----DLPEVTSNS-----TCSNGFPGFEDTVNFVCCDVGCGLCGGPGCG---NVRGLTGNDCCSETIATNGTLCSVAGEAPCIL----ELPDVTSND-----TCSNGFSGFEDTVNFVCCDAACGLCGGPGCG---NVPGLTGNECCSETIATNGTLCSVAGEAPCIL----EIPEVTSNST-----------------------------CSNGLPGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGNDCCSETIATNGTSCSVAGEAPCILELPEVTSNSTCSNGLSGFEDTVNFVCCDVACGLCGGPGCGNVP---GLSGDDCCSGTIATNGTLCSVTGAAPCII 594
            TCS+   G +   NGV CC   CG C G GCG   +  GL    CC   + + G  C    EAPCI+    D  +V S S     TCS+G  G +     VCC +GCG C G GCG   +  GL    CC   + + G  C    EAPCI+    +  DV S       TCS+G  G +     VCC   CG C G GCG   +  GL    CC   + + G  C    EAPCI+    +  ++ S S                                                                                                     TCSNG+ G  D    VCC +ACG CGG GCG+     GL G  CCS  +      C  T AAPCII
Sbjct:  337 TCSDGTEGIDG--NGVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGGGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDGN-GVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDGN-GVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDIDSESADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQTCSNGIEGI-DHKGEVCCPLACGQCGGSGCGSAGSANGLDGASCCSSEVLAGNVYCEDTNAAPCII 746          
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 3.720e-32
Identity = 120/414 (28.99%), Postives = 165/414 (39.86%), Query Frame = 0
Query:  128 GCGNVVGLTGNDCCSETIATNGTLCSVAGEAPCIIDLPEVTSNNTCSNGFSGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGSDCCSSTISTTGTLCSVAGEAPCIL----ELPDVTTNNTCSNDFPGFED------------SVNGV-----CCDAACGLCGGAGCGNVPGLTGNDCCSETIANNGTLCSLAGEAPCILDLPEVT---------------------------------SNSTCSNGFPGFEDTVNFV------------------CCDVGCGLCGGPGCGNVRGLTGNDCCSETIATNGTLCSVAGEAPCILE--LPDVTSN-----DT-----------CSNGFSGFEDTVNFVCCDAACGLCGGPGCGNVPGLTGNECCSETIATNGTLCSVAGEAPCILE 451
            GCG+  GLT  DCC+ TI  +  LCSV  EAPC+ID  E  ++ TCSNG +  +     +CC   CG CGG GC    GL+G +CC+STI+     C     APC++    +L D     T                      S  GV     CC+A CG CGG             CC+   A +  LCS  G++PC++D                                      S ST +       DT + +                  CC+ GCG CGG          G  CC+   A +  LCSV G++PC+++  +P  T++     DT            S   S       + CC+A CG CGG           + CC+   A +  LCS  G +PC++E
Sbjct:   16 GCGSRPGLTKYDCCTSTIKADNHLCSVTQEAPCVID-EETEADPTCSNGVAKGD-----ICCSAGCGYCGGSGCSGRGGLSGDECCTSTIAAANKSCDDQS-APCVMSGGSDLGDTAGQTTXXXXXXXXXXXXXXXXXXSTATSCGGVAKGAFCCNAGCGTCGGT----XXXXXXEGCCTSDAAES--LCSATGKSPCLMDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASTATTITDTTTDTTSGISVADATATSCDGVSKGAYCCNAGCGTCGGX----XXXXXGEGCCTSDAALS--LCSVTGKSPCLMDSAIPATTTDIIDNTDTTXXXXXXXXXVASTATSCGGVASGYYCCNAGCGTCGG----TXXXXXXDGCCASDAALS--LCSATGMSPCLME 404          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.41.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG29_9PHAE4.410e-9332.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7R2_9PHAE1.700e-9249.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG71_ECTSI2.240e-8950.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FJ68_ECTSI7.840e-8929.34WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FWE8_ECTSI6.920e-4936.16Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JC43_9PHAE4.210e-4143.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LML5_ECTSI1.950e-4043.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ37_9PHAE1.450e-3426.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G651_ECTSI5.480e-3429.40Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
D8LDB5_ECTSI3.720e-3228.99Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 697..718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:450185..465947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.41.1mRNA_A-nodosum_M_contig113.41.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig113 450156..468409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig113.41.1 ID=prot_A-nodosum_M_contig113.41.1|Name=mRNA_A-nodosum_M_contig113.41.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=792bp
MNVATILRTSLVIVSTLTSVGAVCTGGIAGVEAVSQPACCVEECGLCGGS
GCAEVGGVNSTLTANDCCSSEILESDVFCVDTGVAPCILTADVTGDFNST
CSNDLPGFEDTVNLVCCDVACGLCGGSGCGNVVGLTGNDCCSETIATNGT
LCSVAGEAPCIIDLPEVTSNNTCSNGFSGFEDTVNFVCCDVACGLCGGPG
CGNVPGLTGSDCCSSTISTTGTLCSVAGEAPCILELPDVTTNNTCSNDFP
GFEDSVNGVCCDAACGLCGGAGCGNVPGLTGNDCCSETIANNGTLCSLAG
EAPCILDLPEVTSNSTCSNGFPGFEDTVNFVCCDVGCGLCGGPGCGNVRG
LTGNDCCSETIATNGTLCSVAGEAPCILELPDVTSNDTCSNGFSGFEDTV
NFVCCDAACGLCGGPGCGNVPGLTGNECCSETIATNGTLCSVAGEAPCIL
EIPEVTSNSTCSNGLPGFEDTVNFVCCDVACGLCGGPGCGNVPGLTGNDC
CSETIATNGTSCSVAGEAPCILELPEVTSNSTCSNGLSGFEDTVNFVCCD
VACGLCGGPGCGNVPGLSGDDCCSGTIATNGTLCSVTGAAPCIIDPPEVT
PSMCPNGLAGVQDGNVCCAEACNGVCGGEGCGSILGTEGSSDCCSAIILE
GGVFCVDGVDAPCIMVNGTFTPAPSFTTAMPTITPREVMFTAAPTVEGQT
EAPTQTPTQIPTPTPTAAPSALNVSVPTAAPSEASMAPTVVTTPQMPTPG
PLMMNTSAPTSSGATTPSTGNLVTFAALVVGTFAIFAAARH*
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