prot_A-nodosum_M_contig1065.16.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.16.2
Unique Nameprot_A-nodosum_M_contig1065.16.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length350
Homology
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 2.050e-124
Identity = 195/309 (63.11%), Postives = 237/309 (76.70%), Query Frame = 0
Query:   46 VGLKSASTMVYASTSTLKSKILQLAAVMDRGGMAN---KGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXS---------------SGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQVLGSVPVTKQTVVYIDDDLRVMRDEAGELFIYSR 336
            + +KS   M   S + +KSK+LQLAA MDRGGMAN   +GVS+AYLG++DDMR LV++LAQL+PV KP+ + +LSG+WEL+YTTVELFRASPFFQMVEAGY+DPEKSN FFKLHQLQTGSWG S+IG              S               +   G+V+  D K G  E+ T +     G +GSLESEVDLI+LPLTS+P++GFWKLLPTFGGCI+T+A CSL GDNNE+V+L+VESTKLKAVEDVPLLP+AGP FEG EFPT +VTK+V+G+VPVTKQTVVYIDD LRVM D+AGEL+IY+R
Sbjct:    1 MAMKSPVRMASDSVAEVKSKVLQLAASMDRGGMANPGNRGVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEGRDATATPAAEAEAAAAGAVEGSD-KAGVVEDNTDM----SGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKKVMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC)

HSP 1 Score: 181 bits (458), Expect = 2.080e-50
Identity = 100/280 (35.71%), Postives = 157/280 (56.07%), Query Frame = 0
Query:   58 STSTLKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFF-EGREFPTAQVTKQVLGSVPVTKQTVVYIDDDLRVMRDEAGELFIYSR 336
            ST+ LK ++LQLAA  DRG  A K         ++ +  +VD+L+   P +       L+G W L+Y + +LFR+SPFF  ++A Y+D +K++ FFKLH+LQT SWG S I                                    T++  +    +G L S+ ++ +LP T +P++G+WKLLPTFGG + + A+ S+ GD N+ ++L V+ TK+KA ED+PL+P+ G F  E      + V K++ GSVP  + T V++D  +R+ +D  GE+F+Y R
Sbjct:   56 STADLKMRLLQLAASTDRGQQATKR-------QKEQISNVVDDLSSRGPFD--CSPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQ-------------------------------TLLFPEANSTDGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLRGSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR 295          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: W7T369_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T369_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.970e-40
Identity = 112/331 (33.84%), Postives = 173/331 (52.27%), Query Frame = 0
Query:   13 VVGIVLTCLNP--ASAFLTSASAGGRLTRYQASSNVGLKSASTMVYASTSTLKSKILQLAAVMDRGGMANKGVSNA--YLGSRDDMRQLVDNLAQLEPVEKPILS-AQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNE----IVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQV----LGSVPVTKQTVVYIDDDLRVMRDEAGE 330
            V+GI    +NP  +S F++S    GR T    + ++ L S +T    S +++K K+ QLAA+ DRG + +  VS+   Y   R+ M  L++ L       K  +S   L G+WEL+Y+T +LFR+SPFFQ +E  Y DP KS  FFKLH+LQT SWG S+IG                      +T+D++           AQ      +L S  D +L PLT++P+IG++KLLPTFGG + + A      ++++     +E  V  T  K +  +  +P+ G + E ++FPT +    +     G  P     VVY+D+D R++R+  GE
Sbjct:   40 VLGIDKHPINPLTSSLFISSTVHNGRST----ARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRV-------------------AQTIDLQ-----------AQ------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGE 330          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO)

HSP 1 Score: 152 bits (384), Expect = 7.600e-40
Identity = 93/281 (33.10%), Postives = 144/281 (51.25%), Query Frame = 0
Query:   62 LKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVP---LLPVAGPFFEGREFPTAQVTKQVL---GSVPVTKQTVVYIDDDLRVMRDEAGELFIYSR 336
            +K +ILQ +A +DRG + ++ VS+AY G R  + +L+  L   +  E     + ++G+WEL+Y+T +LFR+SPFF  ++A + D EKS  FFKLH LQ  SWG S +G                      + +D +                 +    SE D I+  LT +P+ G++KLLPTFGG + + A           +++ ++ T+++A   +P    LPV G      +FP ++V K +    G  P    TV Y+DD  R+M D  GELF+YSR
Sbjct:   68 IKLQILQHSATLDRGQLHDRLVSDAYEGKRQKILELIQELCSRK-TESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRV-------------------AQNIDFE-----------------SNQFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNGGRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A2BX06_PROM5 (Possible Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus (strain MIT 9515) TaxID=167542 RepID=A2BX06_PROM5)

HSP 1 Score: 149 bits (376), Expect = 1.950e-39
Identity = 99/285 (34.74%), Postives = 147/285 (51.58%), Query Frame = 0
Query:   59 TSTLKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGS-LESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQVLGSVPVTKQT------VVYIDDDLRVMRDEAGELFIYSR 336
            T  +K KI Q+AA+ DRG   NK +S  Y    ++M  L+  L   E +   I   +LSG+WEL+Y+TVELFR+SPFF  +E   ND  KSN FFKLHQLQ GS+G+S IG                                      IAQ    N     S  D I+  L+++P++G++KLLPTFGG + T A      DN+  +++ ++ TK+  VE +  +P+       R +P     K V   +P  K++      ++Y+D+++R+M+D  G +FIY R
Sbjct:    4 TDEVKKKIYQIAAITDRGQRLNKLISPIYQEKLEEMEALIKIL---ECLNFEISEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGR-------------------------------------IAQNIDFNKKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNS--LQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPV----KGVWDKLPWNKESPSCEVSIIYLDEEMRIMKDIYGSIFIYVR 242          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A2C2Q8_PROM1 (PAP_fibrillin domain-containing protein n=6 Tax=Prochlorococcus TaxID=1218 RepID=A2C2Q8_PROM1)

HSP 1 Score: 148 bits (374), Expect = 4.170e-39
Identity = 92/277 (33.21%), Postives = 144/277 (51.99%), Query Frame = 0
Query:   62 LKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQVLGSV--PVTKQTVVYIDDDLRVMRDEAGELFIYSR 336
            LK+ I Q+AA  DRG   N  ++  Y    ++M++LV++L   +P+   I  + + G+WEL+Y++VELFR+SPFF  +E   ND  KS+ FFKLH LQ GS+G+S +G                                              G + S  D  +  LT++P++G++KLLPTFGG + T A+  L+  NN I+ + +E TK+  V+ +  +P        R +P   V K +  +   P  + +V+Y+D DLR++RD  G LF+Y R
Sbjct:    7 LKALIYQVAAATDRGQRMNAMIAPMYQNKLEEMKKLVEDL---QPLSDEITQSSIEGEWELIYSSVELFRSSPFFLAIEKALNDKSKSDLFFKLHLLQVGSFGLSTVGRVGQYLNF------------------------------------TKGEMISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLAN-KLQLKNN-ILSMELEKTKVSEVDGLGKIPFVNSILMERWYPVKNVWKLLPWNKENPNCEISVIYVDKDLRIIRDMHGALFVYIR 242          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.410e-39
Identity = 99/284 (34.86%), Postives = 150/284 (52.82%), Query Frame = 0
Query:   58 STSTLKSKILQLAAVMDRGGMANKGVSNA--YLGSRDDMRQLVDNLAQLEPVEKPILS-AQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNE----IVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQV----LGSVPVTKQTVVYIDDDLRVMRDEAGE 330
            S +++K K+ QLAA+ DRG + +  VS+   Y   R+ M  L++ L       K  +S   L G+WEL+Y+T +LFR+SPFFQ +E  Y DP KS  FFKLH+LQT SWG S+IG                      +T+D++           AQ      +L S  D +L PLT++P+IG++KLLPTFGG + + A      ++ +     +E  V  T  K +  +  +P+ G + E ++FPT +    +     GS P     VVY+D+D R++R+  GE
Sbjct:   12 SVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRV-------------------AQTIDLQ-----------AQ------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGE 259          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A0A7S4FT55_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FT55_9EUGL)

HSP 1 Score: 152 bits (384), Expect = 1.020e-38
Identity = 104/285 (36.49%), Postives = 152/285 (53.33%), Query Frame = 0
Query:   57 ASTSTLKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRA-HCSLKGDNNEIVELVVESTKLKAVEDVPLLP-VAGPFFEGREFPTAQVTKQVLG---SVPVTKQTVVYIDDDLRVMRDEAGELFIYSR 336
            A+ + LK KIL +AA+ DRG    K VS+A     D M+ LV  L    P    I   +++GKWEL+Y++VELFR+SPFF  +E  +NDP KS+ FFKLH LQ GSWG+S IG                      + +D +    +ET             +ES+ D  +  LT +P++G++KLLPTFGG + T A +  L+GD   ++ + +E T++     VP +P VAG   +  ++       Q+L      P     ++Y+DDD RV+ D+ G LFIY R
Sbjct:  196 AALAELKRKILHVAALTDRGQRHLKIVSDAMKDREDMMKDLVKELVDNHPCY--ISEQKVAGKWELVYSSVELFRSSPFFLAIEQAFNDPSKSDLFFKLHLLQVGSWGVSTIGEVS-------------------QRIDFE----KET-------------MESDFDTTIFGLTVIPIVGWFKLLPTFGGRVVTEAKNLKLEGD---MLSMELERTQVINAPGVPRIPFVAGAVMD--KWVPVNAVWQLLPWNKEKPTCSVRLLYVDDDFRVVEDQTGGLFIYMR 437          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: A0A7S2Q3B1_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q3B1_9DINO)

HSP 1 Score: 146 bits (368), Expect = 2.250e-38
Identity = 91/274 (33.21%), Postives = 139/274 (50.73%), Query Frame = 0
Query:   68 QLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVE--LFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQVL---GSVPVTKQTVVYIDDDLRVMRDEAGELFIYSR 336
            +LAA +DRG   N    + Y    +  R L++ +    P   P   A++ G+WEL+++TV+  +FR+SPFF  V+      ++S+ FFKLH+LQ  SWGIS++G                                     V        G L SE D  LL LT++P+IGFWKLLPTFGGC+ T +   L GD    +++ V+ T+ + V  +P  P+AG    G+  P   + + +    G  PV    + Y+D+D+R++ D  GELF+Y+R
Sbjct:    1 RLAAALDRGQAYNPTSGDHYAERMETARSLIEEIISEAP-PPPTSLAEIDGEWELVFSTVKHGIFRSSPFFLAVQEALGGRDQSDLFFKLHELQVMSWGISKVGR------------------------------------VAQYINSTEGKLYSEFDTSLLSLTTIPIIGFWKLLPTFGGCVVTASDVGLNGDR---LDMEVQWTEAREVPGLP--PLAGAIL-GQRVPVNSIWQALPWNEGRRPVCSVALRYLDEDMRIVADNDGELFVYTR 231          
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Match: Q31AK5_PROM9 (Gram-negative pili assembly chaperone-like protein n=38 Tax=Prochlorococcus TaxID=1218 RepID=Q31AK5_PROM9)

HSP 1 Score: 146 bits (369), Expect = 2.460e-38
Identity = 95/281 (33.81%), Postives = 145/281 (51.60%), Query Frame = 0
Query:   62 LKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDNLAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSNQFFKLHQLQTGSWGISRIGXXXXXXXXXXXXXXSSGPEGSVKTVDIKGGGGEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCISTRAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVTKQVLGSVPVTKQT------VVYIDDDLRVMRDEAGELFIYSR 336
            +KS I ++AAV DRG   NK +S  Y    ++M +L+D+L  L      I    LSG+WEL+++ VELFR+SPFF  +E   ND  KSN FFKLHQLQ GS+GIS IG                      + +D                   N    S  D  +  LT++P++G++KLLPTFGG + T A   +  +N+  +++ ++ TK+  V+ +  +P        R +P     K V   +P  K++      +VY+D+++R+M+D  G +FIY R
Sbjct:    7 IKSNIYKIAAVTDRGQRLNKLISPMYEEKNNEMVELIDDLKNLS---FEISEKSLSGEWELIFSNVELFRSSPFFLAIENALNDEFKSNLFFKLHQLQVGSFGISTIGRI-------------------AQKIDFD-----------------NKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLKNNS--LDMNLQKTKVSKVDGLNKIPFFSELLMDRWYPV----KDVWNKLPWNKESPNCHVSIVYLDEEMRIMQDMYGSIFIYIR 242          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.16.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIK9_9PHAE2.050e-12463.11PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A0G4EA07_VITBC2.080e-5035.71PAP_fibrillin domain-containing protein n=1 Tax=Vi... [more]
W7T369_9STRA6.970e-4033.84Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A061RCL2_9CHLO7.600e-4033.10Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL... [more]
A2BX06_PROM51.950e-3934.74Possible Gram-negative pili assembly chaperone n=1... [more]
A2C2Q8_PROM14.170e-3933.21PAP_fibrillin domain-containing protein n=6 Tax=Pr... [more]
A0A4D9CZF7_9STRA4.410e-3934.86PAP_fibrillin domain-containing protein n=2 Tax=Na... [more]
A0A7S4FT55_9EUGL1.020e-3836.49Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2Q3B1_9DINO2.250e-3833.21Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
Q31AK5_PROM92.460e-3833.81Gram-negative pili assembly chaperone-like protein... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 62..129
e-value: 2.4E-6
score: 27.6
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 60..177
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 270..338
NoneNo IPR availablePANTHERPTHR31906:SF35PLASTID LIPID-ASSOCIATED PROTEIN/FIBRILLIN CONSERVED DOMAINcoord: 270..338
NoneNo IPR availablePANTHERPTHR31906:SF35PLASTID LIPID-ASSOCIATED PROTEIN/FIBRILLIN CONSERVED DOMAINcoord: 60..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:86630..90645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.16.2mRNA_A-nodosum_M_contig1065.16.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 85915..90719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.16.2 ID=prot_A-nodosum_M_contig1065.16.2|Name=mRNA_A-nodosum_M_contig1065.16.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=350bp
MVPTARFSVYRVVVGIVLTCLNPASAFLTSASAGGRLTRYQASSNVGLKS
ASTMVYASTSTLKSKILQLAAVMDRGGMANKGVSNAYLGSRDDMRQLVDN
LAQLEPVEKPILSAQLSGKWELLYTTVELFRASPFFQMVEAGYNDPEKSN
QFFKLHQLQTGSWGISRIGRITQVVDLVDPAEPSSGPEGSVKTVDIKGGG
GEETTIVIAQERGVNGSLESEVDLILLPLTSLPVIGFWKLLPTFGGCIST
RAHCSLKGDNNEIVELVVESTKLKAVEDVPLLPVAGPFFEGREFPTAQVT
KQVLGSVPVTKQTVVYIDDDLRVMRDEAGELFIYSRFDGPTDRNEGGPL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP