prot_A-nodosum_M_contig1053.43.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1053.43.1
Unique Nameprot_A-nodosum_M_contig1053.43.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length121
Homology
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: D8LTG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTG6_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.460e-63
Identity = 96/104 (92.31%), Postives = 101/104 (97.12%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNAG 117
            Q+DRFMRIKNS WRKPKGIDGRVRRRFKG + MPN+GYGSDKRTRN+LPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAG+LHIRVTNAG
Sbjct:   24 QTDRFMRIKNSSWRKPKGIDGRVRRRFKGCLPMPNVGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAG 127          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: A0A835YGQ7_9STRA (Ribosomal protein L32e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGQ7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 6.060e-56
Identity = 86/103 (83.50%), Postives = 99/103 (96.12%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            QS+RF+RI+NS WR+PKGIDGRVRR+FKGAI MPNIGYGS+K+TRN+LPNGFYKFLVHNVK+LELL+MHNRKYAAEIAHNVS+RKRKEIVERA +L I+VTNA
Sbjct:   24 QSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNA 126          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: A0A7S2XAB1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAB1_9EUKA)

HSP 1 Score: 168 bits (426), Expect = 6.710e-52
Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            QSDRF RI +S WR+PKGID RVRR+FKGAI M N+GYGS+K+TRNLLPNGFYKFLVHNVKELELL+MHNRKY AE+AH VSS+KRKEIVERA +L I+VTNA
Sbjct:    8 QSDRFKRIADSSWRRPKGIDSRVRRKFKGAIPMANVGYGSNKKTRNLLPNGFYKFLVHNVKELELLMMHNRKYCAEVAHAVSSKKRKEIVERADQLGIKVTNA 110          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: W7T4V3_9STRA (Ribosomal protein l32 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4V3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 5.430e-50
Identity = 79/103 (76.70%), Postives = 92/103 (89.32%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            Q+DRFMRI  + WRKPKGIDGR RRRFKG+  MPNIGYGSD +TRNLLPNGFYKF+V+N KE+ELLL+HNRKY+AEIAHNVSSRKRK IVE+A +L ++VTNA
Sbjct:   25 QADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNA 127          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: A0A7S2AJK5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJK5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.940e-49
Identity = 81/101 (80.20%), Postives = 87/101 (86.14%), Query Frame = 0
Query:   15 SDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTN 115
            S+RFMRIKNS WRKPKGID  VRRRFKG I M  IGYGSDKRTRN LPNGF KFLV NV +LELL+MHN+KY AEIAHNVSS+KRKEIVERA  LHI+VTN
Sbjct:   24 SNRFMRIKNSNWRKPKGIDSSVRRRFKGTIPMVKIGYGSDKRTRNTLPNGFLKFLVSNVAQLELLMMHNKKYCAEIAHNVSSKKRKEIVERAQELHIKVTN 124          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: A0A6S9KJY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KJY2_HETAK)

HSP 1 Score: 160 bits (406), Expect = 1.230e-48
Identity = 80/103 (77.67%), Postives = 90/103 (87.38%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            QSD+FMRI  S WRKPKGID RVRRRFKG I MP IGYGS+K+TRN+LPNGF KFLV+NV ELELL+MHNRKY AEIAHNVS++KRK+IV RA +L IRVTNA
Sbjct:   24 QSDQFMRIGKSSWRKPKGIDSRVRRRFKGTIPMPKIGYGSNKKTRNVLPNGFLKFLVNNVAELELLMMHNRKYCAEIAHNVSAKKRKDIVTRAEQLGIRVTNA 126          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: M2W9S0_GALSU (60S ribosomal protein L32 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W9S0_GALSU)

HSP 1 Score: 160 bits (405), Expect = 1.590e-48
Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0
Query:    8 KEVRSAQSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            K+ +  QSDRF R+K + WRKPKGID RVRRRFKG+  MPNIGYGSDKRTR LLPNGFYKFLV+NVKELE LLM NRKYAAEIAH VS++KRKEI+ERA  L+I+VTNA
Sbjct:   16 KKFKRFQSDRFKRVKEN-WRKPKGIDCRVRRRFKGSTLMPNIGYGSDKRTRYLLPNGFYKFLVNNVKELEALLMLNRKYAAEIAHGVSAKKRKEILERAAELNIKVTNA 123          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: A0A7S2B874_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B874_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.500e-48
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 0
Query:   15 SDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            S+RFMRI+NS WRKPKGID  VRRRFKG I M  IGYGSDK+TRNL+PNGFYKF V NV +LE+L+MHNRKY AEIAHNVS++KRKEIVERA +L+I+V+NA
Sbjct:   44 SNRFMRIENSSWRKPKGIDSSVRRRFKGTIPMAKIGYGSDKKTRNLMPNGFYKFAVSNVDQLEMLMMHNRKYCAEIAHNVSTKKRKEIVERAAQLNIKVSNA 145          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: M4C135_HYAAE (Uncharacterized protein n=12 Tax=Oomycota TaxID=4762 RepID=M4C135_HYAAE)

HSP 1 Score: 159 bits (403), Expect = 7.690e-48
Identity = 77/102 (75.49%), Postives = 93/102 (91.18%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTN 115
            QS+RF R+  S WR+PKGIDGRVRR+FKGAI MPN+GYGS+K+TR+LLPNGFYKF+V+NV ELE+LLMHNRKY AEIAHNVS RKR+EI+ERA +L++RVTN
Sbjct:   24 QSNRFKRVPES-WRRPKGIDGRVRRKFKGAIKMPNVGYGSNKKTRHLLPNGFYKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTN 124          
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Match: A0A4P9XXJ7_9FUNG (60S ribosomal protein L32 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXJ7_9FUNG)

HSP 1 Score: 157 bits (397), Expect = 2.710e-47
Identity = 79/103 (76.70%), Postives = 93/103 (90.29%), Query Frame = 0
Query:   14 QSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIGYGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGRLHIRVTNA 116
            QSDRF+R+ ++ WRKPKGID RVRRRFKG IAMPNIGYGS+K+TR+L+PNGF KFLV NVKEL+LL+M NR YAAEIAHNVSSRKR +IVERA +L+I+VTNA
Sbjct:   24 QSDRFLRV-DASWRKPKGIDNRVRRRFKGQIAMPNIGYGSNKKTRHLMPNGFKKFLVSNVKELDLLMMQNRTYAAEIAHNVSSRKRIQIVERAAQLNIKVTNA 125          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1053.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTG6_ECTSI1.460e-6392.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGQ7_9STRA6.060e-5683.50Ribosomal protein L32e n=1 Tax=Tribonema minus Tax... [more]
A0A7S2XAB1_9EUKA6.710e-5279.61Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
W7T4V3_9STRA5.430e-5076.70Ribosomal protein l32 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S2AJK5_9STRA2.940e-4980.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6S9KJY2_HETAK1.230e-4877.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M2W9S0_GALSU1.590e-4876.1560S ribosomal protein L32 n=1 Tax=Galdieria sulphu... [more]
A0A7S2B874_9STRA4.500e-4875.49Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
M4C135_HYAAE7.690e-4875.49Uncharacterized protein n=12 Tax=Oomycota TaxID=47... [more]
A0A4P9XXJ7_9FUNG2.710e-4776.7060S ribosomal protein L32 n=1 Tax=Thamnocephalis s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 7..115
e-value: 3.7E-64
score: 229.1
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 8..115
e-value: 4.5E-48
score: 162.1
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 8..116
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 14..115
e-value: 2.46729E-56
score: 168.477
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 7..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1053contigA-nodosum_M_contig1053:268764..269126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1053.43.1mRNA_A-nodosum_M_contig1053.43.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1053 268747..269126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1053.43.1 ID=prot_A-nodosum_M_contig1053.43.1|Name=mRNA_A-nodosum_M_contig1053.43.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bp
MWSGEANKEVRSAQSDRFMRIKNSGWRKPKGIDGRVRRRFKGAIAMPNIG
YGSDKRTRNLLPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRK
EIVERAGRLHIRVTNAGQAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR036351Ribosomal_L32e_sf