prot_A-nodosum_M_contig1096.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1096.30.1
Unique Nameprot_A-nodosum_M_contig1096.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length671
Homology
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Match: D7FP39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP39_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.210e-120
Identity = 286/698 (40.97%), Postives = 356/698 (51.00%), Query Frame = 0
Query:   68 GQPSTLPWSPDRFYINELPCLRD------GDDSRARRKRYCGGGGGHDGDAGHXXXXRPREEGQGGNIFFSLRRLVEVVTGDGWPGLKGVILGTYSLDLRKLSEECPAL-----MTTPTLILHGDKRLGRTNGSD-------RPESGCRTDGTSTSAS---TDGDGGGDAEHKWLVRRGLGDDVSPERRRRDMEQSGRRDRLLGWEMSLPSQLHLEKVNAGSRGVHHPKFGMLFLKDGSLVMYVGTGNLGADTAIDATWVQRFGAKSAIKGHKSGRLGEPGGSSGLD--GTSEEEGAWEGDFAETLQDFLEQESRLVSRGKKNFRVHP--------NTPVEFMRRVLGVEHVGESFDFSAALVDLVPTVPT------------------------------------------------------VPIDTGQGGPTWSRGQGHR------------------------------------ACDGGSGDCNGDWERGAEHESGGP-----RHYG-QLRLRYVLGRRRRQAGELGPSDVLIVQPTSVGLGVDHAFMEVFAASCMPDSVEPCGQAWKQHIESRLESSRVVWPSGQYMDASRAVMSKSSCLSDRQAATSMEVSSRYVLGESDKDAKRVKCGFLFMTPQTLESMGVDLRDCLRTFHLNPT--LGLPLRPAHVKSLMRLRPAPQPFEKSISPRP 636
            G   +LPW  DRFY+N +P +R+      G+D +  +           G   H         G     FFSL RLV+VV+G G PG+K  I GT SL + +L+EE P+L     +T P L+LHG+K L R   S        R E+          AS   T+ D G D     L R  LG + S E+R R ++ +GR DRL  WEMS+P+ + +EKV+ G  GVHHPKFG+LFLKD SLV+YVGTGNLG DTAIDATWVQRFG  +          GE   +  LD  GTSE    W+GDF  TLQ FL   SRL+ R   N +V          NTP+EFM R LG+E +G+SFDF  A VDLVPTVPT                                                      +P+ T Q      RG G R                                    A DGG      D E G   E GG      R+YG QLR++Y+L +RR Q  E GP D+LI+QPTS+G G+D  F+E+FA + MPDS  P   AWK   ESRL+S R+VWPS QYM A R  MSKS+ L DRQA+T MEV  +YV+GE  K       GF+FM+P   + MG+DL  CL+TF L+P   L LPLRPAHVKS+MRLR AP     S+ P+P
Sbjct:   43 GHDLSLPWLADRFYLNVIPAVRESERNGQGEDWKISQDTNVKSESNRSGSK-HDGGGDSVGRGYANGPFFSLERLVDVVSGKGGPGIKAAIFGTMSLQIGRLAEEIPSLFSRSNLTVPVLVLHGEKSLRRLRDSSAEVINTTRGEAAXXXXXXKGGASDYRTNSDHGADY---ILFRESLGKNASSEQRER-LKAAGREDRLDYWEMSMPAHVQVEKVHTGGLGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRFGQSNK---------GEAACTRDLDNGGTSE----WKGDFGVTLQAFLAGYSRLM-RQDPNKKVGTATSRRRLRNTPMEFMLRELGIERLGDSFDFRTAAVDLVPTVPTPMGATLSVSLQPNSNESTCWDGGRGGGNTPVESSSRSCWQDPCLASPSMSPLPLLPVSTHQENGATRRGGGGRLSAATGSGDGEDPDDDLDGQRAADSAATSSRADDFDAPDGGPARGAPDTEGGDAIECGGAGGTDLRYYGGQLRMKYLLSKRRGQVEEAGPEDLLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWK---ESRLDSVRIVWPSMQYMGACRKEMSKSTLLRDRQASTIMEVDHKYVMGEDGKTPDWDNNGFVFMSPDQFDGMGLDLHCCLQTFQLHPATALALPLRPAHVKSVMRLRKAPF----SLRPQP 714          
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Match: A0A6H5KRI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI8_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 3.040e-50
Identity = 102/181 (56.35%), Postives = 125/181 (69.06%), Query Frame = 0
Query:  454 GQLRLRYVLGRRRRQAGELGPSDVLIVQPTSVGLGVDHAFMEVFAASCMPDSVEPCGQAWKQHIESRLESSRVVWPSGQYMDASRAVMSKSSCLSDRQAATSMEVSSRYVLGESDKDAKRVKCGFLFMTPQTLESMGVDLRDCLRTFHLNPT--LGLPLRPAHVKSLMRLRPAPQPFEKSI 632
            GQLR++Y+L +RR Q  E GP DVLI+QPTS+G G+D  F+E+FA + MPDS  P   AWK   ESRL+S R+VWPS QYMDA R  MSKS+ L DRQ +T+MEV  +YV+GE  K       GF+FM+P   + MG+DL  CLRTF L+P   L LPLRPAHVKS MRLR AP P    +
Sbjct:  273 GQLRMKYLLSKRRSQVEEAGPEDVLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWK---ESRLDSVRIVWPSMQYMDACRKEMSKSTLLRDRQVSTTMEVDHKYVMGEDGKTPDWDNNGFVFMSPDQFDGMGLDLHCCLRTFQLHPATALALPLRPAHVKSAMRLRKAPFPLRPQL 450          
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Match: K0TAQ0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAQ0_THAOC)

HSP 1 Score: 76.3 bits (186), Expect = 1.430e-10
Identity = 102/395 (25.82%), Postives = 154/395 (38.99%), Query Frame = 0
Query:  270 GVHHPKFGMLFLKDGSLVMYVGTGNLGADTAIDATWVQRFGAKSAIKGHKSGRL--GEPGGSSGLDGTSEEEGAWEGDFAETLQDFLEQESRLVSRGKKNFRVHPNTPVEFMRRV----LGVEHVGESFDFSAALVDLVPTVP-----TVPIDTGQGGPTWSRGQGHRACDGGSGDCNGDWERGAEHESGGPRHYGQLRLRYVLGRRRRQAGELGPS----------------DVLIVQPTSVGLGVDHAFMEVFAASCMPDSVEPCGQAWKQHIESRLESSRVVWPSGQY---MDASRAVMSKSSCLSDRQAATSMEVSSRYVLGESDKDAKRVKCG--------FLFMTPQTLESMGVDLRDCLRTFHLNPTLGLPLRP-----AHVKSLMRL 621
            GV+HPKF +LF KDGSL + + T NL + TAI+ +WVQRF  K  + G  S  +  G P                  DF   L DFLE++S   + G          P  FMRR     + ++++   + F  A V LV TVP      VP+  G+  P  +                                YG  R+  +L  +R  A  LG S                D L++QPTS+G       +E    + + D  E      K    S +E   ++WP   Y   M ASR    K  CL+  Q   + E   +   G+ D++A +            F+F++ +    +   +   +  F ++  +   L P      H+KS+ RL
Sbjct:  464 GVNHPKFFLLFEKDGSLTVIISTSNLTSTTAIEGSWVQRFKPKE-LNGQSSSNVDYGMP-----------------SDFGIVLADFLEKQSAAAANGM--------VPEVFMRRFVDRDISLQNLSNRYHFEEAQVHLVSTVPGDYPGQVPVVQGRR-PQMT--------------------------------YGANRVESIL--KRIDATGLGKSLNDGRPWIPETLRDKRDQLLIQPTSLGGNWKQDDLEALVEAYLCDEFEK-----KDDASSIIERLNIIWPDFDYFHRMKASRRATWKK-CLA--QEGITKEAHQKQRKGK-DRNAAQALLEDKSWSGDMFVFLSSEAFSKLERSVIGRMSLFQMSNNMRENLMPYTSVALHIKSVCRL 788          
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Match: B8CAD5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAD5_THAPS)

HSP 1 Score: 74.7 bits (182), Expect = 3.890e-10
Identity = 53/144 (36.81%), Postives = 71/144 (49.31%), Query Frame = 0
Query:  269 RGVHHPKFGMLFLKDGSLVMYVGTGNLGADTAIDATWVQRFGAKSAIKGHKSG-RLGEPGGSSGLDGTSEEEGAWEGDFAETLQDFLEQESRLVSRGKKNFRVHPNTPVEFMRRV-----LGVEHVGESFDFSAALVDLVPTVP 406
            RGVHHPKF +LF K GSLV+ + T NL + TA+DA+WVQRF  K  ++   +   LG P                  DF   LQD L +++          +V+   P  F+RR      LG+  +   + F AA V LV TVP
Sbjct:  617 RGVHHPKFFLLFEKRGSLVVIISTSNLTSPTALDASWVQRFEQKELLQHRNTAIDLGMP-----------------SDFGVILQDLLAKQTNAA-------KVNSMVPDIFLRRYVDGLSLGLSALSNRYRFDAAQVHLVSTVP 736          
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Match: A0A1Z5KBN2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBN2_FISSO)

HSP 1 Score: 60.1 bits (144), Expect = 1.200e-5
Identity = 88/375 (23.47%), Postives = 151/375 (40.27%), Query Frame = 0
Query:  264 VNAGSRGVHHPKFGMLFLKDGSLVMYVGTGNLGADTAIDATWVQRFGAKSAIKGHKSGRLGEPGGSSGLDGTSEEEGAWEGDFAETLQDFLEQESRLVSRGKKNFRVHPNTPVEFMRRVLGVEHVGES---FDFSAALVDLVPTVPTV-PIDTGQGGPTWSRGQGHRACDGGSGDCNGDWERGAEHESGGPRHYGQLRLRYVLGRRRRQAGE---LGPS-----DVLIVQPTSVGLGVDHAFMEVFAASCMPDSVEPCGQAWKQHIESRLESSRVVWPSGQYMDASRAVMSKSSCLSDRQAATSMEVSSRYVLGESDKDAKRVKC-GFLFMTPQTLESMGVDLRDCLRTFHL-NPTLGLPLRPA---HVKSLMRL 621
            V    +GVHHPK+ +LF   G+++  V T N+     IDA+W+QRF   +  K                          E   A +  DF    +  +     + R H  T   F++R LG + + +    + F  A V L+P VP + P++     P   +                  E   + +S     +GQ R+  VL  ++  AG+   L PS     D L+ QPTS+G     A   V   S M  +        + H++  L+   ++WP+  Y+   + V+  ++        TS  + + +    S   + ++ C G+LF++ +T   + +D   CL    L  P    P +     H+KS+ R+
Sbjct:  247 VRKSCKGVHHPKYMLLFETSGAVIAVVSTANMTTSRTIDASWMQRFPPINHRK--------------------------ENSTAPSCSDFGLALAHFMQHQMLSTRAHQMTLTTFLQRHLGWKSLRDLLRLYSFDEAQVHLMPIVPGIFPLEV----PAPPK------------------EEDIKKKS--TVLFGQQRMAQVL--QQLTAGKSPSLPPSLLSDHDRLLCQPTSLG-----AEWTVEQMSSMVHAYLGHVIPQRPHVDM-LKRLDIIWPTDYYVQQVKTVLHDATT-----TTTSASILNAFPTENSSHASSQLACSGYLFLSSETFNRIPID---CLSRMVLWEPCYPSPQKTTLVPHIKSIARV 555          
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Match: A0A1Z5JI13_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI13_FISSO)

HSP 1 Score: 57.8 bits (138), Expect = 6.280e-5
Identity = 91/375 (24.27%), Postives = 155/375 (41.33%), Query Frame = 0
Query:  264 VNAGSRGVHHPKFGMLFLKDGSLVMYVGTGNLGADTAIDATWVQRFGAKSAIKGHKSGRLGEPGGSSGLDGTSEEEGAWEGDFAETLQDFLEQESRLVSRGKKNFRVHPNTPVEFMRRVLGVEHVGES---FDFSAALVDLVPTVPTV-PIDTGQGGPTWSRGQGHRACDGGSGDCNGDWERGAEHESGGPRHYGQLRLRYVLGRRRRQAGE--------LGPSDVLIVQPTSVGLGVDHAFMEVFAASCMPDSVEPCGQAWKQHIESRLESSRVVWPSGQYMDASRAVMSKSSCLSDRQAATSMEVSSRYVLGESDKDAKRVKC-GFLFMTPQTLESMGVDLRDCLRTFHL-NPTLGLPLRPA---HVKSLMRL 621
            V    +GVHHPK+ +LF   G+L++ V T N+     IDA+W+QRF         + G    P  SS              DF   L  F++ +  ++S      R +  T   F++R +G + + +    + F  A V L+P VP + P+D     P       HRA                E +      +GQ R+  VL  ++  AG+        L   D L+ QPTS+G     A   V   S M  +        +  ++S L+   ++WP+  Y+   +AV+         +  T+  + + +    +   + ++ C G+LF++ +T   + +D   CL    L  P    P +     H+KS+ R+
Sbjct:  262 VRKSCKGVHHPKYMLLFETSGALIVVVSTANMTTSRTIDASWMQRFPPLD-----RKGNTPTPSSSSS-------------DFGLALAHFMQHQ--MLST-----RANQMTLTVFLQRHVGWKSLRDLLRLYSFDKAQVHLMPIVPGIFPLDV----PVP-----HRA------------PPKEESKKKSFVFFGQQRMAQVL--QQLTAGKSPWLPPDLLSDHDRLLCQPTSLG-----AEWTVEQMSSMVHAYLSHAIPQRPQVDS-LKRLDIIWPTDYYVQQVKAVL--------HEGVTTC-IPNAFPTEYNAHASSQLACSGYLFLSSETFNRIPID---CLSQMVLWEPCYPSPQKTTLVPHIKSIARV 570          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FP39_ECTSI3.210e-12040.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRI8_9PHAE3.040e-5056.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K0TAQ0_THAOC1.430e-1025.82Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8CAD5_THAPS3.890e-1036.81Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Z5KBN2_FISSO1.200e-523.47Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JI13_FISSO6.280e-524.27Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.870.10Endonuclease Chain Acoord: 125..363
e-value: 7.0E-6
score: 27.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..657
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1096contigA-nodosum_M_contig1096:204762..213184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1096.30.1mRNA_A-nodosum_M_contig1096.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1096 204762..213185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1096.30.1 ID=prot_A-nodosum_M_contig1096.30.1|Name=mRNA_A-nodosum_M_contig1096.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=671bp
RERRPLKRQRAPVGVSPGEPDILEPAPDTPPDTPGTVGVAASAAAASTPP
RRPRCDCVDANRSLKERGQPSTLPWSPDRFYINELPCLRDGDDSRARRKR
YCGGGGGHDGDAGHGGGGRPREEGQGGNIFFSLRRLVEVVTGDGWPGLKG
VILGTYSLDLRKLSEECPALMTTPTLILHGDKRLGRTNGSDRPESGCRTD
GTSTSASTDGDGGGDAEHKWLVRRGLGDDVSPERRRRDMEQSGRRDRLLG
WEMSLPSQLHLEKVNAGSRGVHHPKFGMLFLKDGSLVMYVGTGNLGADTA
IDATWVQRFGAKSAIKGHKSGRLGEPGGSSGLDGTSEEEGAWEGDFAETL
QDFLEQESRLVSRGKKNFRVHPNTPVEFMRRVLGVEHVGESFDFSAALVD
LVPTVPTVPIDTGQGGPTWSRGQGHRACDGGSGDCNGDWERGAEHESGGP
RHYGQLRLRYVLGRRRRQAGELGPSDVLIVQPTSVGLGVDHAFMEVFAAS
CMPDSVEPCGQAWKQHIESRLESSRVVWPSGQYMDASRAVMSKSSCLSDR
QAATSMEVSSRYVLGESDKDAKRVKCGFLFMTPQTLESMGVDLRDCLRTF
HLNPTLGLPLRPAHVKSLMRLRPAPQPFEKSISPRPGYGGGADLGVQKGS
PGRRGDGHSRVNDVFCGSFVE
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