prot_A-nodosum_M_contig111.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig111.16.1
Unique Nameprot_A-nodosum_M_contig111.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length456
Homology
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: D7FLR0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR0_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.450e-12
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:  123 SNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKLG 182
            SNPW WAGVE   G+V GL+L  NQLQG+LPG AL +++ LVTL+LS NEI G +P +LG
Sbjct:    8 SNPWCWAGVECGVGDVQGLRLSDNQLQGVLPGAALTNMRGLVTLDLSGNEIGGTLPPELG 67          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: A0A3F2RJP5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJP5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.050e-10
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   81 PELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKLG 182
            P   + AL   ++A+ G RW    GW  ++PT           +P  W GVE   G V+ L+LP N+L G LP ++LA L  L  L+LS N++ G IP +LG
Sbjct:  237 PSTEVAALVEIYDALGGDRWRRRDGW--KQPT----------QDPEQWFGVEVTMGHVVALELPANELSGCLPAESLARLPQLRVLDLSKNQLRGEIPAELG 326          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: W2H4N1_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2H4N1_PHYPR)

HSP 1 Score: 71.6 bits (174), Expect = 7.150e-10
Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 0
Query:   81 PELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKLG 182
            P   + AL   ++A++G RW    GW  ++PT           +P  W GVE   G V+ L+LP NQL G LP  +L  L  L  L+LS N++ G IP +LG
Sbjct:    9 PTTEVAALVELYDALNGDRWRRRDGW--KQPTR----------DPEQWFGVEVVMGHVVALELPANQLSGCLPAASLTRLPQLRVLDLSKNQLRGEIPAELG 98          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: A0A8J5IL00_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IL00_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.410e-10
Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 0
Query:   81 PELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKLG 182
            P   + AL   ++A++G RW    GW  ++PT           +P  W GVE A G V+ L++P N+L G LP  +LA L  L  L+LS N++ G IP +LG
Sbjct:    9 PTTEVTALVELYDALNGDRWRRRDGW--KQPTR----------DPEQWFGVEVAMGHVVALEVPANELSGCLPAASLARLPQLRVLDLSKNQLRGEIPAELG 98          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: H3GFP3_PHYRM (Crinkler domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFP3_PHYRM)

HSP 1 Score: 72.4 bits (176), Expect = 8.320e-10
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   81 PELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKLG 182
            P   + AL   ++A+ G RW    GW  ++PT           +P  W GVE A G V+ L+LP N+L G LP  +LA L  L  L+LS N++ G +P +LG
Sbjct:    9 PTTEVAALVELYDALGGDRWRRRDGW--KQPTR----------DPEQWFGVEVAMGHVVALELPANELSGCLPAASLAQLPQLRVLDLSKNQLRGELPAELG 98          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: D0NG45_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NG45_PHYIT)

HSP 1 Score: 70.1 bits (170), Expect = 1.420e-9
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   81 PELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKLG 182
            P   + AL   ++A++G RW    GW  ++PT           +P  W GV+   G V+ L+LP N+L G LP  +LA L  L  L+LS N++ G IP +LG
Sbjct:    9 PTTEVTALVDLYDALNGDRWRRRDGW--KQPTR----------DPEHWYGVKVVMGHVVALELPANELSGCLPAASLAQLPQLRVLDLSKNQLRGEIPAELG 98          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: G4YS16_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YS16_PHYSP)

HSP 1 Score: 70.1 bits (170), Expect = 2.350e-9
Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 0
Query:   71 GKKFVPPQRPPELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKL 181
            G+  +PP       + AL   ++A+ G RW    GW  ++PT           +P  W GVE A G V+ L+LP N+L G LP  +LA L  L  L+LS N++ G IP +L
Sbjct:    4 GQSSIPPT-----EVAALVELYDALGGDRWRRRDGW--KQPTR----------DPEQWFGVEVAMGHVVALELPANELSGCLPAASLARLPQLRVLDLSKNQLRGEIPAEL 97          
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Match: M4BDR7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDR7_HYAAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.060e-8
Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0
Query:   81 PELNMRALQRFFEAMHGARWLNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQGILPGDALADLKDLVTLNLSNNEIEGNIPTKL 181
            P     AL+  ++A++G RW    GW            +  + +P  W GVE   G V+ L+LP N L G LP   LA L  L  L+LS N+++G IP +L
Sbjct:    9 PTTEQTALEALYDALNGDRWRRRDGW------------KQATYDPEQWFGVEVVAGHVVALELPANDLSGCLPVATLARLPHLRVLDLSKNQLQGEIPVEL 97          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig111.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FLR0_ECTSI1.450e-1261.67Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A3F2RJP5_9STRA4.050e-1038.24Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
W2H4N1_PHYPR7.150e-1038.24Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A8J5IL00_9STRA7.410e-1038.24Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
H3GFP3_PHYRM8.320e-1038.24Crinkler domain-containing protein n=1 Tax=Phytoph... [more]
D0NG45_PHYIT1.420e-937.25Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
G4YS16_PHYSP2.350e-936.94Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
M4BDR7_HYAAE3.060e-835.64Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 103..248
e-value: 6.3E-35
score: 122.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 351..423
e-value: 4.3E-11
score: 44.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 249..348
e-value: 1.9E-25
score: 91.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 210..269
e-value: 7.1E-9
score: 35.3
coord: 141..196
e-value: 2.8E-6
score: 27.0
NoneNo IPR availablePANTHERPTHR48052:SF5MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKEcoord: 205..417
coord: 141..288
NoneNo IPR availablePANTHERPTHR48052UNNAMED PRODUCTcoord: 205..417
coord: 141..288
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 138..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig111contigA-nodosum_M_contig111:345855..357754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig111.16.1mRNA_A-nodosum_M_contig111.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig111 345648..357754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig111.16.1 ID=prot_A-nodosum_M_contig111.16.1|Name=mRNA_A-nodosum_M_contig111.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=456bp
MSATLLRTCSFNSRDIKFELETALVALEASAKAARRTSGPKASLSPAAKR
RRHELHREVTALKGLYSRATGKKFVPPQRPPELNMRALQRFFEAMHGARW
LNLAGWLGRRPTAINRGVQPFSSNPWSWAGVEYAEGEVIGLQLPGNQLQG
ILPGDALADLKDLVTLNLSNNEIEGNIPTKLGDLPKLQYLCLSVTKLKGQ
IPDALGALKGLRELDVSCGALSGLIPTPLGCCSKLSILNLSHNDLEGVIP
AELGELRGLKELGLAHNRLVGPIPVSLGGLVCLQSLSLCASRAERPLSPW
LSELTCLRSLLLDHNHFSGGLPEAISNLRHLQVIHLQFNQLCGRIPRSIG
MLLELRVLNFSRNNMEGKLPAEIGNLTKLAGLELGDNDIVGPLPVELGRL
TRLVDFHVIDGCLSYSMPVRRGFTRHAFERVFVAGPALGLNNTTFPSGKK
SERSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt