prot_A-nodosum_M_contig105.45.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig105.45.2
Unique Nameprot_A-nodosum_M_contig105.45.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length496
Homology
BLAST of mRNA_A-nodosum_M_contig105.45.2 vs. uniprot
Match: D7FQD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD3_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 4.760e-140
Identity = 301/454 (66.30%), Postives = 353/454 (77.75%), Query Frame = 0
Query:   55 KLSSITREPDPPDQT---SAIEAAKRGIGILREREHDLQQDDAMEALRCLLHAACAESVPSEVYLALGDLHYTWGNLLESGRKAELGAEGAAKAVISEIKELRRQSLKKRRLAPASGGGRGLEQRKGGQDTA--------------------AVAGAEAIPSGTAYPEAWEWYIKAANQGDSRAMMQLGDIALEAGKTSTINAQHAEEWFRRASRGDPPQPDALFQLARIRHEGIGVSSDPVFAREMYPKACDAGSSAAAFFLGHCFHVGNDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHGEDGFARDPRAAFRCYSAAAELGHADASYCLGVMHYTMGNFQDAFACYQTATDRGNILAWRSLASMYALGEGVPRSEQMAKTILATFGDKIKQQERENRGKDGDGDE 485
            +LSS+TR P   + T   +A EAA++G+ ILRER   L+QDDA+EA R LL AACAE+VP +VY ALG+LHY WG LLE G++AELGAEGAAKAV++EIK+LR+Q++KKR+LAP S G +G   +   + T                     A  G    P    YPEAWEWY+KAA  GD+RAMMQLGDIALEA   S  NAQHAEEW+R+A+ G+PPQPDA FQ+ARI HEGIG   DP  ARE+Y +A  AGSSAAA+FLG  FHVG++DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    FHGEDGFARDPRAAFRCYS+AA+ GHADASYCLGVM Y MG+ ++AF  YQTA + GN+LAWR+LA+MYALGEGV RSEQMAK ILATFGD+I+++E+E +    DG+E
Sbjct:   49 RLSSVTRPPSEHEHTDPAAAREAAEQGLRILRERSESLEQDDAVEAWRLLLKAACAETVPPDVYFALGNLHYIWGELLEFGKRAELGAEGAAKAVVAEIKDLRKQAMKKRQLAPGSFGSKGRAGKSPTKTTRMSDVSARGNDGRVLSVGAREAGGGRGTTPPEVDYPEAWEWYLKAALSGDTRAMMQLGDIALEAKTKSAGNAQHAEEWYRKAAVGNPPQPDACFQMARIHHEGIGAPCDPTRARELYDEALQAGSSAAAYFLGQRFHVGDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAFFHGEDGFARDPRAAFRCYSSAADDGHADASYCLGVMQYAMGDAEEAFRRYQTAAEAGNVLAWRNLAAMYALGEGVARSEQMAKNILATFGDEIERREKEEKRAAKDGEE 502          
BLAST of mRNA_A-nodosum_M_contig105.45.2 vs. uniprot
Match: A0A835YR63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR63_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.120e-23
Identity = 103/277 (37.18%), Postives = 129/277 (46.57%), Query Frame = 0
Query:  222 IALEAGKTSTINAQHAEEWFRRASRGDPPQPDALFQLARIRHEGIG-VSSDPVFAREMYPKACDAGSSAAAFFLGHCFHVGNDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFH-GEDGFARDPRAAFRCYSAAAELG-----------------HADASYCLGVMHY----TMGNFQDAFACYQTATDRGNILAWRSLASMYALGEGVPRSEQMAKTILATFGDKIKQQERE 475
            +A++    S  N   AE W+ RA+ G PP PDALFQLAR+ HEG+G    DPV A E+Y +A   GSSAA F LGH   VG+ +                          XXXXXXXXXXXXXXXXXXXX                          +  G  G  R    A   +  A                     HA+A+YC  VM Y       + + AF  YQTA + G++LAWR +ASM+ LGEGVPR E  A+ I+   G  I + E+E
Sbjct:    1 MAMQDPGESAANTPFAEHWYLRAAAGAPPLPDALFQLARVYHEGLGPAGEDPVRALELYQRAAAEGSSAALFLLGHAHSVGDAELGLPRDARAALAYLQRSADIDEHPEAXXXXXXXXXXXXXXXXXXXXEGRYVELVARAAAAGSANALFAEGDLWRRGLAGRERSEEKALHWFELAXXXXXXXXXXXXXXXXXXXXXHAEAAYCAAVMRYHGWGCDKDLRAAFELYQTAAEAGHVLAWREVASMHMLGEGVPRCEATARHIMQVMGKAIHKAEQE 277          
BLAST of mRNA_A-nodosum_M_contig105.45.2 vs. uniprot
Match: A0A7R9UGA6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.500e-10
Identity = 74/243 (30.45%), Postives = 114/243 (46.91%), Query Frame = 0
Query:   90 QQDDAMEALRCLLHAACAESVPS------EVYLALGDLHYT--WGNLL---ESGRKAELGAEGAAKA-VISEIKELRRQSLKKRR--LAPASGGGRGLEQRKGGQDTAAVAGAEAIPSGTA-YPEAWEWYIKAANQGDSRAMMQLGDIALEAGKTS----TINAQHAEEWFRRASRGDPPQPDALFQLARIRHEGIG-----------VSSDPVFAREMYPKACDAGSSAAAFFLGHCFHVGN 302
            Q+D + EA+     AA  E VP+      EV   LG L+    +  +L   + G   E   + A  A V+ +IK+LR+ + + RR      + G  G +Q K G   +  A A  I +G   + +AW W   AA +G + AM++LG+I +E         T N + AE+W+ RA+    P  DA++ LA++ HEG             +SSD V AR    +A   G   A  ++ H   VG+
Sbjct:    3 QEDPSAEAMAAA-KAALLEVVPARRDADAEVAYVLGALYLKQPFDPVLAKPKGGDDPEKDDDMAPHAKVLRDIKDLRKAAARARRDRFRRVTQGNEGAKQ-KDGVLVSKSASASPIRAGVGDFFQAWRWLQIAAFRGHTGAMVRLGNICIENVSDDRSGGTYNVRLAEKWYIRAAAAPSPIADAMYNLAKLYHEGFQAEDGSGEIREILSSDSVRARFWLDRAAQHGDPTACLWMAHAARVGD 243          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQD3_ECTSI4.760e-14066.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YR63_9STRA1.120e-2337.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UGA6_9STRA5.500e-1030.45Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 288..326
e-value: 5.8E-4
score: 29.2
coord: 435..467
e-value: 85.0
score: 5.6
coord: 403..434
e-value: 58.0
score: 7.0
coord: 327..365
e-value: 22.0
score: 10.7
coord: 252..287
e-value: 0.65
score: 19.0
coord: 366..402
e-value: 9.3E-9
score: 45.1
coord: 213..249
e-value: 33.0
score: 9.2
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 213..246
e-value: 0.072
score: 13.8
coord: 252..287
e-value: 0.046
score: 14.4
coord: 288..326
e-value: 1.5E-4
score: 22.4
coord: 327..351
e-value: 16.0
score: 6.4
coord: 198..212
e-value: 0.4
score: 11.4
coord: 366..402
e-value: 2.1E-5
score: 25.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 72..477
e-value: 2.5E-60
score: 206.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..183
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 329..463
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 197..341
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 197..341
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 329..463
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 310..460
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 197..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:550328..559200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.45.2mRNA_A-nodosum_M_contig105.45.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig105 549538..559245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig105.45.2 ID=prot_A-nodosum_M_contig105.45.2|Name=mRNA_A-nodosum_M_contig105.45.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=496bp
MWRVYATGATVVRWAVKAPSQLSIGCWHLHSCSRKVAVRGRSPTHRSVLI
CVSRKLSSITREPDPPDQTSAIEAAKRGIGILREREHDLQQDDAMEALRC
LLHAACAESVPSEVYLALGDLHYTWGNLLESGRKAELGAEGAAKAVISEI
KELRRQSLKKRRLAPASGGGRGLEQRKGGQDTAAVAGAEAIPSGTAYPEA
WEWYIKAANQGDSRAMMQLGDIALEAGKTSTINAQHAEEWFRRASRGDPP
QPDALFQLARIRHEGIGVSSDPVFAREMYPKACDAGSSAAAFFLGHCFHV
GNDDLGIEKQGARALQLLRRAAEQGHADAMFYLAQAYRSGAPELDIPKNL
HKFGEMVQEAAQAGSADAMFALGGAYFHGEDGFARDPRAAFRCYSAAAEL
GHADASYCLGVMHYTMGNFQDAFACYQTATDRGNILAWRSLASMYALGEG
VPRSEQMAKTILATFGDKIKQQERENRGKDGDGDEGPQGDAHPAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf