prot_A-nodosum_M_contig1065.32.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.32.1
Unique Nameprot_A-nodosum_M_contig1065.32.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length270
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1065.32.1 vs. uniprot
Match: D8LRK5_ECTSI (Yae1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK5_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.780e-6
Identity = 106/240 (44.17%), Postives = 128/240 (53.33%), Query Frame = 0 
Query:    1 MEEKRVDELDNIGQDDFFGDDGNDDGQAVMMSPMAESRDLAALKTRLTTLGYQDGVXXXXXXXXXXXXXXXXXXXXXXXWEVGSLYGGCAXXXXXXXXXXXXXXXXXXXXXXPPTAHGGNTVPHVEGE--GVGEANECSETIDGHPTEMLP-GVAGPATRTSERTQHEGDRKQYKTFDEGLGSTTVGQEWGGIEELSKLAEELKQASLVGPDGPSV-DKAGILRRLTLTGPAGKAVSNAL 236
            MEEKR +     G D+FFGDD  ++ +      MA+ R+LAAL+ RLTTLGYQDGV XXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXX    A GG +     G   G+        +  G      P G  G +                    EG  +T      G  E+L +L  EL++ASL+GPDGP V D+A +LRRL     AG AV++ L
Sbjct:    1 MEEKRPEIFGVDGVDEFFGDDVEEERE--QSRDMAD-RELAALQARLTTLGYQDGVDXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXLKQAARGGQSTEKDAGTVGGLRLETAAGSSTSGAALSAAPLGSTGASEIAGXXXXXXXXXXAVSQPVEGYRNTKTSPAAGTAEDLQRLVGELRRASLLGPDGPGVPDRAEVLRRLRXXXXAGVAVADGL 221
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRK5_ECTSI1.780e-644.17Yae1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019191Essential protein Yae1, N-terminalPFAMPF09811Yae1_Ncoord: 51..87
e-value: 6.7E-10
score: 38.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
IPR038881Yae1-likePANTHERPTHR18829PROTEIN YAE1 HOMOLOGcoord: 13..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:167151..175705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.32.1mRNA_A-nodosum_M_contig1065.32.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 167142..180806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.32.1 ID=prot_A-nodosum_M_contig1065.32.1|Name=mRNA_A-nodosum_M_contig1065.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=270bp
MEEKRVDELDNIGQDDFFGDDGNDDGQAVMMSPMAESRDLAALKTRLTTL
GYQDGVEDGVEEVVQDGFDKGFAAGATAGWEVGSLYGGCAAAAAALKQAA
ASSGRRRPPSAEPPTAHGGNTVPHVEGEGVGEANECSETIDGHPTEMLPG
VAGPATRTSERTQHEGDRKQYKTFDEGLGSTTVGQEWGGIEELSKLAEEL
KQASLVGPDGPSVDKAGILRRLTLTGPAGKAVSNALSSSLCASVNTNTRM
IVSRREAINVNRAAVKPGV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019191Essential_protein_Yae1_N
IPR038881Yae1-like