prot_A-nodosum_M_contig1119.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1119.7.1
Unique Nameprot_A-nodosum_M_contig1119.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length256
Homology
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BLAST of mRNA_A-nodosum_M_contig1119.7.1 vs. uniprot
Match: D7G545_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G545_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.450e-30
Identity = 64/130 (49.23%), Postives = 77/130 (59.23%), Query Frame = 0 
Query:  106 MNYVTKKRFFVLTGASLMYHRDHRNLDDPTSSKEILMDGNSRVGLCEMPSPHLGIELVADGKVTQLGARDEPERQEWMDAIASVIRKLEDLKRGYLLKLRAGVPTPSPLHLPTAPLAAAVESGDFKHASE 235
            MNYV+KKRFFVLTG SL+YH DH+NLDDP +SKEI++D NS +     PS    IEL+ADGK                         L+   RGYL+KLRAG PTP+   +  APL AAV SGDF H  +
Sbjct:    1 MNYVSKKRFFVLTGESLLYHHDHKNLDDPLNSKEIILDENSVISFSNEPSLGFAIELIADGK-------------------------LKGSTRGYLMKLRAGTPTPASAPMHQAPLGAAVTSGDFNHVPQ 105
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BLAST of mRNA_A-nodosum_M_contig1119.7.1 vs. uniprot
Match: A0A835ZB29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB29_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.100e-21
Identity = 75/189 (39.68%), Postives = 102/189 (53.97%), Query Frame = 0 
Query:   69 AAYARKVFVASKTGYLMKKSGTELRESNGKGVMKIKLMNYVTKKRFFVLTGASLMYHRDHRNLDDPTSSKEILMDGNSRVG-LCEMPSPHLGIELVADGKVTQLGARDEPERQEWMDAIASVIRKLEDLKRGYLLKLRAGVPTPSPLHLPTAPLAAAVESGDFKHASEMLLEGKGGSGEWTRKYFMLDG 256
            AA   +   A KTGYL+K+        +G G+     M    K++FFVL G SL YH+DH ++DDPTSS+EIL+  +  V    + P+   G  + + GKV QL A+D  ERQEW DAI+ VI ++    RGYLLK  AG    +P      P A ++E        E +L        WTRKYF+L+G
Sbjct:    3 AADDEEKLRALKTGYLVKRPSLR---KHGNGMK----MWSGGKRKFFVLRGGSLTYHKDHHSVDDPTSSREILLTADCDVEYFYDPPTAPFGFCVTSRGKVLQLVAKDVMERQEWKDAISMVINQVRQTTRGYLLKRNAGG---APYVGGGPPPAQSLE--------EDIL--------WTRKYFILNG 165
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BLAST of mRNA_A-nodosum_M_contig1119.7.1 vs. uniprot
Match: A0A836CAA5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.660e-6
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0 
Query:  111 KKRFFVLTGASLMYHRDHRNLDDPTSSKEILMDGNSRVG-LCEMPSPHLGIELVADGKVTQ 170
            K++FFVL G SL YH+DH+++DDP  S+E+L+  +  V    + P    G+ + A GKV Q
Sbjct:    1 KRKFFVLRGGSLSYHKDHKSVDDPAHSREVLLTEDCDVEYFYDPPGAPFGLCVAAPGKVRQ 61
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1119.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G545_ECTSI1.450e-3049.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZB29_9STRA2.100e-2139.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAA5_9STRA1.660e-642.62Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 78..193
e-value: 9.0E-11
score: 51.8
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 80..191
e-value: 3.1E-6
score: 27.6
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 77..191
score: 8.8523
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 72..198
e-value: 1.9E-13
score: 52.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..32
NoneNo IPR availableCDDcd00821PHcoord: 80..186
e-value: 5.25507E-8
score: 47.5374
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 77..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1119contigA-nodosum_M_contig1119:151205..194913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1119.7.1mRNA_A-nodosum_M_contig1119.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1119 151205..195031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1119.7.1 ID=prot_A-nodosum_M_contig1119.7.1|Name=mRNA_A-nodosum_M_contig1119.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=256bp
MDFGPVYKTDDSADRMQGEGNGEDSMGNALGKERPPELVWAAAVAAGESV
SDDLDTAANGIGPKGLTRAAYARKVFVASKTGYLMKKSGTELRESNGKGV
MKIKLMNYVTKKRFFVLTGASLMYHRDHRNLDDPTSSKEILMDGNSRVGL
CEMPSPHLGIELVADGKVTQLGARDEPERQEWMDAIASVIRKLEDLKRGY
LLKLRAGVPTPSPLHLPTAPLAAAVESGDFKHASEMLLEGKGGSGEWTRK
YFMLDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf