prot_A-nodosum_M_contig1063.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1063.7.1
Unique Nameprot_A-nodosum_M_contig1063.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length246
Homology
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 8.250e-44
Identity = 83/197 (42.13%), Postives = 108/197 (54.82%), Query Frame = 0
Query:    2 CDSENSNEACAYDGGDCCPCTKYLSWSDDFVQEVWDMFCRDPSSGCLDP---RVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCTRASNESSFSL-------------CVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCTNGQFVYCGSF-GFSCVDPDVITKDAN 181
            CD EN+NE C YDGGDCC CT   +W DD+     +  C DPS+ C+D     VDM  NC  G +  +G+ WCD  NNNE C +DGGDCC CT    ++                 C+DP A C N   +T+     N     +G+G+CD DNNN+ C YDGGDCC CTC +     CG + GF+C+DP+    D +
Sbjct:   66 CDQENNNEICGYDGGDCCECTCVNAWDDDYSCAA-NSACIDPSAPCVDDDDVTVDMVENC--GYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIV-ENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDED 258          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 6.040e-36
Identity = 78/190 (41.05%), Postives = 104/190 (54.74%), Query Frame = 0
Query:    2 CDSENSNEACAYDGGDCCPCTKYLSWSDDFVQEVW-----DMFCRDPSSGCL---DPRVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCT-----RASNESSFSLCVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCT---NGQFVYCGSFG-FSCVDPD 174
            CD  N+NE C YDGGDCC CT  +   DD+  +++        C DPS+ C+   D  VD+  +C       +GD +CD  NNN  C +DGGDCC CT     +    S F+ C+DPGA C +  +VTV        +  +G+GWCD +NNN+ C YDGGDCC CTC    N  +      G F+C DP+
Sbjct:  114 CDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCD---AVGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGGRSGFA-CIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPN 299          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.170e-34
Identity = 82/191 (42.93%), Postives = 103/191 (53.93%), Query Frame = 0
Query:    4 SENSNEA-CAYDGGDCCPCTKYLSWSDDFVQEVWDMFCRDPSSGCLDP---RVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCTRASNESSFS------------LCVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCTN---GQFVYCGSFG-FSCVDPD 174
            SEN N   CAYDGGDCC CT    + DD+   +W   C DP + C+D     VDM+ NC   V  DIG+ WCD ANN E C +DGGDCC CT    ES +              C+DP A C +   +TV      G ++ IG+GWCD +NN + C YDGGDCC CTC +     +     +G F C DP+
Sbjct:  137 SENLNTPECAYDGGDCCSCTCESPYDDDWGC-MW-FACIDPEAACVDDDDITVDMFENCEYPV--DIGNGWCDEANNIEACGYDGGDCCECT-CEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPN 322          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.700e-34
Identity = 81/207 (39.13%), Postives = 103/207 (49.76%), Query Frame = 0
Query:    2 CDSENSNEACAYDGGDCCPCTKYLS-------WSDDFVQEVW-------DMFCRDPSSGCL---DPRVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCTRASNESSFS-----------------LCVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCTNGQFVYCGSFG-FSCVDP 173
            CD +N+NE C YDGGDCC CT           W DD   + W          C DP++ C+   D   DM  NC  G +  +GD WC   NNNE C +DGGDCC CT  +  +                     C+DP AAC +   VTV        ++ IGDG+C+ DNNN+ C YDGGDCC CTC +     CG +  F+C+DP
Sbjct:   64 CDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDD---DDWLCSSGGSGFACIDPAAPCVEDDDITADMVENC--GYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVS-IGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACIDP 264          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 2.460e-32
Identity = 77/201 (38.31%), Postives = 103/201 (51.24%), Query Frame = 0
Query:   13 YDGGDCCPCTKYLSWSDD----FVQEVWDMFCRDPSSGCLDP---RVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCTRASNES--------SFSLCVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCT-----------NGQFVYCGSFGFSCVDPDV-ITKDANLCVEL 186
            YDGGDCC CT    W DD      ++     C DP + C+D     V++  NC    +   GD WCD  NNNE C +DGGDCC CT  S           +++ C+DP A C +   +T       G +  +GDGWCD DNNN+ C YDGGDCC CTC            +  +  CGS GF+C+DP+     D ++ V++
Sbjct:   21 YDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDTWGL---GDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGS-GFACIDPNAPCVNDDDITVDV 217          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.330e-22
Identity = 56/125 (44.80%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    2 CDSENSNEACAYDGGDCCPCT-KYLS---WSDDFVQEVWDMFCRDPSSGCL---DPRVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCT---------RASNESSFSLCVDPGAACY 110
            CD  N+NEAC YDGGDCC CT +Y S   W DD+     +  C DP++ C+   D  VDM+ NC  G +  IG+ WCD  NN E C +DGGDCC CT           S+E     C DP A+C+
Sbjct:  104 CDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENC--GYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCF 226          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.910e-20
Identity = 72/207 (34.78%), Postives = 97/207 (46.86%), Query Frame = 0
Query:   17 DCCPCTKYLSWSDDFVQEVWDMFCRDPSSGCLDPRVDMY-PNCTNGVIPDIGDEWCDAANNNERCLFDGGDCC------------GCTRASNESSFSLCVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCTNGQFVYCGSFGFSCVDPDVITKDANLCVELASPIPA---CPVELQSEWVVETHD 207
            DCC     +    D+  + +   C D  S CL   V    P+C    +  IGDE+CD+ NNN  C +DGGDCC            G    ++ S F  C+DP  A ++PT V     C  G  + IGDG C  +NNN  C YDGGDCC+C+C+      CG     C+DP       +   E + P P    C  E+Q  WVV+  +
Sbjct:  120 DCCE----MDCGGDYYCDTYRFDCSD--STCLSQTVVAENPDCAGDWLT-IGDEFCDSENNNPECAYDGGDCCADTCPLSIDSACGFDGFADYSGFD-CLDP--AFFDPTVVAEFPECT-GSWSMIGDGQCQEENNNPACGYDGGDCCICSCSG---TLCGGLA-DCLDPSA----GDEFYECSPPSPEALPCSAEVQQTWVVDEQE 307          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: D7FI82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI82_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 4.130e-18
Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   63 IPDIGDEWCDAANNNERCLFDGGDCCGCTR----ASNESSFSL-----CVDPGAACYNPT-AVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTC 155
            I  +GD  CD  NNNE C +DGGDCC CT     ++ E S S      C+DP A+C++    + +   C +   N IG+G+C+  NNN  C YDGGDCC CTC
Sbjct:   13 IASVGDGICDEENNNELCGYDGGDCCECTCVPSVSAGEYSVSCEYGFACIDPNASCFDKDFTLDMADNCYH---NSIGNGYCNCQNNNADCGYDGGDCCECTC 112          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: A0A6H5K4R2_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R2_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.400e-15
Identity = 49/117 (41.88%), Postives = 64/117 (54.70%), Query Frame = 0
Query:   82 FDGGDCCGCTRASNESSFS-----LCVDPGAACYNPTAVTVQ--STCINGRINYIGDGWCDADNNNKGCLYDGGDCCMCTCT--------NGQFVYCGSFG-FSCVDPDVITKDANL 182
            FDGGDCC CT    E +        C+DPGAAC +  AVTV     C +   + IG+G CD+  NN+ C YDGGDCC CTC         +G+    G +G F+C+DPD    D ++
Sbjct:    3 FDGGDCCECTCEDGEYTCGQYVGYACIDPGAACVDDDAVTVDMMENCYD--ASRIGNGACDSLLNNEECAYDGGDCCECTCDPSRYPWYDSGEGCQTGMYGGFACIDPDAPCVDDDI 117          
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 8.860e-13
Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 0
Query:  128 YIGDGWCDADNNNKGCLYDGGDCCMCTCTNGQFVYCGSFGFSCVDPDVITKDANLCVELASPIPACPVELQSEWVVE 204
            Y+ DGWCD +NNN  C +DGGDCC CTC + Q+  CG  GFSC+DP     D   C E  +  P C  E Q  WVVE
Sbjct: 1976 YVTDGWCDLENNNAECNWDGGDCCECTCVDSQYE-CGIQGFSCLDPSA--TDLYDCGETPAATP-CSAEAQEAWVVE 2048          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1063.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0S4_ECTSI8.250e-4442.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI6.040e-3641.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3F4_ECTSI1.170e-3442.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE3.700e-3439.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXR2_9PHAE2.460e-3238.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB04_9PHAE1.330e-2244.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI1.910e-2034.78Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FI82_ECTSI4.130e-1844.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4R2_9PHAE4.400e-1541.88LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FHG7_ECTSI8.860e-1350.65LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 40..88
e-value: 0.071
score: 9.9
coord: 114..151
e-value: 2.0E-4
score: 30.7
NoneNo IPR availableGENE3D3.30.300.320coord: 1..153
e-value: 1.1E-9
score: 40.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1063contigA-nodosum_M_contig1063:233037..233774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1063.7.1mRNA_A-nodosum_M_contig1063.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1063 232962..234406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1063.7.1 ID=prot_A-nodosum_M_contig1063.7.1|Name=mRNA_A-nodosum_M_contig1063.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=246bp
MCDSENSNEACAYDGGDCCPCTKYLSWSDDFVQEVWDMFCRDPSSGCLDP
RVDMYPNCTNGVIPDIGDEWCDAANNNERCLFDGGDCCGCTRASNESSFS
LCVDPGAACYNPTAVTVQSTCINGRINYIGDGWCDADNNNKGCLYDGGDC
CMCTCTNGQFVYCGSFGFSCVDPDVITKDANLCVELASPIPACPVELQSE
WVVETHDPGSSTGESCSMLWRVVPRHMERQGHSGRNNIDFQRNLC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom