prot_A-nodosum_M_contig108.13.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig108.13.2
Unique Nameprot_A-nodosum_M_contig108.13.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1026
Homology
BLAST of mRNA_A-nodosum_M_contig108.13.2 vs. uniprot
Match: D7G7N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N8_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 8.940e-54
Identity = 347/1160 (29.91%), Postives = 500/1160 (43.10%), Query Frame = 0
Query:    1 MWKVWKKQDEGPPTLPPGTPNEVKEGLATISTNAFERQVRSVLISMNERGEGEDEGDGPN---------LDPPSSFPVEAVHQVTDWTGLGCERKIGDAQWLDVGSDTISMLVRPIVASRGRARDVP---GDVFVSISADVISTSTKATVGTRSLRVDVPFSQCSALHRLALEPPRDHSGNGSCILSIRIGGGARVFTRLRQALAVLAAKATK-----KPGDQLKSPPAKVSI---------NVLTSPSGKRQKISEEAETPLV--------------------SHPTPRK--RAKIDRGSGVIASQRGAGSHQAVFKR------NSPTKASMVTPTMSANDETLRSSSNDTAAATDQKK----TPSAGQ-QVPAKKIAVTGSNIQVPATVRAMVRGGGPADKARNDRRFGKVHKNIRSIAEGNADPDAVETTVDGRVGETESENDSWMESRCRLELAPSSMPSSGRRKMNSGGDKDQSRAKMPRGIGQGGIGAAIKSFKERTRTAIRKPET-WDADETWRMEDEDDCVG------YVEETPRKNLTQQSRSKPGTQQHPRQQRGGGIGERKGTPSTKDSTGASSVRAAAGLSSSRRGRTKSTTVCASRPGEA---AGDSR--WQAASEPKAKGANQLWGGTASKGNAKKTAAKTKGESDG-----------------------------DSSTAVPSR--RERLPRRDASAGVSTTAVPVTTELPSSSDEAVFSEEDEWASSKEGKSSGDDVIEQTAEEESGAENDGVGGDVKLRGHESALSESEGVGSEDEDGKAQDDVETSEERARAGAGVVPVTGGQGHSISKESSELKETSRQGQQRE------DQDEQAIGSQDESEEDVEEARGDSNGDCADDEELTEQSTPPGVATATVQRERKRGKACAQTATGGRFAGGDEGGEEMXXXXXXXXXXXXXXXXXXX-----ESEDNY-----------------------SVMIAKICKQMISHARARDLRVKKRKTDAAIEDARQECRDYLERTSQTVTGYWRQQAEDLVERGLQAEDAVAAARERVRALAVEHEEQWQASMDRVQKHATALKRLDNQIRSGRGTFES-KLKIAWQADVEALKLNLQKHREETVASFSSTLASLEKKAKSG-GEAVDSSSIPSLLSRLTM 1022
            +WKVWKKQ  GPP LPP T  E+ EG ++I+ + FE Q R++L ++N R  G+D  DG           L PPSSFPVEA+ QVT+W GLG   ++G+A  LD+G D+IS+ V P  AS G+        G VF+SI A+ ++ ++K  VG RSL+VDV  S+C AL RL   PP +++   +C + I++ GG+++F+R RQA+A L +K        KP    KS     ++         + L    G  + + ++ E                        S  TPRK  R   DRG     + R   S     KR      N+PT + +  P  +A   T  +SS +    TD  K    TP+AG  +  A+  AVT  +  + A                            R  +EG++   +     D      +   DSWM  R  L+LAP+S  ++ +RK      K  SR +     G G + AA    K    +++R   T WD  E     DE  C         +EE   ++                      +   K TPS   S                                     G  R  W    + K   ++   G            A  +G SD                              DS     +R  R R  RR+A++       P                    ++ +                       G  G  K   H++ +  +   GS +ED +A+   E  + RA    G    + G   S+S++S         G   +      ++DE    S  +  E+++EA   ++ DC+D EELTE+ST  G A  T  R+   G   A+T    R           XXXXXXXXXXXXXXXXXXX      S+++Y                       S+++A+I KQ+++ ++AR  R+KKRKTD+A+E  R ECRDY+E  SQ V+ +WR+QA+DL+E+G QAE+ V AARE VR L ++HE+Q QA+ DRV+K A+ LK L++    G G   + KL+ AW  +   L+  LQKHRE  VA FS TL+S +K  K G G   DS+SI SLLS LTM
Sbjct:  108 LWKVWKKQRGGPPQLPPSTRREIAEGFSSITIDDFEGQTRAMLAAVNSRPNGDDGEDGEYDPEEDEKGWLSPPSSFPVEALLQVTEWRGLGLRDRLGEAHHLDIGGDSISIQVYP-KASPGKTSGTSTGGGGVFISIPAETVAAASKVLVGARSLQVDVSLSECPALARLVRTPPEENAATANCTIIIQLEGGSQMFSRFRQAIAALKSKVPDVAKEAKPSRGSKSTKGSSALEHAEVFKPSDELEGAEGVEEDLDDDDEEGTQTNHRKRPRAVCGLAGSVSNRSRITPRKDGRRDSDRGGEDQTASREKASSGRKAKRAHRAPLNTPTDSPVSAPAAAARVNTSTASSAEKKRITDHAKGEVPTPAAGSFRRIAQGAAVTAHDSSLQA----------------------------RESSEGSSR--SFSDDADATAARDDDGGDSWMAPRRHLDLAPAS--ATAKRKDKQARTKTGSRNRD----GSGKVRAA----KGDGGSSLRGGSTEWDISED-DGGDEGHCEKGSAGRHRLEEVTPRSKAXXXXXXXXXXXXXXXXXSSVLSGSKNTPSPPASVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGRHRRLWGLDEDQKQHASSSKQGEELGISTLSVVVASAEGRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLNVGAARGGRNRPSRREAASRALKALSPPXXXXXXXXXXXXXXXXXXXSNRQRPH--------------------GNAGGRKGSSHQTTVPAA-ATGSREED-RAEKSSEQRKLRAHVQVGEAAGSVG---SLSQQSFFSFGGDEDGGDNDNDAEYVEEDEGGAESDKDGSEELDEAASPTS-DCSD-EELTERSTSGGGAAPTRGRQ---GAVPAKTDRRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSDNDYNLEEDDIEEAVEGGEDEDGGEEDSLILAQIYKQLVAASQARTKRIKKRKTDSAVEATRAECRDYVESVSQAVSEHWRRQAQDLLEQGRQAEEDVVAAREVVRVLTLQHEDQRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLGEGVELQQKLQKHRESAVARFSVTLSSNKKANKGGRGGGGDSTSIASLLSHLTM 1195          
BLAST of mRNA_A-nodosum_M_contig108.13.2 vs. uniprot
Match: A0A6H5LAM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAM6_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 5.590e-41
Identity = 91/208 (43.75%), Postives = 131/208 (62.98%), Query Frame = 0
Query:    3 KVWKKQDEGPPTLPPGTPNEVKEGLATISTNAFERQVRSVLISMNERGEGED---------EGDGPNLDPPSSFPVEAVHQVTDWTGLGCERKIGDAQWLDVGSDTISMLVRPIVASRGRARDVP---GDVFVSISADVISTSTKATVGTRSLRVDVPFSQCSALHRLALEPPRDHSGNGSCILSIRIGGGARVFTRLRQALAVLAAK 198
            KVWKKQ  GPP L P T  E+ EG ++I+ + FE Q R++L ++N R    D         EG+   L PPSSFPVEA+ QVT+W GLG   ++G+A  LD+G D+IS+ V P  AS G++       G VF+SI A+ ++ ++K  VG RSL+VDV  S+C AL RL   PP +++   +C + I++ GG+++F R RQA+A L +K
Sbjct:  130 KVWKKQRGGPPQLLPSTRREIAEGFSSITIDDFEGQTRAMLAAVNSRPNKNDDDDAEYDPQEGEKGWLSPPSSFPVEALLQVTEWRGLGLRDRLGEAHHLDIGGDSISIQVYP-KASPGKSSGTSTGGGGVFISIPAETVAAASKVLVGARSLQVDVSLSECPALARLVRTPPEENAATANCTVIIQLEGGSQMFNRFRQAIAALKSK 336          
BLAST of mRNA_A-nodosum_M_contig108.13.2 vs. uniprot
Match: A0A6H5L3H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H8_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 4.110e-16
Identity = 65/143 (45.45%), Postives = 87/143 (60.84%), Query Frame = 0
Query:  860 ARDLRVKKRKTDAAIEDARQECRDYLERT--SQTVTGYWR-----------QQAEDLVERGLQAEDAVAAARERVRALAVEHEEQWQASMDRVQKHATALKRLDNQIRSGRGTFES-KLKIAWQADVEALKLNLQKHREETVA 988
            AR  R+KKRKTD+A+E  R+ECRDY+ER   S      ++           Q A+DL+E+G QAE+ V AARE VR L ++HEEQ QA+ DRV+K A+ LK L++    G G   + KL+ AW  +   L+  LQ HRE  VA
Sbjct:  573 ARTKRIKKRKTDSAVEATREECRDYVERDGGSNRFDDCYKARSTLPRLQETQSAQDLLEQGRQAEEDVVAAREAVRVLTLQHEEQRQAARDRVEKLASTLKGLESYFGPGPGASSTTKLENAWLGEGVELQQKLQNHRESAVA 715          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.13.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7N8_ECTSI8.940e-5429.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LAM6_9PHAE5.590e-4143.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3H8_9PHAE4.110e-1645.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 965..985
NoneNo IPR availableCOILSCoilCoilcoord: 860..887
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..841
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 748..762
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 635..652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 687..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 814..834
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig108contigA-nodosum_M_contig108:115106..124731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig108.13.2mRNA_A-nodosum_M_contig108.13.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig108 113898..125319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig108.13.2 ID=prot_A-nodosum_M_contig108.13.2|Name=mRNA_A-nodosum_M_contig108.13.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1026bp
MWKVWKKQDEGPPTLPPGTPNEVKEGLATISTNAFERQVRSVLISMNERG
EGEDEGDGPNLDPPSSFPVEAVHQVTDWTGLGCERKIGDAQWLDVGSDTI
SMLVRPIVASRGRARDVPGDVFVSISADVISTSTKATVGTRSLRVDVPFS
QCSALHRLALEPPRDHSGNGSCILSIRIGGGARVFTRLRQALAVLAAKAT
KKPGDQLKSPPAKVSINVLTSPSGKRQKISEEAETPLVSHPTPRKRAKID
RGSGVIASQRGAGSHQAVFKRNSPTKASMVTPTMSANDETLRSSSNDTAA
ATDQKKTPSAGQQVPAKKIAVTGSNIQVPATVRAMVRGGGPADKARNDRR
FGKVHKNIRSIAEGNADPDAVETTVDGRVGETESENDSWMESRCRLELAP
SSMPSSGRRKMNSGGDKDQSRAKMPRGIGQGGIGAAIKSFKERTRTAIRK
PETWDADETWRMEDEDDCVGYVEETPRKNLTQQSRSKPGTQQHPRQQRGG
GIGERKGTPSTKDSTGASSVRAAAGLSSSRRGRTKSTTVCASRPGEAAGD
SRWQAASEPKAKGANQLWGGTASKGNAKKTAAKTKGESDGDSSTAVPSRR
ERLPRRDASAGVSTTAVPVTTELPSSSDEAVFSEEDEWASSKEGKSSGDD
VIEQTAEEESGAENDGVGGDVKLRGHESALSESEGVGSEDEDGKAQDDVE
TSEERARAGAGVVPVTGGQGHSISKESSELKETSRQGQQREDQDEQAIGS
QDESEEDVEEARGDSNGDCADDEELTEQSTPPGVATATVQRERKRGKACA
QTATGGRFAGGDEGGEEMEEELDEIDENDGDSGNRGDESEDNYSVMIAKI
CKQMISHARARDLRVKKRKTDAAIEDARQECRDYLERTSQTVTGYWRQQA
EDLVERGLQAEDAVAAARERVRALAVEHEEQWQASMDRVQKHATALKRLD
NQIRSGRGTFESKLKIAWQADVEALKLNLQKHREETVASFSSTLASLEKK
AKSGGEAVDSSSIPSLLSRLTMRTS*
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