prot_A-nodosum_M_contig1065.35.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.35.1
Unique Nameprot_A-nodosum_M_contig1065.35.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length114
Homology
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: D8LRK4_ECTSI (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK4_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 9.690e-58
Identity = 92/113 (81.42%), Postives = 104/113 (92.04%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVPL 113
            MEIA+GPGKS+LMNGFMMYMSGAGI++ SIMITFMGIMNP KAI+++   FR+VDDGK SLLLPKLI+ A+NF GVCVALWKMAKMGLLPVTAADWTSYL+PK+AIE SGVPL
Sbjct:   57 MEIALGPGKSILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILSVHSVFRTVDDGKISLLLPKLIFCAVNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 169          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A6H5JF63_9PHAE (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF63_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 4.350e-50
Identity = 92/150 (61.33%), Postives = 105/150 (70.00%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNI----------------------------------PGT---FRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVPL 113
            MEIA+GPGK++LMNGFMMYMSGAGI++ SIMITFMGIMNP KAI+ +                                  P T   FR+VDDGK SLL+PKL++ ALNF GVCVALWKMAKMGLLPVTAADWTSYL+PK+AIE SGVPL
Sbjct:    1 MEIALGPGKTILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILGVHNGMPSSTILRTIPAMPTAHAPAQPAMSSPCPRFPQTYAVFRTVDDGKISLLMPKLLFCALNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 150          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A7S2FYU7_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYU7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.630e-41
Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVPL 113
            M IA GPGK ++MNGFMMYMSG+ IN+ SIMIT MG+ NP+ AIVN+   F  VDDG +   +PKLI+ ALN + +CVALWK   MGLLPVT+ADWTSYL+ K   E SG+P+
Sbjct:   61 MNIATGPGKQIMMNGFMMYMSGSQINIFSIMITAMGLWNPINAIVNVNKAFVKVDDGSHDCTMPKLIFCALNLLSLCVALWKCKAMGLLPVTSADWTSYLIEKTNDEMSGIPI 173          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A7S2DUV1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUV1_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.160e-35
Identity = 62/113 (54.87%), Postives = 82/113 (72.57%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVPL 113
            M+IA  PGK++LMNGFMMYM+G+ IN+ SIM+  M + NP+ AI  I   F  VDDG   L++PKLI+  LN + +CV LWK  +MGLLP+T+ADWTSYL+ K  +  SGVP+
Sbjct:   59 MDIATAPGKNILMNGFMMYMTGSYINIFSIMMLSMSLWNPLNAIAGINKAFTKVDDGTVDLIMPKLIFFCLNVLSLCVGLWKCGRMGLLPITSADWTSYLLTKVDVSSSGVPI 171          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A7S2SV60_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV60_9STRA)

HSP 1 Score: 127 bits (319), Expect = 5.720e-35
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    2 EIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVP 112
             +A  PGK +LMNGFMMYMSG+ IN+ SIMIT MGI  P+ AI  I   FR V+DG   L +PKLI+ ALN + + VA+WK   MGLLP+TAADWT YL+ K  +E +G+P
Sbjct:   67 NMATAPGKQILMNGFMMYMSGSQINIFSIMITTMGIWTPINAIAGINKHFRRVEDGNVDLTMPKLIFFALNILSLGVAMWKCKAMGLLPITAADWTGYLVDKEMLEVTGIP 177          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: F0YNL3_AURAN (ER membrane protein complex subunit 4 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL3_AURAN)

HSP 1 Score: 111 bits (277), Expect = 2.310e-29
Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTF-RSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVPL 113
            ME+ + PGK++ M GFMM+MSG+ IN+ SIMIT M  +NPVK+I+ I  TF R   D    L LPKL +   N   + +ALWK+  MGLLP+TAADWTS+L+ K  +E S VP+
Sbjct:    4 MEMGIAPGKNIFMQGFMMWMSGSSINIFSIMITGMAFINPVKSILAIDDTFKRFAHDPAVDLTLPKLAFVGCNCGMIALALWKLNTMGLLPITAADWTSFLVDKTHVESSSVPI 117          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A5D6XRF1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRF1_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.800e-28
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYS 109
            MEI M P KSL+  GFMM+MSG+ +N+ SIM+T M IMN  K+++N+ G F SV+DG   L+ PKL+Y A N   V +A++K A MGLLP TAADWT  L  K AIE S
Sbjct:   66 MEIGMAPFKSLMQTGFMMWMSGSSVNIFSIMVTGMIIMNTFKSLLNLQGAFVSVNDGVVDLVQPKLVYVAGNLANVAMAVYKCANMGLLPTTAADWTWLLPIKQAIETS 174          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A7R9UC88_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC88_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.480e-28
Identity = 53/110 (48.18%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    2 EIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGV 111
            +I   P + +LM GFMMYMSG+ IN+ SIMIT M  +NP+ AI N+  TF  +DDGK  L + KL + A+  +G+ +A+WK   MGLLP+T+ADW+ Y++ + A+E +GV
Sbjct:   80 QITTKPVQQILMQGFMMYMSGSTINIFSIMITSMAFINPLTAIANVNSTFARLDDGKIDLTMQKLAFVAVQILGLLLAMWKCGTMGLLPLTSADWSGYIVIRKALEAAGV 189          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A7S1YWL0_TRICV (ER membrane protein complex subunit 4 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWL0_TRICV)

HSP 1 Score: 108 bits (271), Expect = 1.290e-27
Identity = 56/114 (49.12%), Postives = 79/114 (69.30%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDD--GKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVP 112
            M IA  PGK +LMNGFMMYMSG  +N+ SI IT M +MNP+ +I+++  TF+  +D  GK  L +PK+I+ ALN V + V L+KM+ M LLP T+ADW+  ++ K  +E S +P
Sbjct:   74 MSIATSPGKQILMNGFMMYMSGKTLNIFSISITSMAVMNPIMSILSVNNTFKVFEDPDGKVDLQMPKMIFMALNLVWLFVGLYKMSSMRLLPTTSADWSGTVVWKELMEISSIP 187          
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Match: A0A7S2H7B0_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H7B0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.870e-27
Identity = 56/114 (49.12%), Postives = 76/114 (66.67%), Query Frame = 0
Query:    1 MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGTFRSVDD--GKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYLMPKNAIEYSGVP 112
            M +A  PGK +LMNGFMMYMSG  +N+ SI IT M +MNP+K+I  +  TFR  +D  GK  L + K+I+ A+N V   V L+KM  M LLP T+ADW+ Y++ K  +E S +P
Sbjct:   78 MSVATSPGKQMLMNGFMMYMSGKNLNIFSISITSMALMNPLKSIFTMNNTFRPFEDPDGKVDLQMAKIIFLAMNLVWFSVGLYKMGTMRLLPTTSADWSGYVVWKEMLETSSIP 191          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK4_ECTSI9.690e-5881.42ER membrane protein complex subunit 4 n=1 Tax=Ecto... [more]
A0A6H5JF63_9PHAE4.350e-5061.33ER membrane protein complex subunit 4 n=1 Tax=Ecto... [more]
A0A7S2FYU7_9STRA8.630e-4161.06ER membrane protein complex subunit 4 n=1 Tax=Flor... [more]
A0A7S2DUV1_9STRA1.160e-3554.87ER membrane protein complex subunit 4 n=1 Tax=Dict... [more]
A0A7S2SV60_9STRA5.720e-3556.76ER membrane protein complex subunit 4 n=1 Tax=Rhiz... [more]
F0YNL3_AURAN2.310e-2951.75ER membrane protein complex subunit 4 (Fragment) n... [more]
A0A5D6XRF1_9STRA1.800e-2855.05ER membrane protein complex subunit 4 n=1 Tax=Pyth... [more]
A0A7R9UC88_9STRA5.480e-2848.18ER membrane protein complex subunit 4 n=1 Tax=Ping... [more]
A0A7S1YWL0_TRICV1.290e-2749.12ER membrane protein complex subunit 4 n=1 Tax=Trie... [more]
A0A7S2H7B0_9STRA2.870e-2749.12ER membrane protein complex subunit 4 n=1 Tax=Heli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009445TMEM85/ER membrane protein complex subunit 4PFAMPF06417DUF1077coord: 2..99
e-value: 7.8E-32
score: 109.7
IPR009445TMEM85/ER membrane protein complex subunit 4PANTHERPTHR19315ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4coord: 1..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:181384..181990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.35.1mRNA_A-nodosum_M_contig1065.35.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 180887..182621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.35.1 ID=prot_A-nodosum_M_contig1065.35.1|Name=mRNA_A-nodosum_M_contig1065.35.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=114bp
MEIAMGPGKSLLMNGFMMYMSGAGINMISIMITFMGIMNPVKAIVNIPGT
FRSVDDGKNSLLLPKLIYSALNFVGVCVALWKMAKMGLLPVTAADWTSYL
MPKNAIEYSGVPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009445TMEM85/Emc4