prot_A-nodosum_M_contig1093.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1093.14.1
Unique Nameprot_A-nodosum_M_contig1093.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1124
Homology
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BLAST of mRNA_A-nodosum_M_contig1093.14.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 3.480e-54
Identity = 198/417 (47.48%), Postives = 229/417 (54.92%), Query Frame = 0 
Query:    1 MLAFQRECEARAAAQ----------VKAELETFRERELSALRLQMNATQRXXXXXXXXXXQARYDARVERLQEVEAGRXXXXXXXXXXXXXXQFDARQNLLRELDLVRAREQEVRRGAELDARAIRAEEHRLRDLAVSLEARAEEVRRLERGGARGREAALEAAKHEARQALEVREEGIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------EKSRGRHAEAIRRAVVERDALKAEVERLRERERLWEEEATELRRALSSAEMERDGAERRADEEECERTALDSQVEELRVALRRSRDAIEAIRLCDVEAEA 372
            MLA+QRECE+RAAAQ          +KAE ++FRER+L+ALR+QM +T+R          Q++YDARVERLQE E  R XXXXXXXXXXXXX           +DL+R REQEVRR AELD+R +RAEE RLRDLAVSLEARAEEVRR ER GARGRE AL+AA+HEARQ+LEV+EEG+AR                                                                     XXXXXXXXXXX                                                        E+ R R A+++R+A  ERDALKAE  RLRERER WE       +ALSSAE++RD AE RA+EEECER+ALD QVEELR ALRRSRDAIEAIRLCDVEAEA
Sbjct:  329 MLAYQRECESRAAAQASCWVAPRLLIKAERDSFRERDLAALRVQMASTRRREVDAMRKELQSQYDARVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXXXMDLLRTREQEVRRSAELDSRGVRAEELRLRDLAVSLEARAEEVRRREREGARGREDALQAARHEARQSLEVKEEGVARERCGVVGRGWEKRGEGGGGGGTGFPGGIAVLDHQRSEEFLKKEMEAVRAERKACQEQLSQHAETSRALQXXXXXXXXXXXRATAAEAEAERAAEQAAVYKEAYQMRREVTVEGDRAFVRLGRQELEGRVRSLEASMEEERARQAKSLRKATEERDALKAEATRLRERERQWEAXXXXXXQALSSAELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAEA 745
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BLAST of mRNA_A-nodosum_M_contig1093.14.1 vs. uniprot
Match: A0A6H5KLA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA2_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 6.890e-24
Identity = 69/100 (69.00%), Postives = 81/100 (81.00%), Query Frame = 0 
Query:  273 EKSRGRHAEAIRRAVVERDALKAEVERLRERERLWEEEATELRRALSSAEMERDGAERRADEEECERTALDSQVEELRVALRRSRDAIEAIRLCDVEAEA 372
            E+ + R A+++R+   ERDALKAE  RLRERER WE      R+ALSSAE++RD AE RA+EEECER+ALD QV+ELR ALRRSRDAIEAIRLCDVEAEA
Sbjct:    2 EEEKARQAKSLRKVTEERDALKAEATRLRERERQWEXXXXXXRQALSSAELDRDRAEHRAEEEECERSALDGQVQELRAALRRSRDAIEAIRLCDVEAEA 101
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1093.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGY8_ECTSI3.480e-5447.48LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KLA2_9PHAE6.890e-2469.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 640..709
NoneNo IPR availableCOILSCoilCoilcoord: 983..1003
NoneNo IPR availableCOILSCoilCoilcoord: 159..207
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
NoneNo IPR availableCOILSCoilCoilcoord: 283..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1026..1053
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 820..839
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 993..1096
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 993..1025
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 728..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 548..567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1093contigA-nodosum_M_contig1093:248361..258280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1093.14.1mRNA_A-nodosum_M_contig1093.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1093 248352..259844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1093.14.1 ID=prot_A-nodosum_M_contig1093.14.1|Name=mRNA_A-nodosum_M_contig1093.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1124bp
MLAFQRECEARAAAQVKAELETFRERELSALRLQMNATQRRELDAARKEL
QARYDARVERLQEVEAGRERRNAERLRDAEMAQFDARQNLLRELDLVRAR
EQEVRRGAELDARAIRAEEHRLRDLAVSLEARAEEVRRLERGGARGREAA
LEAAKHEARQALEVREEGIAREREFLRQEMEAVRAERKACQEQLSQHAET
ARALQEARSEALAQEARGSAAEANAERAAEHAAVYREAYEMHREVAVEGD
HAYVRLGRAELEEALRSTEAALEKSRGRHAEAIRRAVVERDALKAEVERL
RERERLWEEEATELRRALSSAEMERDGAERRADEEECERTALDSQVEELR
VALRRSRDAIEAIRLCDVEAEAPSRAPHPAPAATTVIAAGGNPACDMTRP
SAKMVVERAELPSAWRPRFGAIVGKGVGGFLSPGWCEFERPQRSLGEEDG
TGFVDVGGAERWSIDCGRKHEQPRRAASRRSRRDDSPSTFWTGVASRQPE
LVSGIRFSERSVDSSVVSGYWSEGANAVADAVEVKVAGVIIREGWSGQRD
GRPARGNSHTASITSGGGAVSSCRQVFDENRRRRSCYRVRRRARHNEEEA
PSSDATEGQEASGELCRSNNRPSSAAPAAPTRSKIEAIELAKAAERLLAA
EAERMAMARELEADRASLRKREEAAREQERSREREAERLRREEAEVAVMQ
LRLAVEEDKAAAVATAARRMKARLSIERLARGEERESCEEAEEEPGRRRR
RGRNAAEEVLERRGEELRSVVAPTLQEASFKTQAPAGSINVSPREEALVI
QRTERQQAQKIPAPKTGKTPRGLTATSAPPETNQDSATPPEALPLVAAAA
AGMKMSAWSSEGASRGVAKVLEEKLAPAGVGGDYYPPAVRPPPANLSLAT
TPHLSAAAVDLSSTDHLDIVVAVTSRTGGEGVGGAVVLEQGKTGVDNGSG
CGGNGDGGVVPEEIQDVEVDTSVTAKAEVCVKASEADREVEAFREKIRQR
RQQHLNAPAEADDAAVGDKKNAPQRHYQRSITTPKEGSVSGLSENSTGTM
VELEVGGGNQGPGASPTTPISDSRENLKRDLDEVGASVDASSSVGGSGRF
LEAGGSTGVGSVVSGGGSVDDWF*
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