prot_A-nodosum_M_contig1122.17.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1122.17.2
Unique Nameprot_A-nodosum_M_contig1122.17.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length321
Homology
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: D7G1U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U5_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 3.150e-116
Identity = 170/195 (87.18%), Postives = 180/195 (92.31%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            VSE  LASGDDQGVIK+WDTR+K+EVAKF+VN DFIS   TNE  DKLLATSGDATLAVFDLR+ +LEGRVTNQEDELLSIQI+KNG RVVCGTQNGVLV+WPWGTWGDRSSRFRGHPHSVDTLL LDEDTVLTGSSDGIIRVVSIQPD FLGLLGDHEDFPVESI+FSRDK WIGSVSHD+ IRFWHA YLFEE
Sbjct:  112 VSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEESDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGRRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEE 306          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: K3WEM9_GLOUD (ANAPC4_WD40 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEM9_GLOUD)

HSP 1 Score: 256 bits (655), Expect = 5.220e-80
Identity = 118/195 (60.51%), Postives = 151/195 (77.44%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            +S    +SGDDQG +KIWDTR    +A+F+ ++DFIS   TN AGD LLATSGD  L+V+DLR+N L G+    +DELLS+ ++KNG +VVCG+Q+GVLV + WGTWGD S RF GHP SV+T+LK+DEDT+LTGSSDGIIRVV + P+  LGL+GDHEDFPVE +KFS DK  +GSVSH +K+ FW   YLF++
Sbjct:  111 LSANVFSSGDDQGCVKIWDTRQHRCLAEFKEHTDFISGFATNLAGDHLLATSGDGRLSVYDLRKNVLTGKSDELDDELLSVSVIKNGKKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETVLKVDEDTILTGSSDGIIRVVQVHPNKLLGLIGDHEDFPVEMLKFSHDKRLVGSVSHTNKVHFWDVGYLFDD 305          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A662WRV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRV0_9STRA)

HSP 1 Score: 253 bits (646), Expect = 5.280e-80
Identity = 116/195 (59.49%), Postives = 150/195 (76.92%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            +S   +ASGDDQG IKIWDTR    +++F+ ++D+IS   TN A D LLATSGD  L+ +DLR+N L G+    +DELLS+ ++KNG ++VCG+Q+GVLV + WGTWGD S RF GHP SV+ +LK+DEDT+LTGSSDGI+RVV + P+  LGL+GDHEDFPVE++KFS DK  IGSVSH +K+ FW   YLFEE
Sbjct:    9 LSANVIASGDDQGCIKIWDTRQHRCLSEFKEHTDYISGFATNPAQDHLLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGKKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEAILKVDEDTILTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVETLKFSHDKKIIGSVSHTNKVHFWDVGYLFEE 203          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A5D6XKA4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKA4_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.500e-78
Identity = 116/194 (59.79%), Postives = 148/194 (76.29%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFE 195
            +S+   +SGDD G +KIWDTR    +A+F+ ++DFIS   TN A D LLATSGD  L+V+DLR+N L G+    +DELLS+ ++KNG +VVCG+Q+GVLV + WGTWGD S RF GHP SVD +LK+DEDT+LTGSSDGIIRVV + P+  LGL+GDHEDFPVE +KFS DK  +GSVSH +K+ FW   YLF+
Sbjct:  111 LSQHVFSSGDDMGCVKIWDTRQHRCLAEFKEHTDFISGFATNPAQDHLLATSGDGRLSVYDLRKNVLAGKSDELDDELLSVAVIKNGKKVVCGSQDGVLVVFSWGTWGDMSDRFPGHPDSVDAMLKIDEDTILTGSSDGIIRVVQLHPNKLLGLIGDHEDFPVEVLKFSHDKKLVGSVSHTNKVHFWDVGYLFD 304          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A6A3F0F6_9STRA (ANAPC4_WD40 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F0F6_9STRA)

HSP 1 Score: 251 bits (641), Expect = 5.910e-78
Identity = 116/195 (59.49%), Postives = 149/195 (76.41%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            +S    ASGDDQG +KIWDTR    +++F+ ++D+IS   TN A D LLATSGD  L+ +DLR+N L G+    +DELLS+ ++KNG ++VCG+Q+GVLV + WGTWGD S RF GHP SV+ LLK+DEDTVLTGSSDGI+RVV + P+  LGL+GDHEDFPVE++KFS DK  IGSVSH +K+ FW   YLF+E
Sbjct:  110 LSANVFASGDDQGCVKIWDTRQHRCLSEFKEHTDYISGFATNPAQDHLLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVEALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENMKFSHDKKIIGSVSHTNKVHFWDVGYLFDE 304          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A3M6VF45_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)

HSP 1 Score: 251 bits (640), Expect = 9.130e-78
Identity = 119/195 (61.03%), Postives = 146/195 (74.87%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            +S    ASGDD G IKIWDTR    +A+F+ ++D+IS   TN A D LLATSGD  L  +DLR+N L G+    +DELLS+ ++KNG ++VCG+QNGVLV + W TWGD S RF GHP SVD LLK+DEDTVLTGSSDGI+RVV + P+  LGL+GDHEDFPVE++KFS DK  IGSVSH +K+ FW   YLFEE
Sbjct:  110 LSANVFASGDDLGCIKIWDTRQHRCLAEFKEHTDYISGFATNPAQDHLLATSGDGRLTAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQNGVLVIFSWDTWGDMSDRFPGHPDSVDALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENLKFSYDKKIIGSVSHTNKVHFWDVGYLFEE 304          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A0P1A5F6_PLAHL (Transducin family protein wd-40 repeat family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5F6_PLAHL)

HSP 1 Score: 250 bits (638), Expect = 1.530e-77
Identity = 116/195 (59.49%), Postives = 149/195 (76.41%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            +SE    SGDDQG IKIWDTR    +A+F+ +SD+IS   TN + D LLATSGD  L+ ++LR+N L G+    +DELLS+ ++KNG +VVCG+Q+GVLV + WGTWGD S RF GHP SV+TLLK+DEDTVLTGSSDGI+RVV + P+  LGL+GDHED PVE++KFS D+  IGSVSH +K+ FW   +LFE+
Sbjct:  110 LSENVFVSGDDQGCIKIWDTRQHRCLAEFKEHSDYISGFATNPSQDHLLATSGDGRLSAYNLRKNALVGKSDELDDELLSVTVIKNGRKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETLLKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDLPVENLKFSHDRKMIGSVSHTNKVHFWDVGFLFED 304          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A836CBA8_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA8_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.600e-76
Identity = 122/207 (58.94%), Postives = 150/207 (72.46%), Query Frame = 0
Query:    3 SEETLASGDDQGVIKIWDTRSKSE---VAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRD----------KAWIGSVSHDSKIRFWHAEYLFEE 196
            S   +ASGDD G +K+WD R+ +    V    VN+DFISDM  + A   LLATSGDATL+VFDLR NKL GR  +QEDELLS+Q+LK G +V CGTQNGV+  W WGTWGD S RF GHPHSVD LLK+DE+T+LTGSSDG+IRVVS+QP+ FLG+LGDH  FP+E +  SR           ++WI SV+HDSK+RFW A  L ++
Sbjct:  105 SVHLVASGDDAGGVKLWDARAAATAKPVMAVAVNTDFISDMACDRAAAFLLATSGDATLSVFDLRANKLAGRSDDQEDELLSVQVLKGGRKVACGTQNGVIALWSWGTWGDCSDRFPGHPHSVDALLKIDEETLLTGSSDGLIRVVSVQPNKFLGVLGDHGGFPIERLALSRSGGGSCGAAVARSWIASVTHDSKVRFWDASVLNDD 311          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A8K1CJS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJS9_PYTOL)

HSP 1 Score: 246 bits (629), Expect = 3.250e-76
Identity = 112/196 (57.14%), Postives = 148/196 (75.51%), Query Frame = 0
Query:    1 MVSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            ++S + +ASGDDQG IKIWDTR    V +++ ++D+IS   TN A D L+AT GD  L+ +DLR+N L G+    +DELLS+ ++KNG ++VCG+Q+GVLV + WGTWGD S RF GHP SVD +LK+DEDTVLTGSSDGI+RVV + P+  LGL+GDHEDFPVE++K S D+  IGSVSH +K+ FW   YLF +
Sbjct:  109 VLSNDIIASGDDQGCIKIWDTRQHRCVVEWKEHTDYISGFATNPAVDHLIATGGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVDAILKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDFPVENLKLSHDQKIIGSVSHTNKVHFWDVSYLFND 304          
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Match: A0A0W8CRV6_PHYNI (ANAPC4_WD40 domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8CRV6_PHYNI)

HSP 1 Score: 246 bits (629), Expect = 3.440e-76
Identity = 119/195 (61.03%), Postives = 146/195 (74.87%), Query Frame = 0
Query:    2 VSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLLATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVLVTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPDNFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEE 196
            +S    ASGDDQG IKIWDTR    +A+F  + D+IS   TN A D LLATSGD  L+ +DLR+N L G+    +DELLS+ ++KNG ++VCG+Q+GVLV + WGTWGD S RF GHP SV+ LLK+DEDTVLTGSSDGI+R VS  P+  LGL+GDHEDFPVE++KFS DK  IGSVSH +K+ FW   YLFEE
Sbjct:  110 LSANVFASGDDQGCIKIWDTRQHRCLAEFTEHKDYISGFATNPAQDHLLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEALLKVDEDTVLTGSSDGIVRYVST-PNKLLGLIGDHEDFPVENLKFSHDKKIIGSVSHTNKVHFWDVGYLFEE 303          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1122.17.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U5_ECTSI3.150e-11687.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WEM9_GLOUD5.220e-8060.51ANAPC4_WD40 domain-containing protein n=1 Tax=Glob... [more]
A0A662WRV0_9STRA5.280e-8059.49Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A5D6XKA4_9STRA2.500e-7859.79Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3F0F6_9STRA5.910e-7859.49ANAPC4_WD40 domain-containing protein n=19 Tax=Phy... [more]
A0A3M6VF45_9STRA9.130e-7861.03Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A0P1A5F6_PLAHL1.530e-7759.49Transducin family protein wd-40 repeat family prot... [more]
A0A836CBA8_9STRA1.600e-7658.94WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A8K1CJS9_PYTOL3.250e-7657.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8CRV6_PHYNI3.440e-7661.03ANAPC4_WD40 domain-containing protein n=4 Tax=Pero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 23..62
e-value: 0.87
score: 17.4
coord: 65..104
e-value: 32.0
score: 7.5
coord: 149..189
e-value: 0.014
score: 24.6
coord: 107..146
e-value: 150.0
score: 3.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 156..188
e-value: 0.0014
score: 19.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..29
score: 8.67045
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..201
e-value: 1.2E-28
score: 102.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..320
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 32..287
NoneNo IPR availablePANTHERPTHR19855:SF23WD REPEAT-CONTAINING PROTEIN JIP5coord: 32..287
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1122contigA-nodosum_M_contig1122:158870..164833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1122.17.2mRNA_A-nodosum_M_contig1122.17.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1122 157498..165272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1122.17.2 ID=prot_A-nodosum_M_contig1122.17.2|Name=mRNA_A-nodosum_M_contig1122.17.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=321bp
MVSEETLASGDDQGVIKIWDTRSKSEVAKFEVNSDFISDMTTNEAGDKLL
ATSGDATLAVFDLRRNKLEGRVTNQEDELLSIQILKNGSRVVCGTQNGVL
VTWPWGTWGDRSSRFRGHPHSVDTLLKLDEDTVLTGSSDGIIRVVSIQPD
NFLGLLGDHEDFPVESIKFSRDKAWIGSVSHDSKIRFWHAEYLFEEDDDD
NEEEGEEKEGGDTMEEAAASHKGVGGEWPAGGTKKAVGKAKMDTDDEADS
DSGGDRDGDVGDGDNDDENDSSDDEDMGDAGGSSSSAGGKRSRGKRKKGG
GRDASGAMPPTANEQFFADL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf