prot_A-nodosum_M_contig1070.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1070.10.1
Unique Nameprot_A-nodosum_M_contig1070.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length307
Homology
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Match: D7FU11_ECTSI (BRO1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU11_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 2.620e-128
Identity = 200/307 (65.15%), Postives = 232/307 (75.57%), Query Frame = 0
Query:    1 MTNQAVVWDKCMVLAAQALSYADTVYNMLEDNAGNKFTEAGVHLRTAAGIFERLHKVELPRWVGDTAKEPRLVEADPGTCEGLVKFCLAEAQQMAIGKALVAGTTPKTLLARLCGGVVKLLEDTVSAMRKGGASSPYEKLDAPFLLHIAFNQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPPLSGSLRDVYHEVQDLRGEFRALHDSYAKDNNSIYFDSIPSSDMLDLLPEPLMMMKPIPSEGGAPPAKILSFRAPNSAEKEEAEEAKA--GDQKTDEQLARELFEKLN 305
            +TNQAVVWDKCMVLAAQALSYADTVYNMLED+ G+KFTEAG HLR AAGIFERLHK ELPRWVGDT++ PRLVEA+PG CEGLV FCLAEAQQMAIGKALVAG TPKTLLARLC GV   LE+ VSAMRKGG+SS Y KLD+PFL+HI+F                                ACKY++ERRD VSVGLPPL+G LR++ H+++ L+GEFR L D+YAKDNNSIY++ +P  DMLD LP+P++MMKP+PSE  APP + LSFRA  SA  EE ++A       KTDE+LAR L EKLN
Sbjct:  122 ITNQAVVWDKCMVLAAQALSYADTVYNMLEDSQGSKFTEAGEHLRKAAGIFERLHKAELPRWVGDTSEAPRLVEAEPGICEGLVHFCLAEAQQMAIGKALVAGKTPKTLLARLCEGVRGQLEEAVSAMRKGGSSSAYHKLDSPFLVHISFQHA----------------------------SACKYVEERRDAVSVGLPPLAGPLRNISHDLKTLQGEFRQLRDAYAKDNNSIYYEPVPDLDMLDPLPQPVVMMKPLPSEEEAPPTETLSFRATGSAPGEEPKDASGLPDADKTDEELARALHEKLN 400          
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Match: A0A836CJ99_9STRA (BRO1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ99_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.020e-57
Identity = 120/280 (42.86%), Postives = 155/280 (55.36%), Query Frame = 0
Query:    1 MTNQAVVWDKCMVLAAQALSYADTVYNMLEDNAGNK---FTEAGVHLRTAAGIFERLHKVELPRWVGDTAKEPRLVEADPGTCEGLVKFCLAEAQQMAIGKALVAGTTPKTLLARLCGGVVKLLEDTVSAMR-KGGASSPYEKLDAPFLLHIAFNQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPPLSGSLRDVYHEVQDLRGEFRALHDSYAKDNNSIYFDSIPSSDMLDLLPEPLMMMKPIPSEGGAPPAKILSFRAPNS 276
            ++NQAVVWDKCM L +QAL++AD+VYNM+   AG     +  AG  LRTAAG+       ELPRWVG+TAK  R  EA PG CE L   CLA+AQQMA+GKAL  G TP TLLA+LCGGV   ++  +S +R K GA+  Y KL  P L H AF   +   LA+ F A  AW+++ +G  +A+       L             L         E+  LR E  A   SY +DN +IY+D +P        P+ ++MMKP P     PP   L FR P +
Sbjct:  123 ISNQAVVWDKCMALISQALAHADSVYNMVGAAAGGDDAVYAAAGRELRTAAGVLAHTASEELPRWVGETAKGERPPEAVPGVCEALSTLCLAQAQQMALGKALAGGKTPPTLLAKLCGGVADQMDAALSTLRDKAGAA--YAKLAKPLLAHAAFQAALQRALAHLFLASHAWAREAYGAAIAHQRRGAALLAR-----------LXXXXXXXXXELAALRAEAAAALASYERDNGAIYYDPVPGEPAAP--PDGVVMMKPEPYT--VPPLVALRFRPPRT 385          
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Match: L8HG99_ACACA (BRO1 domain-containing protein n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HG99_ACACA)

HSP 1 Score: 73.2 bits (178), Expect = 7.530e-11
Identity = 60/185 (32.43%), Postives = 95/185 (51.35%), Query Frame = 0
Query:   84 VKFCLAEAQQMAIGKALVAGTTPKTLLARLCGGVVKLLEDTVSAMRKGGASSPYEKLDAPFLLHIAFNQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPPLSGSLRDVYHEVQDLRGEFRALHDSYAKDNNSIYFDSIPSSDMLDLLPEPLMMMKPIPSEGGAPPAKI 268
            +  CLAEAQQ+A+ KA+  GT+  +LLA+L   + +       A++   A +  E +++ F L++  N  +F+GL Y+  A  A +   +G  VAYM +A   + E+  P          S  +VY   +D   E   L  +YA DN++IY+D +P    + L  E   +MK +P    APPA I
Sbjct:  245 INLCLAEAQQIAVQKAMAKGTSD-SLLAKLILDISQKYNIASFALK---AITGVEFVES-FRLYLTLNNLLFSGLTYKHLARDAHANGEYGRAVAYMQKAVGEVPEK--PKGRFTDAAFQSFVNVYGAERD---ELVKLAKAYASDNDAIYYDRVPPESEVVLPAEGRSLMKAVPY---APPAPI 416          
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Match: K3X5X5_GLOUD (BRO1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5X5_GLOUD)

HSP 1 Score: 66.2 bits (160), Expect = 2.030e-8
Identity = 67/266 (25.19%), Postives = 112/266 (42.11%), Query Frame = 0
Query:    7 VWDKCMVLAAQALSYADTVYNMLEDNAGNKFTEAGVHLRTAAGIFERLHKVELPRWVGDTAKEPRLVEADPGTCEGLVKFCLAEAQQMAIGKALVAGTTP--KTLLARLCGGV--------VKLLEDTVSAMRKGGASSPYEKLDAPFLLHIA-FNQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPPLSGSL---RDVYHEVQDLRGEFRALHDSYAKDNNSIYFDSIPSSD--MLDLLPEPLMMMKP 256
            +++  MVL+ +A+   +    +       K  +A      AAGIF+ + ++     +        L +      + L   CLA AQQ++I KA++    P  K++L +L GG           L+ +   +   G  +      DA  LL  A F   +     +  +AE+     R G  + Y   A    ++R     +GLPPL+ S+   R +   +   R     LH  Y K+N+SIYF+S+P  D  +L        +MKP
Sbjct:   96 IFELPMVLSTRAVLLLNRAKCVSRARDREKVPQAVAFCLEAAGIFDYILELMNAHLMDGIEAPSSLPDLSLDVLQSLQGVCLAIAQQLSIVKAVLHFDRPYSKSVLVKLHGGCQASFQLFEATLVRNCALSSSSGAMNVTVPCRDAKTLLSFASFFGRLHKAQVFLLSAELEHETHRIGPAIVYAKIAKTLFQDRTSIGGLGLPPLTDSVAVERIIGPLLATKRAAVDQLHADYTKENDSIYFESVPDHDATLLSATLSQAFIMKP 361          
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Match: UPI000644ADCF (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644ADCF)

HSP 1 Score: 59.3 bits (142), Expect = 2.520e-6
Identity = 48/239 (20.08%), Postives = 103/239 (43.10%), Query Frame = 0
Query:    2 TNQAVVWDKCMVLAAQALSYADTVYNMLEDNAGNKFTEAGV----HLRTAAGIFERLHKVELPRWVGDTAKEPRLVEADPGTCEGLVKFCLAEAQQMAIGKALVAGTTPKTLLARLCGGVVKLLEDTVSAMRKGGASSPYEKLDAPFLLHIAFNQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPPLSGSLRDVYHEVQDLRGEFRALHDSYAKDNNSIYFD 236
            +  ++ ++  MVL +  +++ +  Y++ E +  + F +       H++ AAGIFE +++VE+PR V  T  +   +E        +   C++    + + KAL  GT+ + +    C    K   +   ++ K  A + Y++L   F  ++  N  +   +  +  A  +     +G+G+ Y  +A   L + + P       +          V  L  E    + +  ++N  +YFD
Sbjct:  107 SGYSIRFELVMVLMSLGMAHYNRAYDLNESSNEDNFDDNAKLISNHIKIAAGIFEFINRVEIPRGVHQT--DEFQIECSSNMSLAMTMLCISLGNALTVRKALKQGTSHQVIAKISCEAWHK--SEMTKSLLKDDAHN-YKRLPKTFRNYLTSNLLLQHAITLKEMAMASVDSKHYGVGLTYFSQAMPLLSKIKKPSDARQQSI----------VTSLMSEIERENQTLTRENQVLYFD 330          
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Match: A0A2G4T4R6_RHIZD (pH-response regulator protein palC n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T4R6_RHIZD)

HSP 1 Score: 58.2 bits (139), Expect = 6.460e-6
Identity = 61/246 (24.80%), Postives = 109/246 (44.31%), Query Frame = 0
Query:   12 MVLAAQALSYADTVYN--MLEDNAGNKFTEAGVHLRTAAGIFERLHKVELPRWVGDTAKEPRLVEADPGTCEGLVKFCLAEAQQMAIGKALVAGTTPKTLLARLCGGVV---KLLEDTVSAMRKGGASSPYEKLDAPFLLHIAFNQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPPLSGS---LRDVYHEVQDLRGEFRALHDSYAKDNNSIYFDSIPSS-DMLDLLP 248
            ++      +YA T+    +L +N    + +A   L TAA +F  +    +P W    A E R +E        L K  LA+AQ +AI KAL +  T K+L+A+L  GV    ++    +++++  GA    +++ +  + ++A     +  +  +F A  A    + G  V +  E CK        +S+    L  S   LR  + E      E   L   Y   N+++ ++ +PS  D+  L+P
Sbjct:  119 LIFVLMTYAYACTLQTNYLLAENNPALYNKAADTLNTAASVFHFIANTVIPSW--SNAPENRPIETVRELAVALSKMALADAQAIAIKKALASNNTSKSLIAKLYMGVADQYQMAHGLITSIK--GAQ---DEVSSDLIKYLADGILFYKAMTKKFLAMHANDSQKMGQAVGFAKE-CKADLRLLQHMSLSKKHLKKSAIALRASHEEE-----EVNELISRYTMINDTVSYEPVPSKQDLQRLIP 351          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1070.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FU11_ECTSI2.620e-12865.15BRO1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CJ99_9STRA1.020e-5742.86BRO1-like domain-containing protein n=1 Tax=Tribon... [more]
L8HG99_ACACA7.530e-1132.43BRO1 domain-containing protein n=2 Tax=Acanthamoeb... [more]
K3X5X5_GLOUD2.030e-825.19BRO1 domain-containing protein n=1 Tax=Globisporan... [more]
UPI000644ADCF2.520e-620.08hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A2G4T4R6_RHIZD6.460e-624.80pH-response regulator protein palC n=4 Tax=Rhizopu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038499BRO1 domain superfamilyGENE3D1.25.40.280alix/aip1 like domainscoord: 1..266
e-value: 4.8E-37
score: 129.8
IPR004328BRO1 domainPFAMPF03097BRO1coord: 35..261
e-value: 8.7E-25
score: 87.3
IPR004328BRO1 domainPROSITEPS51180BRO1coord: 1..306
score: 10.089838
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..306
NoneNo IPR availablePANTHERPTHR23032:SF1BRO1 DOMAIN-CONTAINING PROTEIN BROXcoord: 5..257
IPR038898BRO1 domain-containing protein BROXPANTHERPTHR23032UNCHARACTERIZEDcoord: 5..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1070contigA-nodosum_M_contig1070:139659..143596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1070.10.1mRNA_A-nodosum_M_contig1070.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1070 138381..144237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1070.10.1 ID=prot_A-nodosum_M_contig1070.10.1|Name=mRNA_A-nodosum_M_contig1070.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=307bp
MTNQAVVWDKCMVLAAQALSYADTVYNMLEDNAGNKFTEAGVHLRTAAGI
FERLHKVELPRWVGDTAKEPRLVEADPGTCEGLVKFCLAEAQQMAIGKAL
VAGTTPKTLLARLCGGVVKLLEDTVSAMRKGGASSPYEKLDAPFLLHIAF
NQTMFTGLAYRFAAEIAWSKDRFGMGVAYMMEACKYLKERRDPVSVGLPP
LSGSLRDVYHEVQDLRGEFRALHDSYAKDNNSIYFDSIPSSDMLDLLPEP
LMMMKPIPSEGGAPPAKILSFRAPNSAEKEEAEEAKAGDQKTDEQLAREL
FEKLNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038499BRO1_sf
IPR004328BRO1_dom
IPR038898BROX