prot_A-nodosum_M_contig1047.22.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1047.22.3
Unique Nameprot_A-nodosum_M_contig1047.22.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length91
Homology
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BLAST of mRNA_A-nodosum_M_contig1047.22.3 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 6.460e-22
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0 
Query:    1 MATLDEPTLAAALRKTVEGGSRLENVWNLQMAAEISAKPELATMPGMRKIARQLGFSTGGGDQEAGGDTRERESESGDDDGQPDAGSIARQ 91
            M TLDEP LAA L KTVE G RLE +WN  M+A ISA PELATMPGM+K+ARQLGF TG  +++  G    +ES+  DD GQPD  SIARQ
Sbjct:  327 METLDEPKLAAELSKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGAAEEDDVG-RGGQESDEDDDYGQPDTASIARQ 416
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BLAST of mRNA_A-nodosum_M_contig1047.22.3 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.310e-21
Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 0 
Query:    1 MATLDEPTLAAALRKTVEGGSRLENVWNLQMAAEISAKPELATMPGMRKIARQLGFSTGGGDQE---AGGDTRERESESGDDDGQPDAGSIARQ 91
            M TLDEP LAA L KTVE G RLE +WN  M+A ISA PELATMPGM+K+ARQLGF TG  +++    GG    +ES+  DD GQPD  SIARQ
Sbjct: 1798 METLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLGFDTGTAEEDDIGRGG----QESDEDDDYGQPDTASIARQ 1887
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.22.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3E5_9PHAE6.460e-2262.64Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G6R7_ECTSI2.310e-2161.70Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1047contigA-nodosum_M_contig1047:145943..147134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1047.22.3mRNA_A-nodosum_M_contig1047.22.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1047 145935..147134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1047.22.3 ID=prot_A-nodosum_M_contig1047.22.3|Name=mRNA_A-nodosum_M_contig1047.22.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=91bp
MATLDEPTLAAALRKTVEGGSRLENVWNLQMAAEISAKPELATMPGMRKI
ARQLGFSTGGGDQEAGGDTRERESESGDDDGQPDAGSIARQ
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