prot_A-nodosum_M_contig1081.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1081.14.1
Unique Nameprot_A-nodosum_M_contig1081.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length787
Homology
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BLAST of mRNA_A-nodosum_M_contig1081.14.1 vs. uniprot
Match: A0A6H5KNC7_9PHAE (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC7_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.630e-11
Identity = 57/120 (47.50%), Postives = 71/120 (59.17%), Query Frame = 0 
Query:  668 KTAIARERQAAAAKDLERSE----------------------------------VEEMERRTARRKAEIQRILSESREHSKRELQRLQALYVEKMRAEAALVRGSRAERDASMMTAGRLM 753
            + A+A+ERQAAAAKDLERSE                                  VEEMERRTARR+AE+QR+LSESR+ SK EL RL+A++ ++MRA+ ALV G RAE D  +  AG  M
Sbjct:  583 EAAVAKERQAAAAKDLERSEDMRRMLEAEVLGLRTKLNEPSTPSQAKYMNLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFM 702
[Close]
BLAST of mRNA_A-nodosum_M_contig1081.14.1 vs. uniprot
Match: D8LRE4_ECTSI (Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE4_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 4.360e-11
Identity = 57/118 (48.31%), Postives = 69/118 (58.47%), Query Frame = 0 
Query:  672 ARERQAAAAKDLERSE----------------------------------VEEMERRTARRKAEIQRILSESREHSKRELQRLQALYVEKMRAEAALVRGSRAERDASMMTAGRLMEG 755
            A+ERQAAAAKDLERSE                                  VEEMERRTARR+AE+QR+LSESR+ SK EL RL+A++ ++MRA+ ALV G RAE D  +  AG  M G
Sbjct:  355 AKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMGG 472
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1081.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNC7_9PHAE1.630e-1147.50Centrosomal protein of 162 kDa (Fragment) n=1 Tax=... [more]
D8LRE4_ECTSI4.360e-1148.31Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 639..675
NoneNo IPR availableCOILSCoilCoilcoord: 688..708
NoneNo IPR availableCOILSCoilCoilcoord: 369..399
NoneNo IPR availableCOILSCoilCoilcoord: 312..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..574
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..776
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 634..662

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1081contigA-nodosum_M_contig1081:187504..200409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1081.14.1mRNA_A-nodosum_M_contig1081.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1081 187205..200465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1081.14.1 ID=prot_A-nodosum_M_contig1081.14.1|Name=mRNA_A-nodosum_M_contig1081.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=787bp
MKKGADQTRRKTRAGTSARPSGGSDFPSPSSPFSRRYEDSHRESRRRVSG
GTIACELGAGGGDEKEEDAYDFLASRSSRTRSATGAAPVSIAGGGGGGVG
GSGKGDTSSPAGGSGARAGDGAGTFSNFAKSLREFQGDLDLRAATTGEAI
SETAERGPRENEVEAVGGEAWKVLRRGGTEETGDVNVEGRCEGADVRESS
GPLRFQGASTNSSTADAVDDGGEGERGERARGFPSGAEASIVGATSPLYL
LASVAVSGLVRPTSPGGRSALSLPPAPPDSPPPSPLPSAFVAFAAAGVPA
AEDKQSTGGHTAENERRARFQAEAELVEARARQADLTLEVDRLRTVEKSL
EARAAQAAAALGVTMKKPVELLDRNLEKIREQEKELDRLRRALSSRKAGG
KGAVGRSPSDVRKIKGRVVEELEKELDRIRSSYTRGLKGMEREAENQIRA
LKRGGSGRGGGGGDSNRLGAEDGRSVHGRDDDNEAARMTRRDEADGQLRQ
PGGKREHQSSATTTAAAATGGRVGIHGARSSPPPFAGRLGGNGIAASSSA
AFGSPSAPAASSPPVRQTASSSGENRRVRFRDPREAVRHRQDVRLVQTAQ
ALGKAQAREQAELWGRGRAKLSVDGCNASADTRGRGEDLAEVEARARERE
RHQQQQQQQEKARELELKTAIARERQAAAAKDLERSEVEEMERRTARRKA
EIQRILSESREHSKRELQRLQALYVEKMRAEAALVRGSRAERDASMMTAG
RLMEGGSSGGKAERIATDRPIESAADRTKPAWGMVW*
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