prot_A-nodosum_M_contig1113.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1113.4.1
Unique Nameprot_A-nodosum_M_contig1113.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length594
Homology
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 3.290e-87
Identity = 180/349 (51.58%), Postives = 216/349 (61.89%), Query Frame = 0
Query:    6 GSIDDTDILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLK----DRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSAERRPSAVAGTAGGVEELGELDGDASRKGFSKGRSVGSGNDEGRTSSPTSVADFPSAEGGGGDGDGTRRATPGGRFNGRTRTKGGRLKWHKRGGPRGQARTPSGSIAGVGGCSVGSGKGVEEEPSEGQGHGRGDAETLAELMSAQALFRGSIPGLTSFDRSDINSFHREKEVLLSAAKAAGDIQKRVLIEETTPDVLNAKGLLMFLKTSPSAHPP 350
            G ID +DIL+ALD KRKRCVRKW+ +ED EM+ +V+  G K WGLIGS+L     DRTGKQCRERWHNQLDPAIKK+PWT+ EE+TLMRAHSIHGNKWAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNM+ +S   R  +V+ + G  +E           G S+G +  +           +V      E GG D         GGR  GR R                                     G     + G G G   A T A++MSAQALF  SIPGLTSFDR++++SF +EK  LLSAA+A GD +KR ++EETTPDVLNAKGLLMFL+ SPS+  P
Sbjct:    4 GDIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVNSVLDRRQSVSSSGGDEDEPHPATRPRGISGGSRGPTAAAAGGXXXXXVGMTV------ETGGDD--------SGGRNQGRCR-------------------------------------GYSRRDAAGTGEG---ARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETP 298          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA)

HSP 1 Score: 189 bits (479), Expect = 5.500e-53
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0
Query:   22 KRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMT 132
            KR VRKW+PEEDQ M  +V  HGT+ WGLIGS L  RTGKQCRERWHNQLDP IKK+ WTR EEE LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNM+
Sbjct:   28 KRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSRQLNMS 138          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.890e-51
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 0
Query:   22 KRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLS 126
            KR VRKW+PEEDQ M+ +V  HGT+ WGLIGS L  RTGKQCRERWHNQLDP IKK+ WTR EEE LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLS
Sbjct:    3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 8.040e-49
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0
Query:   20 KRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQL 129
            K +R VRKWTPEED  M+ +V  HGTK WG IGS L+ RTGKQCRERWHNQLDPAI+K+PWT  EEE L++AHS++GN+WAEIAK+LPGRTDNA+KNHWNSAKRRLSRQ+
Sbjct:   43 KPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQGRTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSRQV 152          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.530e-44
Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 0
Query:   21 RKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQ 128
            +KR VRKWT EED  M+ +V  HGT+ WGLIG+KL  RTGKQCRERWHNQLDPAI K PWT HEE  L+ AH+  GN+WAEIAK LPGRTDNAIKNHWNSAKRRL RQ
Sbjct:   14 QKRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNGRTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLRQ 121          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A8K1FIZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIZ4_PYTOL)

HSP 1 Score: 164 bits (414), Expect = 5.900e-42
Identity = 78/128 (60.94%), Postives = 97/128 (75.78%), Query Frame = 0
Query:    1 MSRRKGSIDDTD-ILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSR 127
            M+ R+  +DD D    +   K ++ V KWT +EDQ MI +V ++GT+ W +IG+KL  R GKQCRERWHNQLDPAI+K+PWT  EE  L  +H ++GNKWAEIAKMLPGRTDNAIKNHWNS+KRRL R
Sbjct:    7 MAERRRLLDDEDHYRGSKKRKERKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKDPWTDEEERILRESHELYGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 134          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A6G0XQ76_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ76_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.380e-42
Identity = 73/108 (67.59%), Postives = 87/108 (80.56%), Query Frame = 0
Query:   22 KRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQL 129
            ++CV+KWTPEED  M+++V  HGT+ W LIGS L+ R GKQCRERWHNQLDP I+K+PWT  EE  L  AH+ +GNKWAEIAK+LPGRTDNAIKNHWNS KRR  R +
Sbjct:   13 RKCVQKWTPEEDALMLELVQTHGTRRWSLIGSMLQGRNGKQCRERWHNQLDPNIRKDPWTPEEEMLLKVAHNKYGNKWAEIAKLLPGRTDNAIKNHWNSYKRRGHRAM 120          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A7R9U0E6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0E6_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.650e-41
Identity = 77/110 (70.00%), Postives = 94/110 (85.45%), Query Frame = 0
Query:   20 KRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQL 129
            ++KR VRKWTPEED+ M+D+V   GTK WGLIG +L+ RTGKQCRERWHNQLDP+I+K+PW++ EE  L+  H   GN+WAEIAK+LPGRTDNAIKNHWNSAKRRL+RQ+
Sbjct:   18 RKKRQVRKWTPEEDKLMMDLVNTFGTKRWGLIGGRLQGRTGKQCRERWHNQLDPSIRKDPWSKQEEAILIVVHQQVGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLTRQM 127          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: D0MS64_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS64_PHYIT)

HSP 1 Score: 160 bits (404), Expect = 9.260e-41
Identity = 79/143 (55.24%), Postives = 98/143 (68.53%), Query Frame = 0
Query:   14 LDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSAERRPSAVAGTAGGVEELGEL 156
            LD    K ++ V KWT +ED  M+ +V ++GT+ W +IG+KL  R GKQCRERWHNQLDPAI+KEPWT  EE  L   H   GNKWAEIAKMLPGRTDNAIKNHWNS+KRRL R    T++S  +R  +    +    E+ E+
Sbjct:   21 LDPPTRKERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGFTPTSTSQRKRRDSSGSDSSSSREISEI 163          
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Match: A0A485LUK2_9STRA (Aste57867_25154 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUK2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.830e-40
Identity = 78/127 (61.42%), Postives = 89/127 (70.08%), Query Frame = 0
Query:   10 DTDILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSA 136
            D D  D    +RK  + KWT  ED +M+++V  HGT+ W LIGS L  R GKQCRERWHNQLDPAI+K+PWT  EE  L  AH   GNKWAEIAK+LPGRTDNAIKNHWNS KRR  R L   A +A
Sbjct:    6 DKDSADEASCERK-SINKWTAAEDAKMVELVQAHGTRRWSLIGSLLPGRNGKQCRERWHNQLDPAIRKDPWTADEETMLKIAHHKFGNKWAEIAKLLPGRTDNAIKNHWNSYKRRGHRALQHKAKAA 131          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1113.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE3.290e-8751.58MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YSF8_9STRA5.500e-5379.28Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YW24_9STRA4.890e-5179.05Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2CJK5_9STRA8.040e-4974.55Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0SQE8_9STRA2.530e-4474.07Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8K1FIZ4_PYTOL5.900e-4260.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XQ76_9STRA6.380e-4267.59Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7R9U0E6_9STRA1.650e-4170.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D0MS64_PHYIT9.260e-4155.24Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
A0A485LUK2_9STRA3.830e-4061.42Aste57867_25154 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 24..73
e-value: 6.3E-11
score: 52.3
coord: 76..124
e-value: 2.9E-16
score: 70.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 27..71
score: 10.928677
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 72..122
score: 10.382894
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 27..69
e-value: 1.06818E-12
score: 60.667
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 79..119
e-value: 2.97095E-13
score: 62.2078
NoneNo IPR availableGENE3D1.10.10.60coord: 78..143
e-value: 2.0E-19
score: 71.4
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 28..88
e-value: 3.9E-15
score: 55.9
NoneNo IPR availableGENE3D1.10.10.60coord: 26..76
e-value: 5.5E-19
score: 69.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..594
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 21..137
IPR028311Myb-related protein BPANTHERPTHR45614:SF30MYB-RELATED PROTEIN Bcoord: 21..137
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 26..71
score: 16.568027
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 72..126
score: 25.634645
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 24..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1113contigA-nodosum_M_contig1113:114638..129086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1113.4.1mRNA_A-nodosum_M_contig1113.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1113 114355..129086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1113.4.1 ID=prot_A-nodosum_M_contig1113.4.1|Name=mRNA_A-nodosum_M_contig1113.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=594bp
MSRRKGSIDDTDILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGL
IGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWA
EIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSAERRPSAVAGTAGGV
EELGELDGDASRKGFSKGRSVGSGNDEGRTSSPTSVADFPSAEGGGGDGD
GTRRATPGGRFNGRTRTKGGRLKWHKRGGPRGQARTPSGSIAGVGGCSVG
SGKGVEEEPSEGQGHGRGDAETLAELMSAQALFRGSIPGLTSFDRSDINS
FHREKEVLLSAAKAAGDIQKRVLIEETTPDVLNAKGLLMFLKTSPSAHPP
PAIEADVDAYADRSSSAGSSSDEDEDAPRGGKGCGNSLSVAEQGGDEKAR
DGADALGSPPPPEITARCPSVLDDAGPERSDQSPARSTARTRYPVTVSIA
LPATPWSLVESSGSKVPALTPKVLGTDPATPAAMSPSMPPCDEALCIREP
RVISALMDPGTPSVGRLPDEGRLDNDCQAPSVGRHDGVTRSQEEAAEQAV
AAAAATIAGMASVGGERSKRRRGFGNAMAECKGEKWGSGRGGME
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR028311MYBL2
IPR017930Myb_dom
IPR009057Homeobox-like_sf