prot_A-nodosum_M_contig1071.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1071.5.1
Unique Nameprot_A-nodosum_M_contig1071.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length232
Homology
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BLAST of mRNA_A-nodosum_M_contig1071.5.1 vs. uniprot
Match: D7G015_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G015_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 2.600e-46
Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 0 
Query:   92 YRNVTVREAVEWTMSNDSGFTYIDVRSAEEHENLATPRGALCIPAFERAHRVPSPAEDGADPSLPLDDED---------YNYENVEWKVLPDFVDRVKAQFKPDAKLLIGYKTKRSAEACRLLADAGFTELFNVESRTFMKTRLQQAW 230
            Y +VTVREAVEWTMS DS F+YID+RSAEEHE LAT RGALCIPAF+    +P   E G      LDD+D         YN+E  ++ V PDFVD +KA+F  DAKLLIG KT RSA+AC+LL +AGFTE++NVES+ FM+TR  + W
Sbjct:   71 YTDVTVREAVEWTMSRDSEFSYIDIRSAEEHEKLATVRGALCIPAFDLV--MPEAEEQGEG----LDDQDGDDTGYAPAYNFEESDYTVKPDFVDTMKARFDLDAKLLIGCKTYRSAKACQLLVEAGFTEIYNVESQIFMRTRAPEVW 212
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BLAST of mRNA_A-nodosum_M_contig1071.5.1 vs. uniprot
Match: A0A836CME5_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.980e-22
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 0 
Query:   92 YRNVTVREAVEWTMSNDSGFTYIDVRSAEEHENLATPRGALCIPAFERAHRVPSPAEDGADPSLPLDDEDYNYENVEWKVLPDFVDRVKAQFKPDAKLLIGYKT-KRSAEACRLLADAGFTELFNVESRTFMKTR 225
            ++++TV +AV+W      GF Y+D+R  EEHE +  P+ ++ +PAF                     D D+  ENVEW  +P F   V+A+F  DAKLLIG +   RS  AC+ L  AGF  L+NVES ++M+TR
Sbjct:    9 FKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAF-------------------TPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVESSSYMRTR 124
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BLAST of mRNA_A-nodosum_M_contig1071.5.1 vs. uniprot
Match: A0A7C2EQK6_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C2EQK6_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 2.930e-6
Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = 0 
Query:   93 RNVTVREAVEWTMSNDSGFTYIDVRSAEEHENLATPRGALCIPAFERAHRVPSPAEDGADPSLPLDDEDYNYENVEWKVLPDFVDRVKAQFKPDAKLLIGYKTK-RSAEACRLLADAGFTELFNV 216
            + ++ +EA +  + ND  + Y+DVRS  E +    PRGA+ IP     H +P     G  P+                   DF   V+A    DAKL IG KT  RSA AC +LA AG+T L NV
Sbjct:   13 KEISAQEAYD-LLENDKDYIYLDVRSVPEFD-AGHPRGAINIPLM---HFIPG---SGMQPNQ------------------DFQAVVEANIPKDAKLAIGCKTGGRSARACEVLAQAGYTNLANV 111
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1071.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G015_ECTSI2.600e-4658.78Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CME5_9STRA6.980e-2239.26Rhodanese domain-containing protein n=1 Tax=Tribon... [more]
A0A7C2EQK6_9BACT2.930e-636.00Rhodanese-like domain-containing protein n=1 Tax=B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 92..230
e-value: 9.3E-12
score: 46.9
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 86..217
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 107..219
score: 8.911086

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1071contigA-nodosum_M_contig1071:98705..102937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1071.5.1mRNA_A-nodosum_M_contig1071.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1071 98670..103459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1071.5.1 ID=prot_A-nodosum_M_contig1071.5.1|Name=mRNA_A-nodosum_M_contig1071.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=232bp
MSALFAWLLLDVSADAFITSSSLSSLSFDRERHACQQQYRSPVPTVPSRL
KCQAISKTCGAIPIFRRTCARSQSIPLMSAEEDITPPHTPEYRNVTVREA
VEWTMSNDSGFTYIDVRSAEEHENLATPRGALCIPAFERAHRVPSPAEDG
ADPSLPLDDEDYNYENVEWKVLPDFVDRVKAQFKPDAKLLIGYKTKRSAE
ACRLLADAGFTELFNVESRTFMKTRLQQAWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom