prot_A-nodosum_M_contig1073.19.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1073.19.2
Unique Nameprot_A-nodosum_M_contig1073.19.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length314
Homology
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: D7FPB6_ECTSI (E2 ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB6_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 5.110e-60
Identity = 105/145 (72.41%), Postives = 112/145 (77.24%), Query Frame = 0
Query:    1 MTGDAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            M GDAGR+RKELAECARDT+SGVTA PKG+SL  L+GTILGP GTPFEGGTF+I+IDIP+GYPFEPPKMKF TKIWHPNISSQTGAICL                         LK  WSPALTIKTALLSLQALMCSPEPDDPQ
Sbjct:  162 MAGDAGRIRKELAECARDTDSGVTAVPKGDSLARLEGTILGPVGTPFEGGTFLINIDIPSGYPFEPPKMKFATKIWHPNISSQTGAICL-----------------------DILKDQWSPALTIKTALLSLQALMCSPEPDDPQ 283          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: A0A7S2UZ31_9STRA (E2 ubiquitin-conjugating enzyme n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ31_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.330e-50
Identity = 89/140 (63.57%), Postives = 100/140 (71.43%), Query Frame = 0
Query:    6 GRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            GRVRKEL+EC RD+ SGVTA PKG+ +  + GTI GPE TP++GG F I+I+IP  YPFEPPKMKF+TKIWHPNISSQTGAICL                         LK  WSPALTIKTALLSLQAL+CSPEPDDPQ
Sbjct:    5 GRVRKELSECERDSASGVTAKPKGDDVRFITGTIRGPESTPYDGGLFHINIEIPDTYPFEPPKMKFVTKIWHPNISSQTGAICL-----------------------DILKDQWSPALTIKTALLSLQALLCSPEPDDPQ 121          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: A0A7S4A4F6_9STRA (E2 ubiquitin-conjugating enzyme n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F6_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.670e-49
Identity = 86/142 (60.56%), Postives = 101/142 (71.13%), Query Frame = 0
Query:    4 DAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            D GR++KEL+E  +DTN+GVT TPKG+ L  L+GTI GP+ TP+ GG + I I IP+GYPFEPPKMKF+TK+WHPNISSQTGAICL                         LK  WSPALTIKTALLSLQAL+C+PEPDDPQ
Sbjct:    3 DRGRLKKELSELQKDTNAGVTVTPKGDQLTELEGTITGPDDTPYAGGFYRISISIPSGYPFEPPKMKFLTKVWHPNISSQTGAICL-----------------------DILKDQWSPALTIKTALLSLQALLCAPEPDDPQ 121          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: A0A835ZD13_9STRA (E2 ubiquitin-conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD13_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.780e-49
Identity = 89/145 (61.38%), Postives = 97/145 (66.90%), Query Frame = 0
Query:    1 MTGDAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            M  D  RV+KELAECA+DT S V   P G S+  L+GTI GP+GTPF GG F I I IP GYPFEPPKMKF T+IWHPNISSQTGAICL                         LK  WSPALTIKTAL+SLQAL+CSPEPDDPQ
Sbjct:    1 MASDLSRVKKELAECAKDTKSSVQCVPVGGSMTHLEGTIKGPDGTPFAGGVFKIDITIPGGYPFEPPKMKFTTRIWHPNISSQTGAICL-----------------------DILKDQWSPALTIKTALMSLQALLCSPEPDDPQ 122          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: F0XVN4_AURAN (E2 ubiquitin-conjugating enzyme n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVN4_AURAN)

HSP 1 Score: 171 bits (434), Expect = 3.550e-49
Identity = 89/145 (61.38%), Postives = 99/145 (68.28%), Query Frame = 0
Query:    1 MTGDAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            M  D GR++KEL E  RDT SGVT   K + +  L+G I GPEGTP+EGGT+ I I IP+GYPFEPPKMKF+TKIWHPNISSQTGAICL                         LK  WSPALTIKTALLSLQAL+CSPEPDDPQ
Sbjct:    1 MAFDRGRLKKELTELTRDTKSGVTVEVKSSDMMELEGVITGPEGTPYEGGTYQIGITIPSGYPFEPPKMKFLTKIWHPNISSQTGAICL-----------------------DILKDQWSPALTIKTALLSLQALLCSPEPDDPQ 122          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: A0A7S3NI41_9STRA (E2 ubiquitin-conjugating enzyme n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI41_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.030e-48
Identity = 90/145 (62.07%), Postives = 98/145 (67.59%), Query Frame = 0
Query:    1 MTGDAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            MT    RV+KEL+E  RDT SGV    K + L  L+GTI GPEGTP+EGGT+ I I IP GYPFEPPKMKF+TKIWHPNISSQTGAICL                         LK  WSPALTIKTALLSLQAL+CSPEPDDPQ
Sbjct:    1 MTDKNSRVKKELSELQRDTKSGVLVELKSDDLQELQGTIKGPEGTPYEGGTYKISIQIPKGYPFEPPKMKFLTKIWHPNISSQTGAICL-----------------------DILKDQWSPALTIKTALLSLQALLCSPEPDDPQ 122          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: W7TC01_9STRA (Ubiquitin-conjugating enzyme e2 27 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC01_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.060e-47
Identity = 84/139 (60.43%), Postives = 97/139 (69.78%), Query Frame = 0
Query:    3 GDAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEP 141
            GD  R++KEL ECA+D  SGVTA+P G+SLN L GTI GP+GTP+E G F I I IPT YPFEPPKMKF+TKIWHPNISSQ+GAICL                         LK  WSPALTIKTAL+SLQAL+C+P+P
Sbjct:    2 GDFSRIQKELRECAKDQKSGVTASPVGSSLNHLSGTITGPDGTPYEKGVFKIDIQIPTSYPFEPPKMKFVTKIWHPNISSQSGAICL-----------------------DILKDQWSPALTIKTALISLQALLCTPQP 117          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: A0A7S1BI39_9STRA (E2 ubiquitin-conjugating enzyme n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI39_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.380e-46
Identity = 86/143 (60.14%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    7 RVRKELAECARDTNSGVTATP----KGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            R+ KELA+CARDT SGVTA P      N+L  L GTI GPEGTP+ GG F++ IDIP  YPFEPPKM+F TK+WHPN+SSQTGAICL                         LK  WSPALTIKTALLSLQAL+CSPEP DPQ
Sbjct:   10 RITKELADCARDTKSGVTALPLNECSSNNLTKLVGTIEGPEGTPYAGGHFMVDIDIPQKYPFEPPKMRFKTKVWHPNVSSQTGAICL-----------------------DILKDQWSPALTIKTALLSLQALLCSPEPSDPQ 129          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: UPI0009012FA3 (ubiquitin-conjugating enzyme E2 27 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009012FA3)

HSP 1 Score: 161 bits (407), Expect = 3.680e-45
Identity = 84/143 (58.74%), Postives = 97/143 (67.83%), Query Frame = 0
Query:    4 DAGRVRKELAECARDTN-SGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            D GRV+KEL EC RD   SG+  +P+G+SL  L GTI GP GTP+EGGTF I I +P GYPFEPPKMKF TK+WHPNISSQ+GAICL                         LK  WSPALT+KTALLS+QAL+ +PEPDDPQ
Sbjct:    3 DLGRVQKELQECNRDVQVSGIKVSPRGDSLTHLSGTIPGPIGTPYEGGTFKIDITLPDGYPFEPPKMKFATKVWHPNISSQSGAICL-----------------------DILKDQWSPALTLKTALLSIQALLSAPEPDDPQ 122          
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Match: A0A2U1PPX8_ARTAN (E2 ubiquitin-conjugating enzyme n=2 Tax=Asteroideae TaxID=102804 RepID=A0A2U1PPX8_ARTAN)

HSP 1 Score: 159 bits (402), Expect = 2.060e-44
Identity = 83/143 (58.04%), Postives = 97/143 (67.83%), Query Frame = 0
Query:    4 DAGRVRKELAECARDTN-SGVTATPKGNSLNTLKGTILGPEGTPFEGGTFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTKSRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQ 145
            D  RV+KEL EC +D N SG++  PK ++L+ L GTI GP GTP+EGGTF I ID+P GYPFEPPKMKF TK+WHPNISSQ+GAICL                         LK  WSPALTIKTALLS+QAL+ +P PDDPQ
Sbjct:    3 DFSRVQKELQECNKDINVSGISVNPKSDNLSNLIGTITGPVGTPYEGGTFKIDIDLPGGYPFEPPKMKFATKVWHPNISSQSGAICL-----------------------DILKDQWSPALTIKTALLSIQALLSAPAPDDPQ 122          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1073.19.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPB6_ECTSI5.110e-6072.41E2 ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus... [more]
A0A7S2UZ31_9STRA4.330e-5063.57E2 ubiquitin-conjugating enzyme n=1 Tax=Fibrocapsa... [more]
A0A7S4A4F6_9STRA1.670e-4960.56E2 ubiquitin-conjugating enzyme n=1 Tax=Pelagomona... [more]
A0A835ZD13_9STRA1.780e-4961.38E2 ubiquitin-conjugating enzyme n=1 Tax=Tribonema ... [more]
F0XVN4_AURAN3.550e-4961.38E2 ubiquitin-conjugating enzyme n=1 Tax=Aureococcu... [more]
A0A7S3NI41_9STRA1.030e-4862.07E2 ubiquitin-conjugating enzyme n=1 Tax=Aureoumbra... [more]
W7TC01_9STRA2.060e-4760.43Ubiquitin-conjugating enzyme e2 27 n=1 Tax=Nannoch... [more]
A0A7S1BI39_9STRA8.380e-4660.14E2 ubiquitin-conjugating enzyme n=2 Tax=Corethron ... [more]
UPI0009012FA33.680e-4558.74ubiquitin-conjugating enzyme E2 27 n=2 Tax=Ipomoea... [more]
A0A2U1PPX8_ARTAN2.060e-4458.04E2 ubiquitin-conjugating enzyme n=2 Tax=Asteroidea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..164
e-value: 2.1E-36
score: 136.9
NoneNo IPR availablePANTHERPTHR24068:SF147UBIQUITIN-CONJUGATING ENZYME E2 Kcoord: 5..146
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 5..146
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 7..145
e-value: 3.4E-33
score: 114.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 3..178
score: 30.445927
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..145
e-value: 8.89863E-47
score: 152.742
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 3..155
e-value: 6.6E-41
score: 141.5
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 7..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1073contigA-nodosum_M_contig1073:195590..198041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1073.19.2mRNA_A-nodosum_M_contig1073.19.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1073 190431..213670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1073.19.2 ID=prot_A-nodosum_M_contig1073.19.2|Name=mRNA_A-nodosum_M_contig1073.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=314bp
MTGDAGRVRKELAECARDTNSGVTATPKGNSLNTLKGTILGPEGTPFEGG
TFVIHIDIPTGYPFEPPKMKFITKIWHPNISSQTGAICLVSATTVTIFTK
SRLCLLLLLYRDGRLKKIWSPALTIKTALLSLQALMCSPEPDDPQVWFLM
MRDNLFGLYTTSRGYGSGYFVVVAMINHLNTVLSYGSIFGLSFVFCMYGH
TYSKSMDQPGKVANRARGQLNREMNIPLSPFAGENLVSRDEFGSPVPRQP
AHLHAQAESSAYLRDSSRVPRRRPFIYLIPPYVIGSVPSLSVHAIAYRWR
SLPRVRRHRASKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD