prot_A-nodosum_M_contig1090.14.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1090.14.2
Unique Nameprot_A-nodosum_M_contig1090.14.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length704
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1090.14.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 471..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..703
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1090contigA-nodosum_M_contig1090:134465..140679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1090.14.2mRNA_A-nodosum_M_contig1090.14.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1090 134448..154064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1090.14.2 ID=prot_A-nodosum_M_contig1090.14.2|Name=mRNA_A-nodosum_M_contig1090.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=704bp
MTTPGNRAPSEEGEIPDASSPHDKDVSGDTMPSADSSGSSQEDTASATAE
ADGGGHSGSFRGIGTGSVRDGRGGRDAPVEDTQSDGGDDRGDPEARHGRD
RGRSRDRDGEPGRVGSGGGGGSGPGGMFPIRFDSRNGGAYRIPDGVGMGG
MGGRVGRRGPMSGTRWTGGMRGGGGPGLGRGGRWMGGGGGVGGRGGNFVG
FQNYADLAVRPGGFGGGGRGGVGGSPGPGGMGGGGFGGGVIGGRGYAELA
ASRGSDERRRNSGDDERRRGSGFGGGSGSGDEDDRRRRSHSGGSATSGRR
SSGLSINGRSSPSPGAGSDRAGGRGNKSPFGSHDLEGDGVGEHGRRVVGW
GERDRDRERRGDRDRATPREPRENRPGERDRDRDRPRQGGDGAGGEKRDS
MTERSRDYRRDAPIPSAAQGSSGGGPLLATVPPSLGRRESATGAKDYGRE
AWDNRPPSLRISGGVSAAWGDAREREWDREWDRDRSRDRSGDRSGDRSRD
RNRERDRDRGRGNRGRGSTSPLTRGSSPLSIAAAAASLDAHAHTGGRFDG
GGDGDIGSTRVSTGAFRYDHEHDVEASEVPPPPPTRRAVSAGGGDTHPPA
YTQQRRFSSSGYAPVHRRDNNSGASGRSTETAKGVSGVVRGGISGAEVPE
ANRSGFDGRAAVAGRSVSSGPTLRVTNPDAFKGVDADGESGGGVDELALF
GRG*
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