prot_A-nodosum_M_contig1101.3.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1101.3.2
Unique Nameprot_A-nodosum_M_contig1101.3.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length160
Homology
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A0P0YV27_9STRA (Host cell division cycle protein n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV27_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.780e-30
Identity = 62/85 (72.94%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    2 SGESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            SG SE+ VNQ+LTEMDGLE+RR+VFV+AAT RPELI PAM+RPGRLD+LLYVPLP+P DRV IL+A+S  V+L PDVD++T+GRS
Sbjct:  232 SGVSERVVNQLLTEMDGLESRRSVFVIAATNRPELIDPAMMRPGRLDKLLYVPLPTPNDRVSILKAISGKVNLGPDVDLDTIGRS 316          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A7S2E712_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E712_TRICV)

HSP 1 Score: 114 bits (284), Expect = 1.320e-29
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            G SE+ VNQ+LTEMDGL++RR+VFVVAAT RPELI PAM+RPGRLD+LLYVPLP+ +DRV ILRAL+  V L  DVD++ +GRS
Sbjct:   11 GVSERVVNQLLTEMDGLDSRRSVFVVAATNRPELIDPAMMRPGRLDKLLYVPLPTASDRVSILRALAVKVRLGDDVDLDAIGRS 94          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: D7FQZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ0_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 3.900e-29
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRSRK 87
            G +E+ VNQ+LTEMDGLEAR+NVFVVAAT RPELI  AMLRPGRLDRLLYVPLPS +DRV IL+ALSATVSL PDVD+  VG + K
Sbjct:  776 GVTERVVNQLLTEMDGLEARKNVFVVAATNRPELIDQAMLRPGRLDRLLYVPLPSASDRVSILKALSATVSLGPDVDLHAVGHNPK 861          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A7S1GP83_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GP83_CYCTE)

HSP 1 Score: 114 bits (284), Expect = 1.570e-28
Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            G SE+ VNQ+LTEMDGLE+RR V V+AAT RPELI PAMLRPGRLD+LLYVPLPS  DRV ILRALS+ V+L   VD+E +G+S
Sbjct:   26 GVSERVVNQLLTEMDGLESRRTVLVIAATNRPELIDPAMLRPGRLDKLLYVPLPSSGDRVSILRALSSNVTLAESVDLEEIGKS 109          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A7S3DW80_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DW80_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.170e-28
Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            G SE+ VNQ+LTEMDGL++RR+VFV+AAT RPELI PAM+RPGRLD+LLYVPLP+P DR+ IL ALSA++ +  DVDM+ +G S
Sbjct:  104 GVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMMRPGRLDKLLYVPLPTPEDRISILTALSASIKIGEDVDMQKIGAS 187          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A8J9SKC3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SKC3_PHATR)

HSP 1 Score: 112 bits (281), Expect = 2.990e-27
Identity = 57/84 (67.86%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            G +E+ VNQ+LTEMDGLE+RR+VFV+AAT RPELI PAM+RPGRLD+LL+VPLP P DRV IL+AL   ++L  DVDM+ +GRS
Sbjct:  153 GVTERVVNQLLTEMDGLESRRSVFVIAATNRPELIDPAMMRPGRLDKLLFVPLPGPEDRVLILKALCTGINLAADVDMDHIGRS 236          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: B8CDA1_THAPS (Nuclear vcp-like-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDA1_THAPS)

HSP 1 Score: 115 bits (288), Expect = 5.950e-27
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVG 83
            G SE+ VNQ+LTEMDGL++RR+VFV+AAT RPELI PAMLRPGRLD+LLYVPLPSP DR+ ILRALS  + L PDVD+  + 
Sbjct:  440 GVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPSPTDRLSILRALSTKIKLAPDVDLHAIA 521          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A1E7FWB3_9STRA (AAA-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWB3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.230e-27
Identity = 58/84 (69.05%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            G SE+ VNQ+LTEMDGLE+RR+VFV+ AT RPELI PAM+RPGRLD+LLYVPLP P DRV IL+ALS ++SL P+VD+  +G S
Sbjct:  400 GVSERVVNQLLTEMDGLESRRSVFVIGATNRPELIDPAMMRPGRLDKLLYVPLPEPNDRVSILKALSCSMSLSPEVDLHKIGTS 483          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A1Z5JI63_FISSO (Ribosome biogenesis ATPase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI63_FISSO)

HSP 1 Score: 115 bits (288), Expect = 7.360e-27
Identity = 58/84 (69.05%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRS 85
            G SE+ VNQ+LTEMDGL+ RR+VF++AAT RPELI PAMLRPGRLD+LLYVPLP+P DRV IL+ALS+ ++L  DVD E +G S
Sbjct:  635 GVSERVVNQLLTEMDGLDGRRSVFIIAATNRPELIDPAMLRPGRLDKLLYVPLPTPEDRVSILKALSSNIALADDVDFEVIGMS 718          
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Match: A0A448ZD86_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD86_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.730e-26
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    3 GESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRLLYVPLPSPADRV-ILRALSATVSLEPDVDMETVGRSRK 87
            G SE+ VNQ+LTEMDGLE+RR+VFV+AAT RPELI PAM+RPGRLD+LLYV LP P DRV IL+A+S+ +   PDVD+  +G S K
Sbjct:  633 GVSERVVNQLLTEMDGLESRRSVFVIAATNRPELIDPAMMRPGRLDKLLYVALPEPEDRVSILKAISSNIKFSPDVDLHKIGTSPK 718          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1101.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P0YV27_9STRA2.780e-3072.94Host cell division cycle protein n=1 Tax=Nitzschia... [more]
A0A7S2E712_TRICV1.320e-2970.24Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
D7FQZ0_ECTSI3.900e-2976.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1GP83_CYCTE1.570e-2871.43Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3DW80_9STRA8.170e-2867.86Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A8J9SKC3_PHATR2.990e-2767.86Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B8CDA1_THAPS5.950e-2770.73Nuclear vcp-like-like protein (Fragment) n=1 Tax=T... [more]
A0A1E7FWB3_9STRA7.230e-2769.05AAA-domain-containing protein (Fragment) n=1 Tax=F... [more]
A0A1Z5JI63_FISSO7.360e-2769.05Ribosome biogenesis ATPase n=2 Tax=Fistulifera sol... [more]
A0A448ZD86_9STRA4.730e-2666.28Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..55
e-value: 3.2E-21
score: 77.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..64
NoneNo IPR availableGENE3D1.10.8.60coord: 56..84
e-value: 3.2E-21
score: 77.8
NoneNo IPR availablePANTHERPTHR23077AAA-FAMILY ATPASEcoord: 9..83
NoneNo IPR availableCDDcd00009AAAcoord: 3..55
e-value: 4.18597E-4
score: 36.7403
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 3..54
e-value: 7.2E-9
score: 36.2
IPR025653Peroxisome biogenesis factor 1PANTHERPTHR23077:SF12PEROXISOME BIOGENESIS FACTOR 1coord: 9..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1101contigA-nodosum_M_contig1101:47625..52291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1101.3.2mRNA_A-nodosum_M_contig1101.3.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1101 21918..53720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1101.3.2 ID=prot_A-nodosum_M_contig1101.3.2|Name=mRNA_A-nodosum_M_contig1101.3.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=160bp
MSGESEQKVNQVLTEMDGLEARRNVFVVAATKRPELIGPAMLRPGRLDRL
LYVPLPSPADRVILRALSATVSLEPDVDMETVGRSRKIRRRVSAEPIWRR
YCERRGWMCCDDSRTTRPWKVGGVPLGGGACLFILLVITFTRLGINRFWI
PICAYPTCY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR025653Pex1