prot_A-nodosum_M_contig11.75.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.75.2
Unique Nameprot_A-nodosum_M_contig11.75.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length741
Homology
BLAST of mRNA_A-nodosum_M_contig11.75.2 vs. uniprot
Match: D7G4U9_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4U9_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 1.470e-135
Identity = 338/860 (39.30%), Postives = 448/860 (52.09%), Query Frame = 0
Query:    1 MDRTLQSALEKRTRVGAWTTRVYRLERGYLSAWADVAKVAAKEEPSRTECLFQGNEVAKVIDQGDRRFKLEFPWDKAKSLQLRANTGAMKKSWMDVLKATIKEASAQIQGTGSVFAYGGAAHHEKDQAYEEAAFLQTNRFVAAYVVDEHSRMSYVNDILNEGFQQPGERADGERELHRACVGANTAIKEFMALIQDFDDEMQGLEALRRDGGGGQ------DAIVAAPKIRRFCEGYLALVGRLIASRLMLELSPFMDSSVATTSSAPRSSSRQQLIATRQKLDEAYAAAEQHIVLGTRDWFMDIRGSLLDCEGLATMSSEPPRPTPMLSSQR---------------------EDSPEISKPASPGR--SSQAML--------------DTASSSVTSSISSGLKAPEGEN----------RGEAEQGRTGFGG---------WSMRSAFRRGSRSEKKEEPSA----------PSQLTPALKHGQDELRSK------------------GKSISGPAEDEGRERSGLFGVSSRSASKSPLSTRNAERKASPAPNENQSNETFSAASAAPLASRNDSPARTSALATQKKEGGRNSRRAFAGGLWGTSGDSAAKNASHGDGPQSSGGVLAATISPGPREG--VVESTIAPAVEQAPPPVHVAGNTSRGDFPATTVAKPSGGKRRFAGGGFLAPXXXXXXASNTASRESGLIGVTGVPPFAAAG---------------------QSVPTSLQKERTPPPSAE---SLPAWA--AGAGQDIXXXAADGKASSVSSGGGGDRTAGFGVAPPSRGDQG-QEAAGKSPFMVAEAPAPAPRRPSQKR-GESGRAKRAFGGGQSLF 740
            MDR+LQS LEKRTRVGAW +RVYRLERGYLSAW D   VAAK++P+RTECLF  N+VA + DQGD+RFKL+FPWD +K+LQLR++  AMK++W+D+L+AT+ EA +QI+  GSVFAYGGAA H KD+AYEEA +L+TNRF+AAYVVDE SR SY+ND+LN+GF   G+RA  ER+ H AC G+ +AI E +AL +DF  EM+G+E LRR   G +      D  V APKI RFCE Y++LVGR I+SRLMLELSPFM++SVA +SSAP  S+R +L+ TR++LDEAYAA EQ ++LGTR WF+DIR   LDC GL   SS PP P P +++Q                      E     +  A   R  S++A+L              D A+   TS  ++G    + +N          RG +   + G GG          S+   F+R SR+  + E  +          P  ++P    G   +                     GK +S PAE E ++RS LFG SSRS S SP +             E+  N + ++ +  P AS +   A  +  +T                                          A  +    R+G  +V +T+A   +    P             A   +KPSGGKRRFAGG F  P       +   S      GV G  PFA A                      ++V +S+++E  P P  E    LPAWA  AGA + +   AA+      S        +G+G+APP       Q AA KSPFM  E  AP  RRPSQ+R GE+G ++RAFGGG+ LF
Sbjct:    1 MDRSLQSGLEKRTRVGAWQSRVYRLERGYLSAWPDAVSVAAKQDPTRTECLFLDNQVAVLTDQGDKRFKLDFPWDGSKTLQLRSSNSAMKQAWVDLLRATLDEAGSQIRAIGSVFAYGGAAQHAKDEAYEEATYLKTNRFLAAYVVDEQSRASYINDLLNDGFHHVGDRAGSERDAHNACAGSRSAIAELLALTEDFMKEMRGVEELRRGTQGSETSEGQLDGAVTAPKIERFCEEYMSLVGRTISSRLMLELSPFMETSVAGSSSAPTESTRAELVGTRRRLDEAYAATEQVVILGTRAWFVDIREYFLDCAGLEIASSRPPTPPPEVATQTAAFSXXXXXXXXXXXXXXAGAEAQSRTTPSAGSARRPSAKALLQVSNAFAVAKAATKDGATKIGTSWNATGRSTGKAKNSASDADGAPVRGGSPADQAGAGGKVNSTRGVSMSIPGVFKRASRTGSEMEERSDLGKPADGRTPVTMSPRGSGGPTSVAGNQAVQSSDAEVGVVMEGRGGKPVS-PAETEEQQRSDLFGGSSRSPSASPRAHGGKNSPVRRGKTESVLNASSASTAVPPSASEHVLSALVNPDSTXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXAAGNMKTDSRDGSTMVNTTVADEGQLKSVPA------------AIPKSKPSGGKRRFAGGVFSGPPQPPSQLNAAPSD-----GVQGENPFAGASDATTMRREGTGATHKSVVGANETVSSSIRREELPKPPREVEEPLPAWATEAGANESVPDWAANSSMDKPSK-----PPSGYGLAPPXXXXXXXQLAADKSPFMQREPDAPPKRRPSQRRPGETG-SRRAFGGGERLF 834          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.75.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4U9_ECTSI1.470e-13539.30PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..287
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..363
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 8..102
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 2..102
score: 7.0136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:1018318..1024200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.75.2mRNA_A-nodosum_M_contig11.75.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 1017997..1024200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.75.2 ID=prot_A-nodosum_M_contig11.75.2|Name=mRNA_A-nodosum_M_contig11.75.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=741bp
MDRTLQSALEKRTRVGAWTTRVYRLERGYLSAWADVAKVAAKEEPSRTEC
LFQGNEVAKVIDQGDRRFKLEFPWDKAKSLQLRANTGAMKKSWMDVLKAT
IKEASAQIQGTGSVFAYGGAAHHEKDQAYEEAAFLQTNRFVAAYVVDEHS
RMSYVNDILNEGFQQPGERADGERELHRACVGANTAIKEFMALIQDFDDE
MQGLEALRRDGGGGQDAIVAAPKIRRFCEGYLALVGRLIASRLMLELSPF
MDSSVATTSSAPRSSSRQQLIATRQKLDEAYAAAEQHIVLGTRDWFMDIR
GSLLDCEGLATMSSEPPRPTPMLSSQREDSPEISKPASPGRSSQAMLDTA
SSSVTSSISSGLKAPEGENRGEAEQGRTGFGGWSMRSAFRRGSRSEKKEE
PSAPSQLTPALKHGQDELRSKGKSISGPAEDEGRERSGLFGVSSRSASKS
PLSTRNAERKASPAPNENQSNETFSAASAAPLASRNDSPARTSALATQKK
EGGRNSRRAFAGGLWGTSGDSAAKNASHGDGPQSSGGVLAATISPGPREG
VVESTIAPAVEQAPPPVHVAGNTSRGDFPATTVAKPSGGKRRFAGGGFLA
PAAAAASASNTASRESGLIGVTGVPPFAAAGQSVPTSLQKERTPPPSAES
LPAWAAGAGQDIPAWAADGKASSVSSGGGGDRTAGFGVAPPSRGDQGQEA
AGKSPFMVAEAPAPAPRRPSQKRGESGRAKRAFGGGQSLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain