prot_A-nodosum_M_contig1122.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1122.15.1
Unique Nameprot_A-nodosum_M_contig1122.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length185
Homology
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.900e-118
Identity = 177/184 (96.20%), Postives = 182/184 (98.91%), Query Frame = 0
Query:    1 MSALEEKSQAADAPVAEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            MSALEEKSQAADAP A+E+ED RSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPL+SANM+DVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIR+TFNIVNDFTPEEEAQVREENKWCEDA
Sbjct:    1 MSALEEKSQAADAP-ADETEDTRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 183          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.710e-94
Identity = 141/184 (76.63%), Postives = 162/184 (88.04%), Query Frame = 0
Query:   10 AADAPVAE---------ESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            AA AP AE         ++ED R+V+LVSQEG+SFD+ + VAKMS LVKTMID+DA+ED +AQEIPLPNVK+SVL+K+IEFC HY EDPMNEIEKPL+SANM +VVQ+W+A FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    4 AAAAPAAEAAPAAATETQAEDTRTVNLVSQEGDSFDVSIKVAKMSELVKTMIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLKSANMQEVVQDWFANFVQVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 187          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA)

HSP 1 Score: 279 bits (714), Expect = 8.960e-94
Identity = 142/182 (78.02%), Postives = 160/182 (87.91%), Query Frame = 0
Query:    3 ALEEKSQAADAPVAEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            A  E + A  AP AEE+   R+VHLVSQEG+SFD+ V VAKMS LVKTM+DE+ EED +AQEIPLPNVK+SVL+KVIEFC HY EDPMNEIEKPL+SANM +VVQ W+A +V+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    4 ATAEPAAAEAAPTAEET---RTVHLVSQEGDSFDVSVKVAKMSELVKTMLDEELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLKSANMQEVVQNWFATYVQVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A7S3HQT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQT9_9STRA)

HSP 1 Score: 269 bits (687), Expect = 7.190e-90
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 0
Query:   18 ESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            E++DNR++HLVSQEGE FD+ +SV KMS LVKTMIDED  E+ +AQEIPLPNVK+++LSKVIEF  HYKE+PMNEIEKPL+SANM +VVQEWY+ F+ V QE LFELILAANYMDIKPLLDLTCATVASMIKGK+ E+IR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    3 EADDNRTIHLVSQEGECFDVPISVGKMSELVKTMIDEDQNEE-EAQEIPLPNVKSAILSKVIEFTKHYKEEPMNEIEKPLKSANMAEVVQEWYSNFIAVDQEILFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 168          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 268 bits (684), Expect = 3.320e-89
Identity = 139/184 (75.54%), Postives = 158/184 (85.87%), Query Frame = 0
Query:    1 MSALEEKSQAADAPVAEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            M+A EEK+  AD  VAEE ED  +V LVSQEG++F ++  VAKMS LVKTM+ ++ E D + QEIPLPNVK+SVL KVIEFC HYKEDPM EIEKPL+S+ M +VVQEWYA FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAAEEKN-GADPMVAEEEEDEGNVQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGD-EVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSSTMSEVVQEWYATFVDVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A7S2BM50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM50_9STRA)

HSP 1 Score: 262 bits (669), Expect = 6.600e-87
Identity = 131/184 (71.20%), Postives = 158/184 (85.87%), Query Frame = 0
Query:    1 MSALEEKSQAADAPVAEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            M+A + + +  D P A+E +D + V LVSQEG++F ++  VAKMS LVKTMI E+ + + D QEIPLPNVK+ +L KV+EFC HY E+PMNEIEKPL+S+NM++VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIKGKT E+IR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAEQTEDKKIDEPEADE-DDGKMVDLVSQEGDNFQVEKRVAKMSELVKTMIPEEEDGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 183          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A7S3JW81_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3JW81_9STRA)

HSP 1 Score: 265 bits (676), Expect = 7.500e-87
Identity = 133/168 (79.17%), Postives = 152/168 (90.48%), Query Frame = 0
Query:   18 ESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGD-AQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            E +D+R V+L+SQEG+ F+++V+VAKMS LVKTMI E+A+ED D AQEIPLPNVK+ VLSKVIEFC  Y  DPM EIEKPL+SANM++VVQEWYAK+V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   93 EEDDSRRVNLMSQEGDQFEVEVAVAKMSELVKTMIPEEADEDDDQAQEIPLPNVKSHVLSKVIEFCRQYVNDPMAEIEKPLKSANMHEVVQEWYAKYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 260          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: F0XYF9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF9_AURAN)

HSP 1 Score: 255 bits (652), Expect = 1.060e-84
Identity = 124/157 (78.98%), Postives = 144/157 (91.72%), Query Frame = 0
Query:   28 VSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            +SQEG+ F+++V VAKMS LVKTMI E+A+E+ +AQEIPLPNVK+ VL+KVIEFC  Y E+PM+EIEKPL+SANM++VVQEWYA +V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MSQEGDQFEVEVKVAKMSELVKTMIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 157          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.370e-84
Identity = 126/167 (75.45%), Postives = 147/167 (88.02%), Query Frame = 0
Query:   16 AEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCE 182
            A+ +E  + VHLVSQEG+ ++++VSV KMS LVKTM+ +D ++  + QEIPLPNVK +VL+KVIEFC H+KEDPMN+IEKPL+SANM++VVQ+WYA FV V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRRTFNI NDFTPEEEAQVREENKWCE
Sbjct:    5 AKGAESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDD-DDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVNVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKWCE 170          
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Match: A0A7S2DNG6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNG6_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.370e-84
Identity = 128/170 (75.29%), Postives = 148/170 (87.06%), Query Frame = 0
Query:   15 VAEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA 184
            V +  +D + V LVSQEG++F ++  VAKMS LVKTMI ED EE  D QEIPLPNVK+++L KVIEFC H+  +PM+EIEKPL+S+NM++VVQEWYA +VEV QETLFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   44 VEDAEDDGKHVDLVSQEGDNFQVEKKVAKMSELVKTMIPED-EEGEDQQEIPLPNVKSAILGKVIEFCKHHANEPMSEIEKPLKSSNMHEVVQEWYANYVEVDQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 212          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1122.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U6_ECTSI1.900e-11896.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9K0_9STRA3.710e-9476.63Skp1 family, dimerization domain-containing protei... [more]
A0A836CN28_9STRA8.960e-9478.02Skp1 family, dimerization domain-containing protei... [more]
A0A7S3HQT9_9STRA7.190e-9079.04Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SQM9_9STRA3.320e-8975.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BM50_9STRA6.600e-8771.20Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3JW81_9STRA7.500e-8779.17Hypothetical protein n=3 Tax=Pelagomonadales TaxID... [more]
F0XYF9_AURAN1.060e-8478.98Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A4D9D5I6_9STRA1.370e-8475.45Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2DNG6_9STRA3.370e-8475.29Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 22..133
e-value: 2.5E-30
score: 116.7
IPR016072SKP1 component, dimerisationPFAMPF01466Skp1coord: 134..181
e-value: 6.4E-27
score: 93.3
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 24..86
e-value: 4.9E-19
score: 68.3
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 18..184
e-value: 3.5E-63
score: 214.6
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 24..89
IPR016897S-phase kinase-associated protein 1PIRSFPIRSF028729SCF_Skpcoord: 3..184
e-value: 8.2E-60
score: 199.3
IPR016897S-phase kinase-associated protein 1PANTHERPTHR11165SKP1coord: 25..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR11165:SF120S-PHASE KINASE-ASSOCIATED PROTEIN 1coord: 25..183
NoneNo IPR availableCDDcd18322BTB_POZ_SKP1coord: 25..148
e-value: 1.10764E-53
score: 165.073
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 107..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1122contigA-nodosum_M_contig1122:144319..147114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1122.15.1mRNA_A-nodosum_M_contig1122.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1122 144319..148679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1122.15.1 ID=prot_A-nodosum_M_contig1122.15.1|Name=mRNA_A-nodosum_M_contig1122.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=185bp
MSALEEKSQAADAPVAEESEDNRSVHLVSQEGESFDIKVSVAKMSNLVKT
MIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSA
NMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKG
KTAEEIRRTFNIVNDFTPEEEAQVREENKWCEDA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR016072Skp1_comp_dimer
IPR016073Skp1_comp_POZ
IPR011333SKP1/BTB/POZ_sf
IPR016897SKP1
IPR036296SKP1-like_dim_sf