prot_A-nodosum_M_contig1058.3.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1058.3.2
Unique Nameprot_A-nodosum_M_contig1058.3.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length910
Homology
BLAST of mRNA_A-nodosum_M_contig1058.3.2 vs. uniprot
Match: A0A6H5KZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ4_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 6.160e-182
Identity = 426/1022 (41.68%), Postives = 497/1022 (48.63%), Query Frame = 0
Query:    2 LSSPFGPPGARVGWKMRTRDAPQHVHRLLRAFAAAHDYAGAARSLATLHRLHDGFDPDVYRYTTALLRLAGDHRQTTMYFRKTVAKKTRAL-------SKESSLQGRAVAHDFLGYLADRRDYGEALSMIQDMLHASGFMNSGAFKNDPLLKAHGAILRLFAGLLEHENASVGCVDIEAGG-----------------------PPRIPGLQDPFALIERLRACKRGYRSGDAAGEEAQIDVGARARAWDHLRRARKLLRQAATGLPDNASIACYRAAMRAA-----GDGYVAALRQIARFVERNPGSVKARAFHARLLDRIIQNAQHT---------------------RKRVQD------GSATYNECGGEE--AMVQEVESDDGMLLAEVVRARALRGWLEADPLEPRAALGLAVIYLERSAAALGVADELFVVECLLQQLETH--GFPRTCAQSQGTAGARGVLYTSRAVLLLWSALADILGPLRVRDEPVPLISRSAGRAPPPSPP-----------RPGTIWDQAYGTDPPWAPTDFQRQDGFTCGGG-------------GQRSGRGTEGAGPEG--AELGPPAPHPLVRGVDQELWEETLLDPNADPLLGGPIDTPVGAPVGE------MWCSDDEDCVLGSESEAL--QEGARLASRRTGGCTYYCPPGG-------------DRDFAAWGIEERSQWVVKSDASSKLRPTDLQAIGGKEKGDHDTSAGKGNSALNEKTVTAMSTTSARSEGFEALAAFDSNGKAVEGSKRKPDGLQRLSRRGAVGGGDPSHALLEGGEEEEGKETVSGRRGASPEVLKMELPSQ--GSDQYHGEGGILEQGSELVKTAVGGTTXXXXXXXXXXXXEKGAFESKEALECGSIERWKSYSSLEDCQYDGLDESLSETDGENDSNPAADSAGDRSGGEGLHAAPSLREEEAPLGPPTGADPTAMELSETVAVQLPDEAAVRLLMNKLCVAAHVFGPQHPYCLRAIGRLCLDDVRDIARPARDALR 908
            ++SPFGPPGA   W +  RDAP+HVH LLRA  AAHDYAGAAR+LATLHRLH  FDPDVYRYT ALLRLAGDH++T+MYFRK + K+  A        S + S++GRA AHDFL YLADR+++ EAL + Q       F++ G FK DP LKAHGA+LRLF  LLEH+  S GC     G                        PP IPGLQDP +L+ RLRAC      G   G         +ARA +HLR A++LL QAATG P +ASIA YRAA  AA     G G  AALRQ+A FVERNPGSVK    HARLL+   + AQ                       R R Q       G A   + G E+  A   E E  DG+LL  V RARALRGWLEADPLEPRA L LA ++ E SAA +GVAD  FVV+ L+ QLET   G PR C        ARG L+T+RA   LW+ALAD+LGPLRVRDEPVP++ +S                     RPGTIWD  YG DPPWAPTDF    G   G G             GQ  G G  G G  G  + LG  +PHPL+RGVD ELWEET+LDP+A+PLL  P     G  VG       +WCSDDEDC           QE ARLASR TGGC Y+ P                +   AA     R  +   + A   L  T      G E+GDH                      +   EG                                                         R+GAS E           G+    G G       +L                       G   S+ A             +L+    DG  ES  E D                  E    AP LRE EAPLGPPTG D  A  LSETV+V+LP EAA  LL +K CVAAH+FGPQH YCLRAIGRLC +DVR+ ARPAR  LR
Sbjct:   94 IASPFGPPGASNTWSLSRRDAPEHVHLLLRALMAAHDYAGAARALATLHRLHSLFDPDVYRYTVALLRLAGDHQKTSMYFRKILGKRLLAGVFAPKGGSVQGSVRGRATAHDFLAYLADRQEFDEALDLSQ----GGSFLSHGPFKQDPSLKAHGAVLRLFVALLEHQACS-GCSYTSDGSSCAADFPAPSAGNAAAVSGRQRPPPLIPGLQDPLSLVGRLRACWVDCGGGGHGGSR-------QARALEHLRYAQRLLEQAATGSPGDASIAGYRAAATAASAASEGGGMPAALRQLAAFVERNPGSVKGHRLHARLLEMSRREAQXXXXXXXXXXXXXRLSLPQEEGRRDRGQGEGRDAIGGAGAQQAGAEKKAAGTAEEEDQDGLLLVGVARARALRGWLEADPLEPRAVLALAALHAEGSAAVVGVADRAFVVDGLVAQLETSCGGGPRPCPAP--AVDARGTLHTTRAATTLWTALADLLGPLRVRDEPVPVVRQSGXXXXXXXXXXXXXXXXXXXXRPGTIWDHLYGADPPWAPTDFVAARGRVVGSGLADGRAGVGGVLGGQAMGEG--GGGDRGGLSALGSYSPHPLLRGVDAELWEETVLDPDAEPLLLDP-----GGGVGGRGQDGCIWCSDDEDCXXXXXXXXXXXQERARLASRGTGGCVYFSPXXXXXXXXXXXXXXXXEERGAARTNSRRPFFETMTVAGIVLEGTAETQAAGSEEGDH----------------------ARNPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXRQGASAEXXXXXXXXXXXGAPGSSGRGRNRSNRRDLESE-----------DDDYEPESPGVARSRPA-------------NLKVEHDDGDQESEEEAD------------------EDYMTAPGLREAEAPLGPPTGTDAAATRLSETVSVKLPGEAAAWLLADKCCVAAHMFGPQHRYCLRAIGRLCREDVRETARPARAVLR 1025          
BLAST of mRNA_A-nodosum_M_contig1058.3.2 vs. uniprot
Match: D7FX89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX89_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 6.360e-60
Identity = 129/252 (51.19%), Postives = 158/252 (62.70%), Query Frame = 0
Query:    2 LSSPFGPPGARVGWKMRTRDAPQHVHRLLRAFAAAHDYAGAARSLATLHRLHDGFDPDVYRYTTALLRLAGDHRQTTMYFRKTVAKKTRAL-------SKESSLQGRAVAHDFLGYLADRRDYGEALSMIQDMLHASGFMNSGAFKNDPLLKAHGAILRLFAGLLEHE---------NASVGCVDIEAGGPPR-------------IPGLQDPFALIERLRACKRGYRSGDAAGEEAQIDVGARARAWDHLR 224
            ++SPFGPPGA   W +  RDAP+HVH LLRAF AAHDYAGAAR+LATLHRLH  FDPDVYRYT ALLRLAGDH++T+MYFRK + K+  A        S + S++GRA AHDFL YLADR+++ EAL + Q++L    F++ G FK DP LKAHGA+LRLF  LLEH+         + S    D  A                  IPGLQDP +L+ RLRAC     +G  A          +ARA +HLR
Sbjct:   94 IASPFGPPGASNTWSLSRRDAPEHVHLLLRAFMAAHDYAGAARALATLHRLHSLFDPDVYRYTVALLRLAGDHQKTSMYFRKILGKRLLAGVFAPKGGSVQGSVRGRATAHDFLAYLADRQEFDEALDISQNLLQGGSFLSHGPFKQDPSLKAHGAVLRLFVALLEHQVCSGRNDTSDGSSSATDAPAPXXXXXXXXXXXXXXXXLIPGLQDPLSLVGRLRACWIDCAAG--AXXXXXXXXXRQARALEHLR 343          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1058.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZZ4_9PHAE6.160e-18241.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX89_ECTSI6.360e-6051.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..706
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 792..847
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 661..711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1058contigA-nodosum_M_contig1058:19439..23727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1058.3.2mRNA_A-nodosum_M_contig1058.3.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1058 19279..23923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1058.3.2 ID=prot_A-nodosum_M_contig1058.3.2|Name=mRNA_A-nodosum_M_contig1058.3.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=910bp
MLSSPFGPPGARVGWKMRTRDAPQHVHRLLRAFAAAHDYAGAARSLATLH
RLHDGFDPDVYRYTTALLRLAGDHRQTTMYFRKTVAKKTRALSKESSLQG
RAVAHDFLGYLADRRDYGEALSMIQDMLHASGFMNSGAFKNDPLLKAHGA
ILRLFAGLLEHENASVGCVDIEAGGPPRIPGLQDPFALIERLRACKRGYR
SGDAAGEEAQIDVGARARAWDHLRRARKLLRQAATGLPDNASIACYRAAM
RAAGDGYVAALRQIARFVERNPGSVKARAFHARLLDRIIQNAQHTRKRVQ
DGSATYNECGGEEAMVQEVESDDGMLLAEVVRARALRGWLEADPLEPRAA
LGLAVIYLERSAAALGVADELFVVECLLQQLETHGFPRTCAQSQGTAGAR
GVLYTSRAVLLLWSALADILGPLRVRDEPVPLISRSAGRAPPPSPPRPGT
IWDQAYGTDPPWAPTDFQRQDGFTCGGGGQRSGRGTEGAGPEGAELGPPA
PHPLVRGVDQELWEETLLDPNADPLLGGPIDTPVGAPVGEMWCSDDEDCV
LGSESEALQEGARLASRRTGGCTYYCPPGGDRDFAAWGIEERSQWVVKSD
ASSKLRPTDLQAIGGKEKGDHDTSAGKGNSALNEKTVTAMSTTSARSEGF
EALAAFDSNGKAVEGSKRKPDGLQRLSRRGAVGGGDPSHALLEGGEEEEG
KETVSGRRGASPEVLKMELPSQGSDQYHGEGGILEQGSELVKTAVGGTTS
RKRRRSLLEEEEKGAFESKEALECGSIERWKSYSSLEDCQYDGLDESLSE
TDGENDSNPAADSAGDRSGGEGLHAAPSLREEEAPLGPPTGADPTAMELS
ETVAVQLPDEAAVRLLMNKLCVAAHVFGPQHPYCLRAIGRLCLDDVRDIA
RPARDALRR*
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