prot_A-nodosum_M_contig11.47.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.47.1
Unique Nameprot_A-nodosum_M_contig11.47.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length112
Homology
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: D8LN84_ECTSI (Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN84_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 8.090e-67
Identity = 106/110 (96.36%), Postives = 106/110 (96.36%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTLE 110
            MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEY AMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITD GDSDILRQ  E
Sbjct:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAE 110          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: A0A835YXX2_9STRA (Ribosomal protein rpl30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.560e-55
Identity = 87/111 (78.38%), Postives = 100/111 (90.09%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTLEL 111
            MAP KK+KK IES+N RLQLVM+SGKASLGYK T+K MR+++AKM++ISNNCPPLRKSEIEY A+LAKC VHHY+GSNTDLGTACGKYFRVSVL+ITD GDSDILR   E+
Sbjct:    1 MAPIKKAKKTIESINTRLQLVMRSGKASLGYKQTLKCMRTSKAKMIIISNNCPPLRKSEIEYYALLAKCNVHHYSGSNTDLGTACGKYFRVSVLAITDAGDSDILRTVPEV 111          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: A0A812PA55_SYMMI (RPL30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PA55_SYMMI)

HSP 1 Score: 170 bits (430), Expect = 8.930e-53
Identity = 82/108 (75.93%), Postives = 101/108 (93.52%), Query Frame = 0
Query:    1 MAP--GKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 106
            MAP  GKK+KK +ES+N+RLQLVM+SGKASLGYK+TIK++R+T+AK+V+IS+NCPPLRKSEIEY AMLAKC VHHY G+N+DLGTACGK++RVS+LS+TD GDSDILR
Sbjct:    1 MAPAAGKKTKKTVESINSRLQLVMRSGKASLGYKTTIKTLRNTKAKLVIISSNCPPLRKSEIEYYAMLAKCTVHHYAGTNSDLGTACGKFYRVSMLSVTDGGDSDILR 108          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA)

HSP 1 Score: 163 bits (412), Expect = 4.940e-50
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQ 107
            M   KK KKA ES+N+RL LVMKSGK +LGYKST+KS+R  +AK+++IS NCPPLRKSEIEY AMLAK  VHHYTG+N DLGTACGKYFRVS LSITDPGDSDI+RQ
Sbjct:    1 MVSTKKQKKAQESINSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDIIRQ 107          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: F0YHY8_AURAN (Ribosomal_L7Ae domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YHY8_AURAN)

HSP 1 Score: 162 bits (410), Expect = 9.370e-50
Identity = 75/110 (68.18%), Postives = 98/110 (89.09%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTLE 110
            MAP KKSKK++E++N+RLQLVMKSGK +LGYK+++K++RS ++K+VL++NN PPLRKSE+EY AML+KC V HY GSN DLGTACGKYF+VS+L++ DPGDSDI+R T E
Sbjct:    1 MAPAKKSKKSVENLNSRLQLVMKSGKVALGYKTSLKTLRSNKSKLVLLANNTPPLRKSEVEYYAMLSKCQVIHYNGSNVDLGTACGKYFKVSMLTVIDPGDSDIVRSTEE 110          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: B0Z9N1_9BILA (60S ribosomal protein L30 n=2 Tax=Lineidae TaxID=6222 RepID=B0Z9N1_9BILA)

HSP 1 Score: 161 bits (408), Expect = 2.280e-49
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 106
            MAP KK+KKAIE++N+RL LVMKSGK  LGYK T+K++R  +AK+V+I+NN PPLRKSEIEY AMLAK  VHHY G+N DLGTACGKYFRV+VLSITDPGDSDI+R
Sbjct:    1 MAPTKKTKKAIENINSRLALVMKSGKCVLGYKQTLKTLRQGKAKLVIIANNTPPLRKSEIEYYAMLAKTGVHHYNGNNIDLGTACGKYFRVTVLSITDPGDSDIIR 106          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: A0A7S3HF33_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF33_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.040e-49
Identity = 75/104 (72.12%), Postives = 97/104 (93.27%), Query Frame = 0
Query:    4 GKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQ 107
            GKK+KKA+ES+N+++QLVMKSGK +LGYK+TIK++R+ +AKMVLI++N PPLRKSE+EY AMLAKC VHHY G+N++LGTACGK++RVS++SITD GDSDILRQ
Sbjct:    9 GKKTKKAVESINSKVQLVMKSGKTALGYKTTIKALRANKAKMVLIASNTPPLRKSEVEYYAMLAKCVVHHYAGNNSELGTACGKFYRVSMVSITDAGDSDILRQ 112          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: A0A261XVZ6_9FUNG (60S ribosomal protein L30-1 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVZ6_9FUNG)

HSP 1 Score: 160 bits (405), Expect = 5.250e-49
Identity = 79/105 (75.24%), Postives = 94/105 (89.52%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDIL 105
            MAP KKSKK++ES+N+RLQLVMKSGK +LGYKST+KS+R+ +AK++LI+ NCPPLRKSEIEY AML+K  VHHYTG+N +LGTACGK FR SVLSITD GDSDIL
Sbjct:    1 MAPVKKSKKSVESINSRLQLVMKSGKYNLGYKSTLKSVRAGKAKLILIAGNCPPLRKSEIEYYAMLSKTGVHHYTGNNIELGTACGKLFRCSVLSITDAGDSDIL 105          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: A0A1Y1Z8Q1_9FUNG (60S ribosomal protein n=4 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8Q1_9FUNG)

HSP 1 Score: 160 bits (404), Expect = 7.940e-49
Identity = 76/106 (71.70%), Postives = 96/106 (90.57%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILR 106
            MAP KKSKK++ES+N+RL LVMKSGK++LGYKST+KS+R+ +AK++++S NCPPLRKSEIEY AML+K +VHHY G+N +LGTACGKYFRV VL+ITD GDSDIL+
Sbjct:    1 MAPIKKSKKSVESINSRLALVMKSGKSNLGYKSTLKSIRNGKAKLIILSGNCPPLRKSEIEYYAMLSKTSVHHYNGNNIELGTACGKYFRVGVLAITDAGDSDILK 106          
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Match: A0A7S2USR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR9_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.330e-48
Identity = 80/112 (71.43%), Postives = 96/112 (85.71%), Query Frame = 0
Query:    1 MAPGKK--SKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPGDSDILRQTLE 110
            MAP KK  SKK +E+MN++LQLVMKSGKASLGYKS+IK++R+ +AK+VL+S NCPPLR+SEIEY AMLAK  VHHY G+NTDLGTACGKYFRV VL +T+ GDS+ILR   E
Sbjct:   38 MAPSKKVSSKKTVENMNSQLQLVMKSGKASLGYKSSIKALRNNKAKLVLVSKNCPPLRRSEIEYYAMLAKVGVHHYAGNNTDLGTACGKYFRVGVLCVTNAGDSEILRSIPE 149          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN84_ECTSI8.090e-6796.36Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXX2_9STRA1.560e-5578.38Ribosomal protein rpl30 n=1 Tax=Tribonema minus Ta... [more]
A0A812PA55_SYMMI8.930e-5375.93RPL30 protein n=1 Tax=Symbiodinium microadriaticum... [more]
L8GX53_ACACA4.940e-5075.7060S ribosomal protein, putative n=1 Tax=Acanthamoe... [more]
F0YHY8_AURAN9.370e-5068.18Ribosomal_L7Ae domain-containing protein n=2 Tax=P... [more]
B0Z9N1_9BILA2.280e-4974.5360S ribosomal protein L30 n=2 Tax=Lineidae TaxID=6... [more]
A0A7S3HF33_9STRA3.040e-4972.12Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A261XVZ6_9FUNG5.250e-4975.2460S ribosomal protein L30-1 n=1 Tax=Bifiguratus ad... [more]
A0A1Y1Z8Q1_9FUNG7.940e-4971.7060S ribosomal protein n=4 Tax=Basidiobolus meristo... [more]
A0A7S2USR9_9STRA1.330e-4871.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 3..108
e-value: 2.0E-48
score: 164.4
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 13..106
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
e-value: 1.9E-22
score: 78.8
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 4..108
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:540344..545728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.47.1mRNA_A-nodosum_M_contig11.47.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 540344..546506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.47.1 ID=prot_A-nodosum_M_contig11.47.1|Name=mRNA_A-nodosum_M_contig11.47.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=112bp
MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISN
NCPPLRKSEIEYLAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDPG
DSDILRQTLEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR039109L30/L30e/YlxQ
IPR022991Ribosomal_L30e_CS