prot_A-nodosum_M_contig1053.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1053.13.1
Unique Nameprot_A-nodosum_M_contig1053.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length136
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.13.1 vs. uniprot
Match: D8LKJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ3_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.950e-8
Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 0 
Query:    4 QTHREVVEGEKMDLERRAQRLARRIEEERTLKETERLAHESGIRAIRAQWKEEFQTVDDRVRSVISAKDEAMNGLAEELETARQRAETAETLLEELQLGIC 104
            QT    V+  K DLE+RA+RLARR+EE++   E ER AH S +  ++AQ                     A+  L + L+++RQRAETAE LLEELQ GIC
Sbjct:  289 QTQNAAVKELKEDLEKRARRLARRLEEDKASHEKEREAHASELLTVKAQ---------------------AIERLTDGLKSSRQRAETAEALLEELQRGIC 368
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1053.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKJ3_ECTSI1.950e-843.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..102
NoneNo IPR availableCOILSCoilCoilcoord: 7..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1053contigA-nodosum_M_contig1053:129329..130436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1053.13.1mRNA_A-nodosum_M_contig1053.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1053 128810..146701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1053.13.1 ID=prot_A-nodosum_M_contig1053.13.1|Name=mRNA_A-nodosum_M_contig1053.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
MDVQTHREVVEGEKMDLERRAQRLARRIEEERTLKETERLAHESGIRAIR
AQWKEEFQTVDDRVRSVISAKDEAMNGLAEELETARQRAETAETLLEELQ
LGICSVASSPSRESRKFRRYRPHPPTIRCVVSADR*
back to top