prot_A-nodosum_M_contig1068.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig1068.1.1
Unique Name	prot_A-nodosum_M_contig1068.1.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	98

Homology

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.220e-14
Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    1 IDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
             + F A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct:   26 FEEFLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 115

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BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A5BJG5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Vitis vinifera TaxID=29760 RepID=A5BJG5_VITVI)

HSP 1 Score: 75.9 bits (185), Expect = 4.050e-14
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0

Query:    8 LGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVK--KTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            L   F +KD G+A Y +G  I R+R    LK  Q +Y+E ++KRF++   K+TK P   G    SKA  P+N DE+EEM+  PY   VG+LM
Sbjct:   52 LSTHFDMKDFGEASYVLGIKILRDRANGVLKLSQRVYIERILKRFNMHNCKSTKAPIVKGD-KFSKAQCPQNDDEREEMKTIPYSSVVGSLM 142

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BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 6.570e-14
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct:   91 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 179

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.260e-13
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+  A  L+  Q  Y++SMV+RFDV+ T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct:   27 EELLASLNKKFPTKNLGECQWFDGCAIERDADAGTLRISQTAYIDSMVERFDVQSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 115

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.640e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct:  234 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 322

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5K1T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T2_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.780e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct:  487 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 575

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.900e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct:  947 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 1035

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.930e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct: 1326 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 1414

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.940e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct: 1346 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 1434

[Close]

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.940e-13
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0

Query:    2 DRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM 97
            +   A L +KF  K++G+  ++ GC I R+ +A  L+  Q  Y++SMV+RFDVK T++IPA  G        GP+  DE  E  ++P REA+G++M
Sbjct: 1489 EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE--EGGEWPVREAIGSMM 1577

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1068.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KPT0_9PHAE	1.220e-14	40.21	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A5BJG5_VITVI	4.050e-14	43.48	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JRS6_9PHAE	6.570e-14	39.58	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KBH1_9PHAE	2.260e-13	38.54	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KTL3_9PHAE	3.640e-13	39.58	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K1T2_9PHAE	3.780e-13	39.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSG8_9PHAE	3.900e-13	39.58	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JZQ8_9PHAE	3.930e-13	39.58	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN00_9PHAE	3.940e-13	39.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KF60_9PHAE	3.940e-13	39.58	Uncharacterized protein n=12 Tax=Ectocarpus sp. CC...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1068	contig	A-nodosum_M_contig1068:263834..264127 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1068.1.1	mRNA_A-nodosum_M_contig1068.1.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig1068 263834..264127 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig1068.1.1 ID=prot_A-nodosum_M_contig1068.1.1|Name=mRNA_A-nodosum_M_contig1068.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=98bp
IDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVK
RFDVKKTTKIPAASGGPTVSKADGPRNPDEKEEMRKFPYREAVGALM*