prot_A-nodosum_M_contig1113.10.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1113.10.2
Unique Nameprot_A-nodosum_M_contig1113.10.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length185
Homology
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: D8LCV8_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV8_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 3.080e-109
Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 0
Query:    1 MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            MSDYATELLRRQLQ ELNKNPPEGVSVGLA+DDNMF+WELLIVGP DTLYEGGFFKA+LEFPKDFPNNPPTMTF+SEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSV+SMLSDPNDESPANIDAAVMWRNDR+ FKKKSRLL+R
Sbjct:    1 MSDYATELLRRQLQ-ELNKNPPEGVSVGLANDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFISEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVR 161          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A836CP86_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP86_9STRA)

HSP 1 Score: 278 bits (710), Expect = 2.180e-93
Identity = 132/162 (81.48%), Postives = 146/162 (90.12%), Query Frame = 0
Query:    1 MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            M+DYATELLRRQL  ELN+NPPEGVSVGL DD N++ WELLIVGPPDTLYE G FKA LEFPKDFPN+PPTMTF S+M+HPNVY DGRVCISILHPPGED+FN+QETAEERWRPILGVE II+SVISMLSDPNDESPANIDAAV WR++RD FKK+ R  +R
Sbjct:    1 MTDYATELLRRQLN-ELNRNPPEGVSVGLVDDSNIYQWELLIVGPPDTLYEEGLFKATLEFPKDFPNSPPTMTFTSDMWHPNVYEDGRVCISILHPPGEDRFNDQETAEERWRPILGVESIIMSVISMLSDPNDESPANIDAAVQWRSERDAFKKRVRKCVR 161          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A4D9D8W7_9STRA (UBC core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W7_9STRA)

HSP 1 Score: 271 bits (693), Expect = 8.190e-91
Identity = 132/162 (81.48%), Postives = 145/162 (89.51%), Query Frame = 0
Query:    1 MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            M+DYATELL+RQL  ELNKNPPEGVSVGL DD ++F WELL+VGP DTLYEGGFFKARL FP DFPN PPTMTF +EM+HPNVY DGRVCISILHPPGED+FN QE+A+ERWRPILGVE IIVSVISMLSDPNDESPANIDAAV WRNDR GFKK+ R ++R
Sbjct:    1 MTDYATELLKRQLH-ELNKNPPEGVSVGLVDD-SVFEWELLLVGPADTLYEGGFFKARLTFPSDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNSQESADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQWRNDRAGFKKRVRAVVR 160          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A067CW50_SAPPC (UBC core domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CW50_SAPPC)

HSP 1 Score: 266 bits (681), Expect = 5.510e-89
Identity = 123/160 (76.88%), Postives = 143/160 (89.38%), Query Frame = 0
Query:    3 DYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            DY  ELLRRQL  EL++NPPEGVSVGL DD+N+F WE+++VGPPDTLYEGGFF+ARLEFPKDFPN PP MTF+S+M+HPNVYP G VCISILHPPGED+ N QE+A+ERWRPILGVE I+VSVISMLSDPND+SPANIDAAV WRND+D FKK+ R ++R
Sbjct:    2 DYGRELLRRQL-TELSRNPPEGVSVGLGDDENIFHWEIMLVGPPDTLYEGGFFRARLEFPKDFPNMPPKMTFISDMWHPNVYPSGVVCISILHPPGEDQMNAQESADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRNDKDAFKKRCRRIVR 160          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A8K1CH94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH94_PYTOL)

HSP 1 Score: 263 bits (671), Expect = 1.970e-87
Identity = 122/161 (75.78%), Postives = 142/161 (88.20%), Query Frame = 0
Query:    2 SDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            +DYA ELL+RQ   E++KNPPEGVSVGL DD+N+F WE+L++GPPDTLYEGGFFKA LEFP +FPN PP MTF SEM+HPNVYP+G VCISILHPPGED+ N+ ETA+ERWRPILGVE I+VSVISMLSDPND+SPANIDAAV WRND+DGFKK  R ++R
Sbjct:    3 TDYARELLKRQF-IEMSKNPPEGVSVGLGDDENIFRWEILLIGPPDTLYEGGFFKAVLEFPPNFPNMPPKMTFTSEMWHPNVYPNGIVCISILHPPGEDQLNQHETADERWRPILGVEAILVSVISMLSDPNDDSPANIDAAVEWRNDKDGFKKHCRRIVR 162          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A7S0XFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFZ8_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.560e-86
Identity = 123/162 (75.93%), Postives = 141/162 (87.04%), Query Frame = 0
Query:    1 MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            MS Y  ELLRRQL  +L++NPP+GVSVGL +DDN+F WE++IVGPPDTLYEGG FKA L+FP+DFPNNPP M F S M+HPNV+ DG+VCISILHPPG D FNEQETAEERWRPILGVE II+SVISMLSDPND SPANIDAAVMWRND++ FKKK R ++R
Sbjct:    7 MSTYGGELLRRQL-IDLSRNPPDGVSVGLREDDNIFHWEVMIVGPPDTLYEGGLFKATLDFPEDFPNNPPVMAFTSAMWHPNVFADGKVCISILHPPGVDHFNEQETAEERWRPILGVESIILSVISMLSDPNDSSPANIDAAVMWRNDKNNFKKKVRDIVR 167          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A1Z5JLS8_FISSO (Ubiquitin-conjugating enzyme E2 G1 n=7 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5JLS8_FISSO)

HSP 1 Score: 260 bits (664), Expect = 2.210e-86
Identity = 126/162 (77.78%), Postives = 141/162 (87.04%), Query Frame = 0
Query:    1 MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            MSDY TELLRRQL  +L KNP + VSVGL DD N++ WE+LI+GP  TLYEGGFFKA+L FP DFPN PPTMTF SEM+HPNVY DGRVCISILHPPGED+FN+QE+AEERWRPILGVE I+VSVISMLSDPNDESPAN+DAAVMWRNDR  FKKK R ++R
Sbjct:    1 MSDYGTELLRRQL-TDLAKNPIDLVSVGLVDDSNVYEWEILIMGPDGTLYEGGFFKAKLVFPPDFPNMPPTMTFTSEMWHPNVYTDGRVCISILHPPGEDEFNQQESAEERWRPILGVEQILVSVISMLSDPNDESPANLDAAVMWRNDRAAFKKKVRQVVR 161          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A024UPR9_9STRA (UBC core domain-containing protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UPR9_9STRA)

HSP 1 Score: 259 bits (663), Expect = 3.040e-86
Identity = 121/160 (75.62%), Postives = 140/160 (87.50%), Query Frame = 0
Query:    3 DYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            DY  ELLRRQ   EL++NPPEGVSVGL DD+N+F WE+++VGPPDTLYEG FFKARLEFPKDFPN PP MTFVSEM+HPNVYP+G VCISILHPPGED+ N QE+A+ERWRPILGVE I+VSVISMLSDPND+SPANIDAAV WR +++ FKK  R ++R
Sbjct:    2 DYGRELLRRQF-TELSRNPPEGVSVGLGDDENLFNWEIMLVGPPDTLYEGAFFKARLEFPKDFPNMPPKMTFVSEMWHPNVYPNGVVCISILHPPGEDRMNAQESADERWRPILGVEAILVSVISMLSDPNDDSPANIDAAVEWRTNKEAFKKHCRRIVR 160          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A7S2AVY1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVY1_9STRA)

HSP 1 Score: 255 bits (651), Expect = 2.960e-84
Identity = 121/159 (76.10%), Postives = 137/159 (86.16%), Query Frame = 0
Query:    4 YATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            Y  ELLRRQL A+LN+NPP+GVSVGL DDDN+ +WE++++GP +T+YEGGFFKA LEFP DFPN PP M FVSEM+HPNVY DGRVCISILHPPGEDK+N QETAEERWRPILGVE II+SV+SML DPNDESPANIDAAVM R DR  FKKK R  +R
Sbjct:   14 YCIELLRRQL-ADLNRNPPDGVSVGLVDDDNIMIWEIMLIGPSETMYEGGFFKATLEFPPDFPNMPPEMRFVSEMWHPNVYADGRVCISILHPPGEDKYNAQETAEERWRPILGVEQIILSVMSMLGDPNDESPANIDAAVMLREDRPAFKKKVRQCVR 171          
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Match: A0A448Z7I4_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A448Z7I4_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.670e-83
Identity = 122/162 (75.31%), Postives = 138/162 (85.19%), Query Frame = 0
Query:    1 MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLYEGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDRDGFKKKSRLLLR 162
            M+DY TELLRRQL A+L KNP + VSVGLADD N++ WE+LI+GP  TL+EGGFFKARL FP DFPN PPTMTF+SEM+HPNVY DG+VCISILHPPGED  N QE A ERWRPILGVE I++SVISMLSDPNDESPAN+DAAV WRNDR  FKKK R ++R
Sbjct:    1 MTDYGTELLRRQL-ADLCKNPIDLVSVGLADDSNLYEWEILIMGPDGTLFEGGFFKARLTFPADFPNMPPTMTFISEMWHPNVYEDGKVCISILHPPGEDAMNSQELAIERWRPILGVEQILISVISMLSDPNDESPANLDAAVQWRNDRPAFKKKVRQIVR 161          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1113.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV8_ECTSI3.080e-10993.83UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CP86_9STRA2.180e-9381.48Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A4D9D8W7_9STRA8.190e-9181.48UBC core domain-containing protein n=1 Tax=Nannoch... [more]
A0A067CW50_SAPPC5.510e-8976.88UBC core domain-containing protein n=3 Tax=Saprole... [more]
A0A8K1CH94_PYTOL1.970e-8775.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0XFZ8_9STRA1.560e-8675.93Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1Z5JLS8_FISSO2.210e-8677.78Ubiquitin-conjugating enzyme E2 G1 n=7 Tax=Bacilla... [more]
A0A024UPR9_9STRA3.040e-8675.63UBC core domain-containing protein n=7 Tax=Saprole... [more]
A0A7S2AVY1_9STRA2.960e-8476.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A448Z7I4_9STRA1.670e-8375.31UBC core domain-containing protein n=2 Tax=Bacilla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..166
e-value: 2.8E-58
score: 209.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..184
NoneNo IPR availablePANTHERPTHR24067:SF318SUBFAMILY NOT NAMEDcoord: 7..164
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 7..164
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 9..158
e-value: 2.7E-47
score: 160.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..166
score: 47.265095
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 8..159
e-value: 7.33067E-60
score: 181.246
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..172
e-value: 6.2E-57
score: 194.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 15..162
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 79..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1113contigA-nodosum_M_contig1113:174681..191457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1113.10.2mRNA_A-nodosum_M_contig1113.10.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1113 174680..191457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1113.10.2 ID=prot_A-nodosum_M_contig1113.10.2|Name=mRNA_A-nodosum_M_contig1113.10.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=185bp
MSDYATELLRRQLQAELNKNPPEGVSVGLADDDNMFLWELLIVGPPDTLY
EGGFFKARLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGED
KFNEQETAEERWRPILGVEGIIVSVISMLSDPNDESPANIDAAVMWRNDR
DGFKKKSRLLLRDTPRKTRRAKNGSSRASLGPQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS