prot_A-nodosum_M_contig106.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig106.10.1
Unique Nameprot_A-nodosum_M_contig106.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length159
Homology
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.250e-50
Identity = 80/141 (56.74%), Postives = 106/141 (75.18%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKH 157
            GFKL T++D+NW  NPD GKSTSSY+ +L N P+SF+  LQ LTA S MEAEL+ +A+ MK+++FC NM+TELGF + F  + VY DNT+ L   GN +FS R K+IALR+ F++ELV EGK++IH+  TE  LA +GTKH
Sbjct:   54 GFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKH 194          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 4.580e-49
Identity = 81/141 (57.45%), Postives = 107/141 (75.89%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKH 157
            GFKL T++D+NW  NPD GKSTSSY+ +L N P+SF+  LQ LTA S MEAEL+ +A+ MK+++FC NM+TELGF + F  + VY DNT+ L   GN +FS R K+IALR+ F++ELV EGK++IH+  TE  LAD+GTKH
Sbjct:  279 GFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKH 419          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 5.200e-48
Identity = 82/141 (58.16%), Postives = 109/141 (77.30%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKH 157
            GFKL T++D+NW  NPD GKSTSSY+ +L N P+SF+  LQ LTA S MEAEL+ +A+ MK+++FC NM+TELGF + F  + VY DNT+ L   GN +FS R K+IALR+ F++ELV EGK++IH+V+TE  LAD+GTKH
Sbjct:  839 GFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKH 979          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 3.380e-47
Identity = 81/141 (57.45%), Postives = 107/141 (75.89%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKH 157
            GFKL T++D+NW  NPD GKSTSSY+ +L N P+SF+  LQ LTA S MEAEL+ +A+ MK+++FC NM+TELG  + F  + VY DNT+ L   GN +FS R K+IALR+ F++ELV EGK++IH+V TE  LAD+GTKH
Sbjct:  500 GFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKH 640          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.110e-45
Identity = 80/141 (56.74%), Postives = 106/141 (75.18%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKH 157
            GFKL T++D+NW  NPD GKSTSSY+ +L N P+SF+  LQ LTA S MEAEL+ +A+ M +++F  NM+TELGF + F  + VY DNT+ L   GN +FS R K+IALR+ F++ELV EGK++IH+V TE  LAD+GTKH
Sbjct: 1508 GFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKH 1648          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 8.030e-44
Identity = 79/142 (55.63%), Postives = 107/142 (75.35%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKHL 158
            GF LT  +D NWG NPD  KS SSYI +++  P+SFK  LQSLTA S +EAEL+ AA+ MK+++FC NM+ ELGF   F S  +YI NT+ L V GN+TFS R K++ALR+ +++E+VKEG+++IH++ TE  LAD+GTKHL
Sbjct:  533 GFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHL 673          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.430e-42
Identity = 75/142 (52.82%), Postives = 105/142 (73.94%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKHL 158
            GFKLT +TD+NWG NPD GKSTSS++ +L + P++FK  LQSLT QS ME EL+ AA+ +K+++FC N++TELGF +    V +Y DNT+ L   GN ++S   K+IALR+ F++ELV EG++ IH+V  +   AD+GTKHL
Sbjct:  562 GFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHL 703          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 4.080e-41
Identity = 70/142 (49.30%), Postives = 105/142 (73.94%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKHL 158
            G KL T++++NW  NPD GKS+S Y+ +L N P+SFK  +Q  TA S MEAEL+ +A+ MK+++FC N++TELG  + F  V +Y DNT+ L   GN +FS R K+IALR+ +++EL+ EG+++IH++ T+  +AD+GTKHL
Sbjct: 1009 GSKLATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHL 1150          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 5.580e-41
Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = 0
Query:   14 RSSGFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQLADLGTKHL 158
            +S GFKL T++DTNW  NPD GKSTS Y  +L + P+S K  +Q   A S MEAEL+ +A+ MK+++FC NM+TELGF + F  V +Y DNT+ L   GN +FS R  +IALR+ +++ELV EG+++IH+V T+  LAD+GTK+L
Sbjct: 1034 KSEGFKLGTFSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYL 1178          
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Match: A0A6H5KCX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX7_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.750e-38
Identity = 82/217 (37.79%), Postives = 108/217 (49.77%), Query Frame = 0
Query:   17 GFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPLSFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLVYIDNTSALQVAGNETFSPRAKYIALRYV----------------------------------------------------------------------------FVQELVKEGKVTIHFVKTEQQLADLGTKH 157
            GFKL T++D+NW  NPD GKSTSSY+ +L N P+SF+  LQ LTA S MEAEL+ +A+ MK+++FC NM+TELGF + F  + VY DNT+ L   GN +FS R K+IALR+                                                                             F++ELV EGK++IH+V TE  LAD+GTKH
Sbjct:   25 GFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKH 241          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig106.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE1.250e-5056.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE4.580e-4957.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE5.200e-4858.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE3.380e-4757.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.110e-4556.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE8.030e-4455.63CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE1.430e-4252.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K129_9PHAE4.080e-4149.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE5.580e-4151.72Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KCX7_9PHAE1.750e-3837.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 21..158
e-value: 3.00532E-43
score: 137.985

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig106contigA-nodosum_M_contig106:358962..359977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig106.10.1mRNA_A-nodosum_M_contig106.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig106 358655..359977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig106.10.1 ID=prot_A-nodosum_M_contig106.10.1|Name=mRNA_A-nodosum_M_contig106.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=159bp
MRRTTISRTSASARSSGFKLTTYTDTNWGGNPDKGKSTSSYIGILTNGPL
SFKVNLQSLTAQSAMEAELMTAAIVMKKSLFCRNMVTELGFTEGFWSVLV
YIDNTSALQVAGNETFSPRAKYIALRYVFVQELVKEGKVTIHFVKTEQQL
ADLGTKHLK
back to top