prot_A-nodosum_M_contig111.50.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig111.50.1
Unique Nameprot_A-nodosum_M_contig111.50.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length407
Homology
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BLAST of mRNA_A-nodosum_M_contig111.50.1 vs. uniprot
Match: D7FVI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI4_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.410e-9
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 0 
Query:   34 PGDTAQSVKINPLVDNEDVLRHAMPFVG-SEGYLYVGGVSTRWRDAW--GDLPRETSLKAAVQSVPRLSLAKDN----GCR-------------WDDITFMHVAETGNLDVVRYAR 129
            P     +++ NPL+D +D+LRH +PFV  +EGYL+V GV++ W  AW  G LP+ T L   V+S  RL+ A       G               WD+      A  G+L  ++YAR
Sbjct:   23 PASAQDTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLGTGGXXXXXXXXXASTPWVWDESVCRRAAAGGHLGALKYAR 138
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BLAST of mRNA_A-nodosum_M_contig111.50.1 vs. uniprot
Match: A0A6H5JXW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW6_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.420e-9
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 0 
Query:   44 NPLVDNEDVLRHAMPFVG-SEGYLYVGGVSTRWRDAW--GDLPRETSLKAAVQSVPRLSLAKDN---------GCR----WDDITFMHVAETGNLDVVRYAR 129
            NPL+D +D+LRH +PFV  +EGYL+V GV++ W  AW  G LP+ T L   V+S  RL+ A            G      WD+      A  G+L  ++YAR
Sbjct:   35 NPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYRAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGSTSGGASTPWVWDESVCRRAAAGGHLGALKYAR 136
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig111.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVI4_ECTSI1.410e-935.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXW6_9PHAE1.420e-939.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 95..405
e-value: 6.2E-26
score: 92.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 109..395
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 116..298
coord: 243..403

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig111contigA-nodosum_M_contig111:892221..893441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig111.50.1mRNA_A-nodosum_M_contig111.50.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig111 892156..894002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig111.50.1 ID=prot_A-nodosum_M_contig111.50.1|Name=mRNA_A-nodosum_M_contig111.50.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=407bp
MAMKRSNLDDPRTIPSENNKVFRLPVPEVSSVVPGDTAQSVKINPLVDNE
DVLRHAMPFVGSEGYLYVGGVSTRWRDAWGDLPRETSLKAAVQSVPRLSL
AKDNGCRWDDITFMHVAETGNLDVVRYARAQGCHWDDKACASASVGGHLA
VLKWLRSNGCPWGSHICASAAIGGHLELLQWCRAQGCPWDSTTVEYAAWG
GHLDVCKWARANGCPRDSLACMWAASCGHLDVLKWLKDDGCPWDDGTALA
IAAAGQWEILKWARANGCPWNEATCAQAASSGNLEVLKWCRANGCPWNER
TPSCAARGGFLDILKWCREEGCPWDERVCASAASSGRLDILRWCRENGCP
WNEFTCSSAAAGGHMSILEWCRANGCPWDERTCQKAAAGGHDAVLEWCRA
NGCPET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf