prot_A-nodosum_M_contig11.97.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.97.2
Unique Nameprot_A-nodosum_M_contig11.97.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length535
Homology
BLAST of mRNA_A-nodosum_M_contig11.97.2 vs. uniprot
Match: D7G4U3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U3_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 9.990e-29
Identity = 69/210 (32.86%), Postives = 104/210 (49.52%), Query Frame = 0
Query:    1 MGVIASNSKNGAIASEIRSWPNFQERTCLTSSDLSILAAAFRKALGSSENGTLKREQFEAWMDFDSVPEPVERRLFDAFCISEADQQVDLFNFVVGIWNYCLEGKSILSLLAFDIYDLNVSGTITEEDLKTMIVDMWGVDWEQDDNVKAMVEKRRDVDAMKIDKWNEFCRLHPRVLQPAFKLQQEMQELTLGRNRWAKISERVRKRREKI 210
            MG   SN++     +EI+ WP F ER C+TSSD+S +A AFRKA  SSE   L+R  FE W+D  S P+PVE RLF+ F I+  +QQ D                                                          + ++ +R  VD M+  +W +FCR +P +L P +KLQ+ +Q++T+G+ RWAK++E+++ R  K+
Sbjct:    1 MGATPSNTRQKEFVAEIQGWPGFVERMCMTSSDVSGIATAFRKATESSEGKYLQRADFEHWLDMGSKPKPVEERLFEVFIINSGEQQDDAL-------------------------------------------------------ARGLLAERVGVDPMQPTEWKDFCRSYPNLLHPIYKLQRTLQDMTIGKKRWAKLNEKMKLRAAKM 155          
BLAST of mRNA_A-nodosum_M_contig11.97.2 vs. uniprot
Match: A0A7S3HS01_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS01_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.870e-10
Identity = 50/203 (24.63%), Postives = 100/203 (49.26%), Query Frame = 0
Query:   10 NGAIASEI-RSWPNFQERTCLTSSDLSILAAAFRKALGSSENGTLKREQFEAWMDFDSVPEPV-ERRLFDAFCISEADQQVDLFNFVVGIWNYCLEGKSILSLLAFDIYDLNVSGTITEEDLKTMIVDMWGVDWEQDDNVKAMVEKRRDVDAMK-------IDKWNEFCRLHPRVLQPAFKLQQEMQELTLGRNRWAKISERV 203
            +G++ S I + W         T++++S+    F   + S  +G+++  +    +DF  +   +   R+F AF   +   ++D F FVV +W +C  GK  +S+ AFD+YD +  G +TE ++K M  D++   W     V+    +R   D +        I+ +  FC+++  ++ P   +Q +++   +G + W K+S R 
Sbjct:    4 SGSVTSNINKDWMAIFNAMQFTNAEISVFYEMF-VTVDSDHSGSIEIAEL---LDFLQIEGSMFTERIFSAFD-KDGTGKIDFFEFVVSLWKFCALGKESISVFAFDLYDTDCDGALTETEVKVMFHDLY---WYGSKAVEDEASRRALKDLLSLGEGTITIEGFRPFCQINTVLMLPLLTVQSKLRTTAMGTDFWEKMSNRT 198          
BLAST of mRNA_A-nodosum_M_contig11.97.2 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.370e-9
Identity = 45/159 (28.30%), Postives = 79/159 (49.69%), Query Frame = 0
Query:   45 LGSSENGTLKREQFEAWMDFDSVPEPVERRLFDAFCISEADQQVDLFNFVVGIWNYCLEGKSILSLLAFDIYDLNVSGTITEEDLKTMIVDMWGVDWEQDDNVKAM---VEKRRDV----DAMKIDKWNEFCRLHPRVLQPAFKLQQEMQELTLGRNRW 196
            +  + NGT+   +F  +  F+   +    RLF  F   + D ++     VVG+W YC    + +  L FD+ D++ +G I  ++   MIVD++G +WE++D  KA+     +R D       M +D W+ F   +P++  PA   +  +Q+  LG   W
Sbjct:    1 MNETGNGTVTLWEFREY--FNLPDDRSTTRLFRCFD-EDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFW 156          
BLAST of mRNA_A-nodosum_M_contig11.97.2 vs. uniprot
Match: A0A7S3H433_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H433_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.380e-9
Identity = 36/132 (27.27%), Postives = 70/132 (53.03%), Query Frame = 0
Query:   74 RLFDAFCISEADQQVDLFNFVVGIWNYCLEGKSILSLLAFDIYDLNVSGTITEEDLKTMIVDMWGVDWEQDDNVKAMV---EKRRDVDAMKIDKWNEFCRLHPRVLQPAFKLQQEMQELTLGRNRWAKISER 202
            R+F AF   +   ++D + FVV +W +C  G   +++ AFDIYD +  G +++ +   +  ++ G    +++  KA +     + + + + I+ +  FCR H  +L P F  QQ+M+   +G + W  +S R
Sbjct:   81 RIFSAFD-KDHTGKIDFYEFVVSLWKFCTLGDGAIAVFAFDIYDCDADGIMSQYEAAKLFSELGGGANSENEKTKAALLALGDKTEYNTILIEDFRTFCRTHQALLAPVFAAQQKMRTTAMGCSFWDNMSRR 211          
BLAST of mRNA_A-nodosum_M_contig11.97.2 vs. uniprot
Match: A0A7S3H1C1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1C1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.570e-7
Identity = 34/123 (27.64%), Postives = 66/123 (53.66%), Query Frame = 0
Query:   83 EADQQVDLFNFVVGIWNYCLEGKSILSLLAFDIYDLNVSGTITEEDLKTMIVDMWG---VDWEQDDNVKAMVEKRRDVDAMKIDKWNEFCRLHPRVLQPAFKLQQEMQELTLGRNRWAKISER 202
            + D +++ F FVV +W +C+ G   L++ AFD++D +  G ++E D+  M  ++ G       Q++ V A   K     +M ++++  F + H  +    F +Q+ M++ TLG   W  I++R
Sbjct:   78 DGDHRLNFFEFVVSLWKFCVLGDGSLNVFAFDMFDTDSDGILSEADVHVMFNELLGEHHAHTAQNEFVLADWRKHSRDGSMTVEQFRPFSQTHQALFHEIFTIQRRMRKRTLGIRYWHFITKR 200          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.97.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4U3_ECTSI9.990e-2932.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HS01_9STRA1.870e-1024.63Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D7FW22_ECTSI1.370e-928.30EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3H433_9STRA4.380e-927.27Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3H1C1_9STRA1.570e-727.64Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 19..175
e-value: 5.8E-13
score: 50.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..306
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 23..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:1287514..1292975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.97.2mRNA_A-nodosum_M_contig11.97.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 1275339..1294188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.97.2 ID=prot_A-nodosum_M_contig11.97.2|Name=mRNA_A-nodosum_M_contig11.97.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=535bp
MGVIASNSKNGAIASEIRSWPNFQERTCLTSSDLSILAAAFRKALGSSEN
GTLKREQFEAWMDFDSVPEPVERRLFDAFCISEADQQVDLFNFVVGIWNY
CLEGKSILSLLAFDIYDLNVSGTITEEDLKTMIVDMWGVDWEQDDNVKAM
VEKRRDVDAMKIDKWNEFCRLHPRVLQPAFKLQQEMQELTLGRNRWAKIS
ERVRKRREKIDKKNDNRLRAAVEEEDLQQVKAEILSEETATAVIVGTKAS
RMAAASKQQAKGKGGKCQPTEQTAVHMGPSQDGGTRKSWLRKSVDKRGRL
NAVKEDVDTNDVAPSPLGSPDCDLTQSNAGITDGTVPHADLAATPANTSD
YATSPSSSRASRRRASISQKLTPSLASAQVVDVRRVSGDTGGRRFSKVAL
PTIGSPERRQWAKSIQPGRRSSLAAASLGLNPHDSVVGAERRRHQSVFGI
AASDISKLRTSGDGFAFQTDQNTLLRRSSRSTTEEQKEPGEGGRRNYTNT
SSIPILPHPHRRISVADGSVAARKISRAVVAVDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair