prot_A-nodosum_M_contig11159.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11159.2.1
Unique Nameprot_A-nodosum_M_contig11159.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length52
Homology
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BLAST of mRNA_A-nodosum_M_contig11159.2.1 vs. uniprot
Match: D7FYW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW7_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 9.220e-13
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 0 
Query:    1 RDRLLSVLRRHTEAGRSESIAAHRERLRRRPMTEKEVNRCDLAAAKLELKTL 52
            R+RLL V+RR+ +AGR ES+AAHR+RLR+R M+EKEVNRCDLA+AKL LK +
Sbjct:  145 RERLLGVVRRYKDAGRKESVAAHRDRLRKRHMSEKEVNRCDLASAKLGLKAM 196
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11159.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYW7_ECTSI9.220e-1369.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11159contigA-nodosum_M_contig11159:11678..12323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11159.2.1mRNA_A-nodosum_M_contig11159.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11159 11678..12325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11159.2.1 ID=prot_A-nodosum_M_contig11159.2.1|Name=mRNA_A-nodosum_M_contig11159.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=52bp
RDRLLSVLRRHTEAGRSESIAAHRERLRRRPMTEKEVNRCDLAAAKLELK
TL
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