prot_A-nodosum_M_contig1073.21.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1073.21.2
Unique Nameprot_A-nodosum_M_contig1073.21.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1308
Homology
BLAST of mRNA_A-nodosum_M_contig1073.21.2 vs. uniprot
Match: A0A6H5JM50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM50_9PHAE)

HSP 1 Score: 695 bits (1793), Expect = 1.040e-223
Identity = 536/1427 (37.56%), Postives = 681/1427 (47.72%), Query Frame = 0
Query:   36 HQTKLHVKTDELMRPPEARSGNGC-----PLSSDVAIIGLAEEGENRRRGPKERCVHWDRVEIDGKDTALEQANTTS--------------------TAPLMPKSAPLP-LRVERTTCDMCLSAFESSSVSSTVTIRKRVLKARREWGVPGSEGRRFLSASYLYEPARLCVSCSQFFLFKK---RSHGRELELDVDGVGRTKERASLTLESVVSKEPMD--------KAKARSASTLPDCPLTG-------KRRQLRGTQPDEPDEH----------------------NGGNYRLDDLIEDDGCLVIEENDLARLPGAIATQSSTTDHMGADVCVGL-----------WGTHLSRVGERPGDHCPVAIKAQPTTREHGNPAPVKTITPLSIPANTAGTRHGIFLYPARAKHGTAAGDRLSTDNSNEERPTSGASTVVITAAF--TRICSRTRRESHPWWEVDLGGVFPVRCIRVTHPDRRTEAAETEAQAVVDIAPFWIMTSAGPIGQATPEEARELALESKRWGSHGKVTVWDLGFNRFATGVRIQAEGIKSLQLHRVEIIKGGGTQQARDAIQHRLVDREPSTFLLHG-DSAGIFSCCPQSSATSIALTAAPDVTATPNRSKIRRVSEDTTTLRRLQHFSQEKCRDATTRQTCFAPASSRAVAESGMLISAGGDQRTGSPATTFEEPERTKPLTSRTIAYSGPDLGREN------------------------------GESSALRPRSCPVNGVGSPLGLRSGGNGSRRATSSGYSRRRRKLWMGGKEDVRGLFLRAVVGYDWVDDFNEQEMRVRGSFTDVDVAVLEEIFLRCALGDDVTARGAISPTNPSLQLDPEEVCGNLRRLQLQLQTKGRGGNKSKTPMLLAVRDSPNLFKVRLFTSRVVVESLPDALARAGAQLFATTGRPLRFDWNRFLGVMGLCLQVASRGAGQTLAASAVAHLFEETRSDKLDFLTRKRSHVSQPAAHEVVSVGKATHHEQGRG---------GDGIVSGVDLSSRAAIAPSALSASGSWTSTQSSVDWGATGEVLSRRRGRAAASPAPAEVNIFNEAGFIETGEESSFDAESEPTESSTNTAHLQEHYKVKRGGGP-----------PRWGGRN-------TVLNSLLRPVAKHEVSLGYGEAVSQRRQXXXXXXXXXXXXXXXXTRAYKPCGLCRVLFPVESLAAGTTANLKALRAFLAAVGSPSVERLERKASASPCGGGLLRVPLCVFCAQFFDPDSPGGIVSPDGYRSHGSGKGRGGHRGGR---------EEDIIKRRWISANTAAANGLIPFFDDRFPDGLSDTPPPPSSAPADYAVMGT----SLRFRPIESACLDGARLPCRSFRGFEADSIGSK-----------GGVHHHREAKELRAVGRLVRGGCSIRDRL 1301
            H  KL   ++ LM  P             P + + +  GL EE  NR RG KERCVHWDRVEI+G++  L++A+T+S                    T+ L    A    L V  +TCDMCL  FE+SSVS  +T+ KR+L+ RR+WG+ G + +++ +AS LYEPARLC  CSQFF  K+   R  G   EL   GVGR+ E  SL+LE++ S +P+         K   +SA        +G       +RR + G                               +  N+RLD+LI DD   V++E DLAR  GA+A+QSST D MGA+VC G            WGT        P    P A+   P+  E    + V   TP++  A+           P   +  ++A        S            V  AA    R CSRTRRE+ PWWE+DLGG FPVRCIRV HPDRRTEA +  A   VD++PFWIMTSAG +G A PEEA++LA+ SKR GSHGKVTVW+LG N FA  VR+QAEG+KSLQL RVE+IKGGGTQQA+DA+Q +L  R  S +L H     G+FS            +AA   TAT            TT L +                            ++            G    TF+         S+ + +   D G                                 G    +RP++C     G+                     R   L     EDVR L LRA+VGYDWVD+FN ++ RVRG+FT+ DV VLEEIF RCA GD+  AR   + ++ SL+LDP ++CG+LRRLQLQ+QT    G K KTPMLLAVR+SPNLF++    S  V+E+LPDALARA A+L     RPL  DWNRFLGVMGLCL+    G G  LAASAVA LFEE   DKL+FLTR+R+ +      + V VG      + RG          DG + GV   +       A + SG+         + A                          A        S      E T ++T +A+        R GGP             WG R+         L SLLRP A+HEV  GYGEAV +RR+                TRAYKPCGLC+  FPVESL  G+T +LK L  FLA  G+PS ER +RKAS       L R+PLCVFC QFFDPD PGG++ P    +   G GR   +G           E  ++        T  ANGL+PFFDDRFP+  S+ PPP SSAPA  A   +    SL  RP ++ C   +        G    S               G   H  EA ELR +GRLVR GCSIRDRL
Sbjct:   42 HHLKLLALSEVLMCSPVPNEAGKVKKKEVPSTMNGSSTGLLEEARNRWRGRKERCVHWDRVEINGREFPLQRADTSSITQQATTTSGGLIGGTGQSNTSKLAADKAQASYLLVGHSTCDMCLMEFEASSVSGVITM-KRILETRRDWGLVGEKSKKYAAASNLYEPARLCALCSQFFCSKEADGRVGGEGGELVACGVGRSDEHVSLSLENMASNKPLPDKGTSALAKMATKSAGGCSASAGSGVRPSQHRRRRDVSGXXXXXXXXXXXXXXXXXXNRKEARSLKSAATSAANFRLDELIADDR-FVVKETDLARQVGAVASQSSTADGMGANVCRGFAAANRRGEAEGWGTSAGTPSRSPN---PAALINFPSEGESLLDSSVGDPTPVTPTASAXXXXXXXTALPVVQQTLSSARSTRPQKRSPPLPAPKMCPDEVAAAAXXXARTCSRTRRENQPWWEIDLGGAFPVRCIRVHHPDRRTEATKAGASPFVDVSPFWIMTSAGAMGDAAPEEAKQLAISSKRVGSHGKVTVWNLGVNHFAAAVRVQAEGVKSLQLARVEVIKGGGTQQAKDAMQRQLAARTDSNYLPHHRQHHGMFSDA----------SAAQGSTAT-----------STTRLAKQNTIGGXXXXXXXXXXXXXXX-----XXDNXXXXXXXNGNYNGRGLKTFK---------SKILHFYHQDRGXXXXXXXXXXXXXXXXXXXXXXXPRAEVAATAAGGLGHIRPKTCSAVAAGARXXXXXXXXXXXXXXXXXXXXRAEGL---PGEDVRRLLLRAMVGYDWVDEFNGKDERVRGAFTEQDVVVLEEIFFRCAFGDNTDARATATVSDQSLRLDPGDLCGDLRRLQLQMQTNP--GGKGKTPMLLAVRESPNLFQL---LSSGVIEALPDALARAEARL-PQAQRPLGLDWNRFLGVMGLCLESVYGGTG-LLAASAVARLFEEKTDDKLEFLTRRRNRLPP---RDTVKVGARQQKGKYRGFESAPAVVGADGSI-GVTEGTPGGATKGAKAGSGTXXXXXXXXSYSAEDXXXXXXXXXXXXXXXXXXXXXXXGA--------SRGSRRREGTPATTTSANGHGGAVASRPGGPVVVGIGGGYGDADWGNRSKRRGGGAAALKSLLRPQARHEVVRGYGEAVCKRRERQREALKRALEPDVEPTRAYKPCGLCQAPFPVESL--GSTVSLKVLATFLAMAGAPS-ERFDRKASGL---SALHRLPLCVFCGQFFDPDFPGGVIPPTRNATLTRGGGRRRLKGDASLSSSSSSLESSLLLFSPSLRATVEANGLVPFFDDRFPERWSEAPPP-SSAPAGRASSPSPPSLSLPSRPFDALCSSSSATGQHKGHGSAPSSAXXXXXXXXXXXXXAGDKQHVGEATELREIGRLVRRGCSIRDRL 1399          
BLAST of mRNA_A-nodosum_M_contig1073.21.2 vs. uniprot
Match: D7FPB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB5_ECTSI)

HSP 1 Score: 493 bits (1270), Expect = 3.670e-154
Identity = 379/967 (39.19%), Postives = 458/967 (47.36%), Query Frame = 0
Query:  395 VVITAAFTRICSRTRRESHPWWEVDLGGVFPVRCIRVTHPDRRTEAAETEAQAVVDIAPFWIMTSAGPIGQATPEEARELALESKRWGSHGKVTVWDLGFNRFATGVRIQAEGIKSLQLHRVEIIKGGGTQQARDAIQHRLVDREPSTFLLHGDSAGIFSCCPQSSATSIALTAAPDVTATPNRSKIRRVSEDTTTLRRLQHFSQEKCRDATTRQTCFAPASSRAVAESGMLISAGGDQRTGSPATTFEEPERTKPLTSRTIAYSGPDLGRENGESSALRPRSCPVNGVGSPLGLRSGGNGSRRATSSGYSRRRRKLWMGGKEDVRGLFLRAVVGYDWVDDFNEQEMRVRGSFTDVDVAVLEEIFLRCALGDDVTARGAISPTNPSLQLDPEEVCGNLRRLQLQLQTKGRGGNKSKTPMLLAVRDSPNLFKVRLFTSRVVVESLPDALARAGAQLFATTGRPLRFDWNRFLGVMGLCLQVASRGAGQTLAASAVAHLFEETRSDKLDFLTRKRSHVSQPAAHEVVSVGKATHHEQGRGGDGIVSGVDLSSRAAIA------PSALSASGSWTSTQSSVDWGATGEVLSRRRGRAAASPAPAEVNIFNEAGF-IETGEESSFDA----------ESEPTESSTNTAHLQEHYKVKRGGG------------------PPRWGGRNTVLNSLLRPVAKHEVSLGYGEAVSQRRQXXXXXXXXXXXXXXXXTRAYKPCGLCRVLFPVESLAAGTTANLKALRAFLAAVGSPSVERLERKASASPCGGGLLRVPLCVFCAQFFDPDSPGGIVSPDGYRSHGSGKGRGGHRG---------GREEDIIKRRWISANTAAANGLIPFFDDRFPDGLSDTPPPPSSAPADYAVM----GTSLRFRPIESACLDGARLPCRSFRGFEADSIGSKGGV------------HHHREAKELRAVGRLVRGGCSIRDRL 1301
                AA  R CSRTRRE+ PWWE+DLGG FPVRCIRV HPDRRTEA +  A   VD++PFWIMTSAG IG A PEEA++LA+ SKR GSHGKVTVW+LG N FA  VR+QAEG+KSLQL RVE+IKGGGTQQA+DA+QH+L  R  S +L H                                                QH +               P+SS   AE  +  +A G                T+P T   +A            SS++    C   G            G                 + G EDVR L LRA+VGYDWVD+FN ++ RVRG+FT+ DV VLE                    TNP                          G K KTPMLLAVR+SPNLF++    S  VVE+LPDALARA AQL     RPL  DW RFLGVMGLCL+    G G  LAASAVA LFEE   DKL+FLTR+R+ +      E V+ G   H  + RG +   + V       +A      P+  + +GS T T SSV                AA    AE     EAG  I T +++ F+A            + T ++T +A+      V R GG                      GG    L SLLRP A+HEV  GYGEAV +RR+                TRAYKPCGLC+  FPVESL  G+T +LK L  FLA  G+PS ER +RKAS       L R+PLCVFC QFFDPD PGG++ P    +   G GR    G           E  +         TA ANGL+PFFDDRFP+  S+ PPP SSAPA  A        S   R  + +C   +        G    S+  + G              H  EA ELR +G LVR GCSIRDRL
Sbjct:    7 AAAVAAAARTCSRTRRENQPWWEIDLGGAFPVRCIRVHHPDRRTEATKAGASPFVDVSPFWIMTSAGAIGDAAPEEAKQLAISSKRVGSHGKVTVWNLGVNHFAAAVRVQAEGVKSLQLARVEVIKGGGTQQAKDAMQHQLAARTDSNYLPH----------------------------------------------HRQHHA--------------VPSSSEPRAE--VAANAAGGLG------------HTRPQTCSAVAAGA--------RSSSVAGERCSTTGQXXXXXXXXXEEG-----------------LPG-EDVRRLLLRAMVGYDWVDEFNGKDERVRGAFTEQDVVVLEV------------------QTNP--------------------------GGKGKTPMLLAVRESPNLFQL---LSSGVVEALPDALARAEAQL-PQAHRPLGLDWTRFLGVMGLCLESVYSGTG-LLAASAVARLFEEKTDDKLEFLTRRRNRLPP---RETVNEGAQQHKGKYRGFESAPAVVGADGSIGVAEGTPRGPTKGAKAGSGT-TGSSV----------------AAGSYSAEDTSMPEAGSSIGTRDDTLFEAGGSGASRGSRRRDGTPATTTSANGHGGALVSRPGGLVFGGXXXXXXXXXXXYRXXXXGGGAAALKSLLRPQARHEVVRGYGEAVCKRRERQREALKRAPEPDVEPTRAYKPCGLCQAPFPVESL--GSTVSLKVLATFLAIAGAPS-ERFDRKASGL---SALHRLPLCVFCGQFFDPDFPGGVIPPTRNAALTRGGGRRRLLGDVSFSSSTFSLESSLFPSSPSLRATAEANGLVPFFDDRFPERWSEAPPP-SSAPAGRASSLPPSSLSSPSRHFDGSCSSSSATGQHKGHGSTPSSVAKRRGCGXXXXXXXAGDRQHVGEAMELREIGGLVRRGCSIRDRL 797          
BLAST of mRNA_A-nodosum_M_contig1073.21.2 vs. uniprot
Match: A0A7S1U916_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U916_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.940e-20
Identity = 115/432 (26.62%), Postives = 171/432 (39.58%), Query Frame = 0
Query:  117 PLPLRVERTTCDMCLSAFESSSVSSTVTIRKRVLKARREWGVPGSEGRRFLSASYLYEPARLCVSCSQFFLFKKRSHGRELELDVDGVGRTKERASLTLESVVSKEPMDKAKARSASTLPDCPLTGKRRQLRGTQPDEPDEHNGGNYRLDDLIEDDGCLVIEENDLARLPGAIATQSSTTDHMGADVCVGLWGTHLSRVGERPGDHCPVAIKAQPTTREHGNPAPVKTITPLSIPANTAGTRHGIFLYPARAKHGTAAGDRLSTDNSNEERPTSGASTVVITAAFTRICSRTRRESHPWWEVDLGGVFPVRCIRVTHPDRRTEAAETEAQAVVDIAPFWIMTSAG-PIGQATPEEARELALESKRWGSHGKVTVWDLGFNRFATGVRIQAEGIKSLQLHRVEIIKGGGT----QQARDAIQHRLVDREPSTF 543
            PL  +  R  CD+C   F  ++V+  V+  KR+L  R  WG   S+  RF S + +Y  A+LC  C QFF         ++E D +       R S                  S +T                  D    H   N    +L+ +     ++E +LA   G  ATQSST D+ GAD+ V     +  R          +A +AQ                     A +   R  +F   A+A       D  + D                      + +RT RE   WW+VDLGG++P+R ++V +P      A +      ++APFWI+ S   P+GQ   E A++ A+   +   H   T W    N FA  VRIQ  G KS+QL  V ++KGG T    Q+     +H++  R  S +
Sbjct:   76 PLEPKYTRARCDLCHLYFAKAAVTPMVSF-KRLLDLRESWGHV-SKNVRFRSPAAMYNKAKLCQFCRQFF-----EGIADVEADTEEFNPNSNRTS------------------SGAT------------------DGWAAHIFDNIHSTNLLREARQSEVQERNLAY--GHRATQSSTLDNYGADIAVSREVYNAKRAA--------LAAEAQAA-------------------AGSTKVRRSVFHPTAQAMGADKLRDLAAGD----------------------VSTRTGREYQAWWQVDLGGLYPIRQVKV-YPRLSARGARS-----YELAPFWIILSEKKPMGQRLTE-AKKAAVALHQVTEHQSETAWACPANTFARFVRIQVPGTKSVQLCHVAVVKGGATVDYVQRKHKIKEHKIKRRASSAY 406          
BLAST of mRNA_A-nodosum_M_contig1073.21.2 vs. uniprot
Match: A0A7S3NGW4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGW4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.760e-10
Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 0
Query:  406 SRTRRESHPWWEVDLGGVFPVRCIRVTHPDRRTEAAETEAQAVVDIAPFWIMTSAGPIGQATPEEARELALESKRWGSHGKVTVWDLGFNRFATGVRIQAEGIKSLQLHRV 516
            S T+RE   WWEVDL G FP++CI++TH  R  + A             +I  ++ P+G+A   E ++LA  S         TVW L  N  A  VRIQ  G++ L +  V
Sbjct:  311 SCTKREYEAWWEVDLAGTFPIKCIQITHEQREEQGA-------------YIFLTSKPLGRARLNETKKLAFCSYPLQEDATTTVWSLPINANAACVRIQTRGVRDLSIKHV 408          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1073.21.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JM50_9PHAE1.040e-22337.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPB5_ECTSI3.670e-15439.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U916_9STRA4.940e-2026.62Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3NGW4_9STRA1.760e-1036.04Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 373..521
e-value: 8.0E-7
score: 31.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 632..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1061..1089
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1002..1026
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1073contigA-nodosum_M_contig1073:227269..233084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1073.21.2mRNA_A-nodosum_M_contig1073.21.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1073 227088..233578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1073.21.2 ID=prot_A-nodosum_M_contig1073.21.2|Name=mRNA_A-nodosum_M_contig1073.21.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1308bp
MSRGTNESMGRYRDHRGSQSVDSYQSIVTEPPNIRHQTKLHVKTDELMRP
PEARSGNGCPLSSDVAIIGLAEEGENRRRGPKERCVHWDRVEIDGKDTAL
EQANTTSTAPLMPKSAPLPLRVERTTCDMCLSAFESSSVSSTVTIRKRVL
KARREWGVPGSEGRRFLSASYLYEPARLCVSCSQFFLFKKRSHGRELELD
VDGVGRTKERASLTLESVVSKEPMDKAKARSASTLPDCPLTGKRRQLRGT
QPDEPDEHNGGNYRLDDLIEDDGCLVIEENDLARLPGAIATQSSTTDHMG
ADVCVGLWGTHLSRVGERPGDHCPVAIKAQPTTREHGNPAPVKTITPLSI
PANTAGTRHGIFLYPARAKHGTAAGDRLSTDNSNEERPTSGASTVVITAA
FTRICSRTRRESHPWWEVDLGGVFPVRCIRVTHPDRRTEAAETEAQAVVD
IAPFWIMTSAGPIGQATPEEARELALESKRWGSHGKVTVWDLGFNRFATG
VRIQAEGIKSLQLHRVEIIKGGGTQQARDAIQHRLVDREPSTFLLHGDSA
GIFSCCPQSSATSIALTAAPDVTATPNRSKIRRVSEDTTTLRRLQHFSQE
KCRDATTRQTCFAPASSRAVAESGMLISAGGDQRTGSPATTFEEPERTKP
LTSRTIAYSGPDLGRENGESSALRPRSCPVNGVGSPLGLRSGGNGSRRAT
SSGYSRRRRKLWMGGKEDVRGLFLRAVVGYDWVDDFNEQEMRVRGSFTDV
DVAVLEEIFLRCALGDDVTARGAISPTNPSLQLDPEEVCGNLRRLQLQLQ
TKGRGGNKSKTPMLLAVRDSPNLFKVRLFTSRVVVESLPDALARAGAQLF
ATTGRPLRFDWNRFLGVMGLCLQVASRGAGQTLAASAVAHLFEETRSDKL
DFLTRKRSHVSQPAAHEVVSVGKATHHEQGRGGDGIVSGVDLSSRAAIAP
SALSASGSWTSTQSSVDWGATGEVLSRRRGRAAASPAPAEVNIFNEAGFI
ETGEESSFDAESEPTESSTNTAHLQEHYKVKRGGGPPRWGGRNTVLNSLL
RPVAKHEVSLGYGEAVSQRRQRQRQALRRAPDPDPEPTRAYKPCGLCRVL
FPVESLAAGTTANLKALRAFLAAVGSPSVERLERKASASPCGGGLLRVPL
CVFCAQFFDPDSPGGIVSPDGYRSHGSGKGRGGHRGGREEDIIKRRWISA
NTAAANGLIPFFDDRFPDGLSDTPPPPSSAPADYAVMGTSLRFRPIESAC
LDGARLPCRSFRGFEADSIGSKGGVHHHREAKELRAVGRLVRGGCSIRDR
LRLLHTR*
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