prot_A-nodosum_M_contig1053.25.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1053.25.1
Unique Nameprot_A-nodosum_M_contig1053.25.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length258
Homology
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BLAST of mRNA_A-nodosum_M_contig1053.25.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.460e-58
Identity = 130/243 (53.50%), Postives = 152/243 (62.55%), Query Frame = 0 
Query:   34 IDACLRRWKAARHDGQAVLARLSNALLLRTYVDEARGGSVSGNIXXXISGGGAHVWGALASAGTSVSRVALATEARVRRLHGDLSALQDAMVAAAAGVRRHAQEARHQCKPFSAGEDAALDVCAAPSSTPAGGKRGIKAASTTGLTIL-----------------------VGGGYAMEDVANAALEVSEMLLQEALVTATVTRGVGE--CQDDRNALTVYAAAWMMQPYLDARRLRELEVMV 251
            ID CLRRWKAARH+GQAVL  LSNALLLRTYVD+   G      X   + G   VWGALA AGT+VSRV++ATE R RRLHGDLSALQDAMVAAA  +RRHA+E R +     AG +             +G   G KA                                VGGGYA+ DVA+   +V+EML++EALVTATV +GVG+   +DDR ALTVYAAAWMMQPY+DA RL+ELEVMV
Sbjct:   30 IDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDK---GXXXXXXXRAATDGA--VWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGE---------DHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMV 258
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BLAST of mRNA_A-nodosum_M_contig1053.25.1 vs. uniprot
Match: A0A835ZE08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE08_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.010e-6
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 0 
Query:  184 GGYAMEDVANAALEVSEMLLQEALVTATVTRGVGECQDDRNALTVYAAAWMMQPYLDARRLRELEVMVEA 253
            GGY+  D+A AAL +  ML +E  V   V    G+C   R+ LT+YAAAWMMQPY++    ++L  M E 
Sbjct:  116 GGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSS-RDTLTLYAAAWMMQPYMERGLWKDLLRMTET 184
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.25.1 vs. uniprot
Match: A0A835ZCP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.680e-5
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:  184 GGYAMEDVANAALEVSEMLLQEALVTATVTRGVGECQDDRNALTVYAAAWMMQPYLDAR 242
            GGY+  D+A AAL +  ML +E  V   V    G+C   R+ LT+YAAAWMMQP +  R
Sbjct:   95 GGYSAADIAQAALALGRMLKREVAVAEAVCADAGDCSS-RDTLTLYAAAWMMQPTISKR 152
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1053.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI2.460e-5853.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZE08_9STRA1.010e-644.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCP9_9STRA2.680e-547.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1053contigA-nodosum_M_contig1053:191529..192302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1053.25.1mRNA_A-nodosum_M_contig1053.25.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1053 191107..193627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1053.25.1 ID=prot_A-nodosum_M_contig1053.25.1|Name=mRNA_A-nodosum_M_contig1053.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=258bp
MSSLREATDRTADSPGQTAEGDTNDVVGDILAGIDACLRRWKAARHDGQA
VLARLSNALLLRTYVDEARGGSVSGNISGDISGGGAHVWGALASAGTSVS
RVALATEARVRRLHGDLSALQDAMVAAAAGVRRHAQEARHQCKPFSAGED
AALDVCAAPSSTPAGGKRGIKAASTTGLTILVGGGYAMEDVANAALEVSE
MLLQEALVTATVTRGVGECQDDRNALTVYAAAWMMQPYLDARRLRELEVM
VEARRRN*
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