prot_A-nodosum_M_contig1084.15.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1084.15.3
Unique Nameprot_A-nodosum_M_contig1084.15.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length602
Homology
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: D8LKP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP8_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 8.970e-79
Identity = 138/211 (65.40%), Postives = 162/211 (76.78%), Query Frame = 0
Query:   23 GVEGLTFGTGVTKGTVQRRAEAKVSGACNRPRP-SRPPMADRVEVTLAEADFLNARWDKDMDTLLRVGVLRYGGAWEEVSTHMAPHGCPKDEVEKRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRMALYG 232
            G EG   GTG  K   +R+A A+   A N+ R    PP+   +EVT AEA  L ARWD++MD +LR GVLRYG  WEEVSTHMAPH CPK+EVEKRW MVK N VKGPW+ EED+LLK+LV EYG+++WS+IA QFPGR+GKQCRERWLNH+D  VK  AWT AED+ LCEAQ RLGNKW+ ISK LPGRAENA+KNRFNS+ TKR+A  G
Sbjct:   28 GGEGTASGTG-GKAAAERKAAARAWEANNKRRSIPLPPVGPGIEVTAAEAMILGARWDREMDEMLREGVLRYGADWEEVSTHMAPHECPKEEVEKRWQMVKANPVKGPWSPEEDSLLKVLVDEYGRKKWSLIATQFPGRSGKQCRERWLNHLDTRVKKSAWTGAEDMKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLASQG 237          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: A0A835Z962_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z962_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.510e-51
Identity = 90/169 (53.25%), Postives = 113/169 (66.86%), Query Frame = 0
Query:   73 FLNARWDKDMDTLLRVGVLRYG-GAWEEVSTHMAPHGCPKDEVE-----KRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRMALYGGLN 235
             LNA+W KDMD  LR GVLRYG   W +V  HM       ++VE     +RW ++ +  VKGPWA EED +L+ LV +YG ++WS +A   PGRTGKQCRERWLNH+D  V   +WT  ED +L +AQ  LGN+W+ IS+ LPGRAENA+KNRFNSL TKR      +N
Sbjct:    1 MLNAKWTKDMDDTLREGVLRYGMSEWPKVMAHMQVQSHVLEDVESLECHQRWQIICDLPVKGPWASEEDDVLRALVKQYGNKKWSHVATGLPGRTGKQCRERWLNHLDIRVMKTSWTPEEDELLFDAQRELGNQWSKISRMLPGRAENAVKNRFNSLITKRRGYRTKVN 169          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: F0YHL4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHL4_AURAN)

HSP 1 Score: 183 bits (465), Expect = 2.030e-51
Identity = 89/159 (55.97%), Postives = 114/159 (71.70%), Query Frame = 0
Query:   78 WDKDMDTLLRVGVLRYG-GAWEEVSTHMAP--HGCPKD----EVEKRWH-MVKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRM 228
            W ++ D +LR GVLR+G  AWE+VS H+ P   G P+     E E RW  +V++  VKGPW  EED+LL+ LV ++G +RW++IA   PGR GKQCRERWLNH+D  V    WT  ED VL EAQ+R+GNKW+ I++ LPGRAENA+KNRFNSL TKR+
Sbjct:    1 WTEEEDAVLREGVLRFGTSAWEDVSRHLLPPVQGGPQKRQAPECEARWEAVVRHTAVKGPWLPEEDSLLRQLVNKFGPKRWALIASHIPGRAGKQCRERWLNHLDTRVIKSDWTPDEDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKRL 159          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: W7TQR3_9STRA (Myb-related protein a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQR3_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.250e-46
Identity = 85/153 (55.56%), Postives = 106/153 (69.28%), Query Frame = 0
Query:   78 WDKDMDTLLRVGVLRYG-GAWEEVSTHMAPHGCPKDEVEKRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKR--RWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKR 227
            W  + D LLR  +LR G   W  ++ HM P     DE   RW  +K+  VKGPW++EED LL+LLV  YG R  +WS++A   PGR GKQCRERWLNH+D +VK G W   ED +LC+AQ RLGNKW+ I+K LPGRAEN++KNRFNSL T+R
Sbjct:  149 WTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRR 301          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: A0A7S2WV82_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV82_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.220e-46
Identity = 88/170 (51.76%), Postives = 118/170 (69.41%), Query Frame = 0
Query:   64 VEVTLAEADFLNARWDKDMDTLLRVGVLRYGGA-WEEVSTHMAPHGCPK--DEVEKRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRMAL 230
            V     +A  +   W ++ D +LR  VLR+G + W  VS+HM P  C +  D+ E RW +VKNN VKGPW  EED LL+ LV ++G ++WS IA + PGR GKQCRERWLNH+D +VK   WT  ED +L EAQ R+GN+W+ I++ LPGRAENA+KNR+NSL TK++ +
Sbjct:  123 VHAVPGQAPAVQQAWGEEEDAVLREAVLRFGVSNWPAVSSHMLP-SCHRSADQCEIRWRVVKNNPVKGPWLPEEDQLLRDLVGQFGPKQWSKIAEKIPGRAGKQCRERWLNHLDSSVKKSDWTPEEDKILLEAQRRVGNRWSEIARMLPGRAENAVKNRYNSLITKKLTM 291          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: A0A8J2SUI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUI4_9STRA)

HSP 1 Score: 179 bits (453), Expect = 5.020e-45
Identity = 92/190 (48.42%), Postives = 126/190 (66.32%), Query Frame = 0
Query:   78 WDKDMDTLLRVGVLRYG-GAWEEVSTHMAP--HGCPK----DEVEKRWHM-VKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRMALYGGLNSTKPGHNFNEGEERAEHDTSELKR 259
            W ++ D +LR GVLR+G G W +V+ H+ P  +G P+    D+ + RW   V++  VKGPW  EED LL+ LV ++G +RW++IA   PGR GKQCRERWLNH+D  V    WT  ED +L +AQ+R+GNKW+ I++ LPGRAENA+KNRFNSL TKR+    GL + +      + E R E D +E +R
Sbjct:   60 WTEEEDAVLREGVLRFGTGDWSKVARHLLPPINGGPQKRTPDDCQARWDAAVRHAAVKGPWLPEEDNLLRQLVAKFGPKRWALIASHIPGRAGKQCRERWLNHLDSRVVKSDWTPDEDAILLDAQQRVGNKWSEIARGLPGRAENAVKNRFNSLITKRLTH--GLEA-QARRRDRQSESRGEADAAEARR 246          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: A0A6H5KU69_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU69_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.180e-44
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0
Query:  120 MVKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRMALYG 232
            MVK N VKGPW+ EED+LLK+LV EYG+++WS+IA QFPGR+GKQCRERWLNH+D  VK  AWT AEDV LCEAQ RLGNKW+ ISK LPGRAENA+KNRFNS+ TKR+A  G
Sbjct:    1 MVKANPVKGPWSPEEDSLLKVLVDEYGRKKWSLIATQFPGRSGKQCRERWLNHLDTRVKKSAWTGAEDVKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLASQG 113          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.350e-42
Identity = 82/156 (52.56%), Postives = 105/156 (67.31%), Query Frame = 0
Query:   78 WDKDMDTLLRVGVLRYGGA--WEEVSTHMA--PHGCPKDEVEKRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRMA 229
            W +D D +LR  VLR      W +++T +          E  +RW+ VK   VKGPW+ EED  LK LV E+G ++W+++A  FPGR+GKQCRERW NHVD  VK G W+A ED +LCEAQ +LGNKW+ +SK L GR+ENAIKNRFNSL  K +A
Sbjct:   12 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWNYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLA 167          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: K8YTL3_NANGC (V-myb myeloblastosis viral oncogene-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTL3_NANGC)

HSP 1 Score: 171 bits (434), Expect = 7.730e-42
Identity = 79/141 (56.03%), Postives = 99/141 (70.21%), Query Frame = 0
Query:   90 VLRYG-GAWEEVSTHMAPHGCPKDEVEKRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKR--RWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKR 227
            +LR G   W  ++ HM P     DE   RW  +K+  VKGPW++EED LL+ LV  YG R  +WS++A   PGR GKQCRERWLNH+D +VK G W   ED +LC+AQ RLGNKW+ I+K LPGRAEN++KNRFNSL T+R
Sbjct:   32 ILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQQLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRR 172          
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Match: A0A6A7FZ39_9CRUS (Myb-related protein B isoform X2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FZ39_9CRUS)

HSP 1 Score: 152 bits (384), Expect = 4.670e-39
Identity = 78/180 (43.33%), Postives = 107/180 (59.44%), Query Frame = 0
Query:   62 DRVEVTLAEADFLN-ARWDKDMDTLLRVGVLRYGGAWEEVSTHMAPHGCPKDEVEKRWHMVKNNR-VKGPWALEEDTLLKLLVTEYGKRRWSVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNKWASISKFLPGRAENAIKNRFNSLRTKRM-----ALYGGL 234
            D    +LA    LN  RW KD D  L+  V   G  W+ ++ H       + + ++RW  V N   VKGPW  EED ++  LV +YG +RW++IA Q  GR GKQCRERW NH++PN+K  AWT  ED V+ EA ++ GN+WA I+K +PGR +NAIKN +NS   ++      A  GG+
Sbjct:   28 DSASSSLALKKHLNKGRWTKDEDEKLKCVVESEGEQWDAIANHFPDRS--ELQCQQRWQKVVNPELVKGPWTKEEDEMVVNLVDKYGAKRWTLIAKQLKGRIGKQCRERWHNHLNPNIKKSAWTPEEDGVIYEAHKQWGNQWAKIAKLIPGRTDNAIKNHWNSTMRRKYEAEMSATLGGM 205          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1084.15.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKP8_ECTSI8.970e-7965.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z962_9STRA1.510e-5153.25Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
F0YHL4_AURAN2.030e-5155.97Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W7TQR3_9STRA1.250e-4655.56Myb-related protein a n=1 Tax=Nannochloropsis gadi... [more]
A0A7S2WV82_9STRA2.220e-4651.76Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A8J2SUI4_9STRA5.020e-4548.42Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5KU69_9PHAE1.180e-4473.45MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZ02_ECTSI1.350e-4252.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K8YTL3_NANGC7.730e-4256.03V-myb myeloblastosis viral oncogene-like protein n... [more]
A0A6A7FZ39_9CRUS4.670e-3943.33Myb-related protein B isoform X2 (Fragment) n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 74..124
e-value: 3.9
score: 12.9
coord: 126..175
e-value: 5.6E-15
score: 65.8
coord: 178..226
e-value: 2.7E-9
score: 46.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 174..224
score: 8.977793
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 122..173
score: 11.834444
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 181..223
e-value: 4.49617E-8
score: 47.5702
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 129..173
e-value: 2.85737E-14
score: 65.2894
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 127..172
e-value: 1.5E-14
score: 53.9
coord: 179..223
e-value: 4.6E-11
score: 42.7
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 122..177
score: 25.146574
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 178..228
score: 16.690435
NoneNo IPR availableGENE3D1.10.10.60coord: 126..178
e-value: 4.5E-21
score: 76.5
NoneNo IPR availableGENE3D1.10.10.60coord: 180..258
e-value: 5.5E-15
score: 57.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..378
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 114..438
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 124..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1084contigA-nodosum_M_contig1084:142210..155433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1084.15.3mRNA_A-nodosum_M_contig1084.15.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1084 139626..156988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1084.15.3 ID=prot_A-nodosum_M_contig1084.15.3|Name=mRNA_A-nodosum_M_contig1084.15.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=602bp
MKRSRPSSRKLKALPTGQGTCLGVEGLTFGTGVTKGTVQRRAEAKVSGAC
NRPRPSRPPMADRVEVTLAEADFLNARWDKDMDTLLRVGVLRYGGAWEEV
STHMAPHGCPKDEVEKRWHMVKNNRVKGPWALEEDTLLKLLVTEYGKRRW
SVIAGQFPGRTGKQCRERWLNHVDPNVKTGAWTAAEDVVLCEAQERLGNK
WASISKFLPGRAENAIKNRFNSLRTKRMALYGGLNSTKPGHNFNEGEERA
EHDTSELKRRAPIGFESVEAIPRDLSEDDGVTPAFIGDEGYRSLLGFSYG
GPDQKSNIFGHPCNKIGEGVDDAKFLQSFFDLLEHHPMSPPACKRRRRNA
PSETSPKAMDESRNRIQIEVKDKEGGGGAVGPEGEAMGDITTAGLDHHPF
RLEDVIPTPLEIGSFGGGPEDITSMSSLGSYLTPLESRSVGSGQSSVAQT
SCRPSLGGGKYAHSTSEPSPSYWRRGLHEANGTPPLSEGRTARVSPNLDS
SDGGAKRRGAVDVISSDEQNFDDCVSPYPMSTNSATLRLATQGIPTAPVM
REQEHMAAAKGYGAEASFEYFRETSFLSSPLVGGAGEGPRTSANFSSGGF
I*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf