prot_A-nodosum_M_contig1128.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1128.5.1
Unique Nameprot_A-nodosum_M_contig1128.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length98
Homology
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BLAST of mRNA_A-nodosum_M_contig1128.5.1 vs. uniprot
Match: A0A6P7FUW9_DIAVI (ankyrin-1-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FUW9_DIAVI)

HSP 1 Score: 54.7 bits (130), Expect = 1.600e-6
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 0 
Query:    3 PLQLAVDGGHLDAVNALLEAGADPNQ-EFGGKCVLYYSILRSRRDIMASLLLHGADVNK-KVEGCLTVLNVAVGLQDPRMVNDLLGAGANV 91
            PL LA   G+LDAV  L+E GA+ N+ +  G   L+ +     + +   LL HGAD+N  +     T LN++ G+ D  MV  L+ AGAN+
Sbjct:   54 PLHLASRLGNLDAVQQLIEGGAEINEVDSSGLTALHVATFSQHKKVAKYLLAHGADLNAIETYQQETPLNISTGINDHEMVRLLIEAGANM 144
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BLAST of mRNA_A-nodosum_M_contig1128.5.1 vs. uniprot
Match: A0A830GTV2_9CREN (Uncharacterized protein n=1 Tax=Thermocladium modestius TaxID=62609 RepID=A0A830GTV2_9CREN)

HSP 1 Score: 50.4 bits (119), Expect = 4.250e-5
Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:    1 MIPLQLAVDGGHLDAVNALLEAGADPNQ-------EFGGKCVLYYSILRSRR---DIMASLLLHGADVNKKVEGCLTVLNVAVGLQDPRMVNDLLGAGANV 91
            + PL  AV+ GH   V  LL+ GA+PN        +F  K      +  S+    D++ +L+ +GADVN K EG    L +AV  QDP +V  LL +GA+V
Sbjct:   38 LTPLHWAVNAGHAQIVEILLQNGANPNMLNTPVGSDFN-KIFTPLQLAASKNVNYDVIRTLIRYGADVNSK-EGSPPPLIIAVMKQDPTLVKLLLDSGADV 136
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1128.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6P7FUW9_DIAVI1.600e-638.46ankyrin-1-like n=1 Tax=Diabrotica virgifera virgif... [more]
A0A830GTV2_9CREN4.250e-537.62Uncharacterized protein n=1 Tax=Thermocladium mode... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..28
e-value: 2.5
score: 17.1
coord: 31..60
e-value: 450.0
score: 7.6
coord: 64..93
e-value: 260.0
score: 9.4
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 4..92
e-value: 1.7E-8
score: 34.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..27
score: 10.01842
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..97
e-value: 9.3E-19
score: 69.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..92
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 32..92
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 1..27
score: 9.993605

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1128contigA-nodosum_M_contig1128:54631..54924 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1128.5.1mRNA_A-nodosum_M_contig1128.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1128 54631..54924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1128.5.1 ID=prot_A-nodosum_M_contig1128.5.1|Name=mRNA_A-nodosum_M_contig1128.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=98bp
MIPLQLAVDGGHLDAVNALLEAGADPNQEFGGKCVLYYSILRSRRDIMAS
LLLHGADVNKKVEGCLTVLNVAVGLQDPRMVNDLLGAGANVNNGVSYE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf