prot_A-nodosum_M_contig1122.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1122.9.1
Unique Nameprot_A-nodosum_M_contig1122.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length333
Homology
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BLAST of mRNA_A-nodosum_M_contig1122.9.1 vs. uniprot
Match: D7G1U7_ECTSI (CUE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U7_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 2.330e-97
Identity = 191/348 (54.89%), Postives = 225/348 (64.66%), Query Frame = 0 
Query:    1 MAAISTEAAVEQLHQMFGDYDKETLSAILQANGGNMERTVEQLLGNP---SGGSDTGVGGXXXXXXXXSR-TDHDAALALQLSREWGDDPTTAPPPPTRPVGIPSPYD--------RPAAGGGDGGGVSAVVEKGSAQGTCSRALEMCVCVGLTHTGGTSGRRGRRVALPENFLRLPGWHAGGEG--SGDPQVAADARLAMMLQNQSFQRELQAHPDLAFLGRPLGAQNTSYASRGRFESASGPTIREQLTAMGNDVRRELDKFAVRWKMKNPGRVEDTTGDHGSSVPLMSAQGDDFDDQAEVVHFSQDSATRRSHATSTGAA-GSFAVDSGGDELLADPRRS-KKDR 332
            MA ISTE AVEQLHQMFGDYDK  L+ +L+A+GG++ERTVE LL NP   SG        XXXXXXX SR TDHDAALALQLSREW D+PT  PPPP RP GIP+PY                                                   +  RRGRRVALPE FLR PGW  GG G  S DPQVAADA+LAMMLQN++FQRELQ+HPDLA+LGR  G+++             GP+I+EQ+T+MGND+RR++D+ AVRWKMK+PGR + TT    SSVPLMS+  DD DDQAEVVHFSQ++ATRRS +  + A  G F  DS G+E LADPRR+ KKDR
Sbjct:    1 MAEISTEDAVEQLHQMFGDYDKTALANVLEAHGGHVERTVEHLLSNPQAASGXXXXXXXXXXXXXXXASRGTDHDAALALQLSREWSDEPTNMPPPPVRPQGIPTPYGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQNEAFQRELQSHPDLAYLGR--GSRSGDSRGNAFGMGGDGPSIKEQMTSMGNDIRRKVDELAVRWKMKDPGRADQTT--EYSSVPLMSSVDDDADDQAEVVHFSQNNATRRSSSGGSAAGVGVFRADSAGEEQLADPRRANKKDR 344
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1122.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1U7_ECTSI2.330e-9754.89CUE domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003892Ubiquitin system component CUESMARTSM00546cue_7coord: 5..47
e-value: 0.0016
score: 27.7
IPR003892Ubiquitin system component CUEPFAMPF02845CUEcoord: 7..45
e-value: 7.0E-11
score: 41.6
IPR003892Ubiquitin system component CUEPROSITEPS51140CUEcoord: 5..47
score: 14.373779
NoneNo IPR availableGENE3D1.10.8.10coord: 3..51
e-value: 3.3E-12
score: 47.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..311
NoneNo IPR availableCDDcd14279CUEcoord: 7..44
e-value: 1.29421E-11
score: 56.7077
IPR040192CUE domain-containing protein 1PANTHERPTHR13467CUE DOMAIN CONTAINING PROTEIN 1coord: 6..276
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 5..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1122contigA-nodosum_M_contig1122:123125..138174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1122.9.1mRNA_A-nodosum_M_contig1122.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1122 121673..138257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1122.9.1 ID=prot_A-nodosum_M_contig1122.9.1|Name=mRNA_A-nodosum_M_contig1122.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=333bp
MAAISTEAAVEQLHQMFGDYDKETLSAILQANGGNMERTVEQLLGNPSGG
SDTGVGGGGGVESSSSRTDHDAALALQLSREWGDDPTTAPPPPTRPVGIP
SPYDRPAAGGGDGGGVSAVVEKGSAQGTCSRALEMCVCVGLTHTGGTSGR
RGRRVALPENFLRLPGWHAGGEGSGDPQVAADARLAMMLQNQSFQRELQA
HPDLAFLGRPLGAQNTSYASRGRFESASGPTIREQLTAMGNDVRRELDKF
AVRWKMKNPGRVEDTTGDHGSSVPLMSAQGDDFDDQAEVVHFSQDSATRR
SHATSTGAAGSFAVDSGGDELLADPRRSKKDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003892CUE
IPR040192CUEDC1
IPR009060UBA-like_sf