prot_A-nodosum_M_contig1090.5.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1090.5.4
Unique Nameprot_A-nodosum_M_contig1090.5.4
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length510
Homology
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BLAST of mRNA_A-nodosum_M_contig1090.5.4 vs. uniprot
Match: D8LGU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU3_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 6.550e-91
Identity = 206/494 (41.70%), Postives = 278/494 (56.28%), Query Frame = 0 
Query:    4 EIKHVILVLPAFQSALCSLMASSTFISILDHERWMKDWGGELETVSVLHLQMPIFSAAIAMGIGGILTVHHETLGSIEFENE-EHRSSVLLTTLAGFVAVATMFTMLYIARKDAFAGVERVDRLKGFIMKARRHFSYSSISSL-LNKGLGLKMAYGGKLKHVLGAGIILGTGLFTCWFIQMAGVVGDFFIVWRAWPIASLAIFLLALSVISSWLLFRLLVWKPANEAFRVLCALFLALNVWLVDHL--------------GFAYAIRLEDLNGRTPQRNVGPSLPAGLASNQLLLVLLAFGAVITQYAITLELRVAYCGLQDENFDLQVMTGSSGTDAGM--ASAVN---TMRRNSNQGNRT--------PARPKRRASVSPTGTADSPAGMGMKVVATAATAVGGMAAGGSSSSFTKMGRVASTIMRIDSTKEMKDSMLKSKSNVVDAVCRMGTSSSRMPLETM--RSIRVQPE-DQGKSKAYKPTTGEVDEE 465
            EI   + V PA  +A CSL++S T ISILDHERWMK+WG E E V+V+HL+ PI SAA+AMGIGGI TVH   L S+  + E E   +VL T LA    + TMF MLY+ARKD F GV+RV+RLK  I+K  RH    +I+ L L KGLG K AY G+L+H++ AG IL  G+  CW + + G+ G+F +VWR   I  LA +LL  S++S WLLFR+LVWKP+ E  R LC++  A+++W  D L              G   AI  E       +  +G S+ A     + L++++AFGAV+TQYAI LELR+AYCGLQD N DLQ++ G+   +  +   SA+    + RR++ QG RT        PAR +RR+ V     A S A   M +  T +    G   GG   +                      + L + + VV A+ RMG  S  +P ++   RSIRVQP  D  K   Y+P+  E  EE
Sbjct:    3 EISQGVYVTPALNAAACSLLSSYTLISILDHERWMKEWGDEHEAVAVMHLRTPILSAAVAMGIGGITTVHQVALSSLRLDGEIELGGNVLCTCLAAVTGITTMFAMLYVARKDTFGGVDRVERLKEVILK--RH----TIAELKLKKGLGKKAAYLGQLQHIVAAGTILAMGILGCWALNVLGLTGEFMVVWRTSGIVVLAFYLLVTSIVSCWLLFRVLVWKPSYEYLRPLCSVVFAISLWSADLLQRGSIDCHVCVQAVGKTIAITFEYTGDGLGRVGLGWSVGASRDGGEWLMIMMAFGAVMTQYAIALELRLAYCGLQDTNLDLQLLAGTGAPEEHIRKTSAIKNNTSKRRHTGQGGRTGNTGSRSPPARSRRRSVVVHASAAASFASPTMNLTRTFSP---GSTGGGDGLA-------------------KHPAHLSASAGVVSALLRMGQKSIGLPTKSSQSRSIRVQPAMDCSKVLVYEPSVAEDPEE 468
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1090.5.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGU3_ECTSI6.550e-9141.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1090contigA-nodosum_M_contig1090:44333..48518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1090.5.4mRNA_A-nodosum_M_contig1090.5.4Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1090 42899..49242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1090.5.4 ID=prot_A-nodosum_M_contig1090.5.4|Name=mRNA_A-nodosum_M_contig1090.5.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=510bp
MGSEIKHVILVLPAFQSALCSLMASSTFISILDHERWMKDWGGELETVSV
LHLQMPIFSAAIAMGIGGILTVHHETLGSIEFENEEHRSSVLLTTLAGFV
AVATMFTMLYIARKDAFAGVERVDRLKGFIMKARRHFSYSSISSLLNKGL
GLKMAYGGKLKHVLGAGIILGTGLFTCWFIQMAGVVGDFFIVWRAWPIAS
LAIFLLALSVISSWLLFRLLVWKPANEAFRVLCALFLALNVWLVDHLGFA
YAIRLEDLNGRTPQRNVGPSLPAGLASNQLLLVLLAFGAVITQYAITLEL
RVAYCGLQDENFDLQVMTGSSGTDAGMASAVNTMRRNSNQGNRTPARPKR
RASVSPTGTADSPAGMGMKVVATAATAVGGMAAGGSSSSFTKMGRVASTI
MRIDSTKEMKDSMLKSKSNVVDAVCRMGTSSSRMPLETMRSIRVQPEDQG
KSKAYKPTTGEVDEEGLTAAGDCRSPKASDPSEAIRPQTGGTGGVSGAPL
MLKLPPHSR*
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